Details from NCBI annotation

Gene Symbol Arhgap39
Gene Name Rho GTPase activating protein 39, transcript variant X1
Entrez Gene ID 101706172

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGAP39 ENSCPOG00000015486 (Guinea pig)

Gene Details

Rho GTPase activating protein 39

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013965, Guinea pig)

Protein Percentage 97.48%
CDS Percentage 93.97%
Ka/Ks Ratio 0.04167 (Ka = 0.0116, Ks = 0.2791)

ARHGAP39 ENSG00000147799 (Human)

Gene Details

Rho GTPase activating protein 39

External Links

Gene Match (Ensembl Protein ID: ENSP00000366522, Human)

Protein Percentage 90.99%
CDS Percentage 87.63%
Ka/Ks Ratio 0.04608 (Ka = 0.0409, Ks = 0.8885)

Arhgap39 ENSMUSG00000033697 (Mouse)

Gene Details

Rho GTPase activating protein 39

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036697, Mouse)

Protein Percentage 91.77%
CDS Percentage 85.56%
Ka/Ks Ratio 0.04867 (Ka = 0.0423, Ks = 0.87)

Arhgap39 ENSRNOG00000016566 (Rat)

Gene Details

Rho GTPase activating protein 39 (Arhgap39), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051450, Rat)

Protein Percentage 92.04%
CDS Percentage 85.62%
Ka/Ks Ratio 0.04964 (Ka = 0.0419, Ks = 0.8449)

Genome Location

Sequence Coding sequence

Length: 3339 bp    Location: 12290494..12334388   Strand: +
>XM_004837666.1
ATGTCCCAGACACAGGATTACGAGTGCAGGAGCCATCATGTTGATGGGCAGGAGTCCAGGATTCCAGGATCAAGTACCAGGCTGGAGTGGGTGGAGATCATCGAGCCACGCACCCGAGAGCGCATGTATGCCAACCTGGTCACAGGCGAGTGTGTGTGGGACCCCCCAGCCGGCGTGCGCATCAAGCGCACCAGTGAGGACCAGTGGTGGGAGCTCTTCGACCCCAACACCTCGCGCTTCTACTACTACAGCGCCGCCTCGCAGCGCACGGTGTGGCACCGCCCACAGAACTGCGATATCATCCCGCTGGCCAAGCTGCAGACGCTGAAGCAGAATACCGAATCCCCACGAGCCTCAGCGGACAGCAGCCCAGGCCGCGGCAGCCGTGAAGGCAGCACTGGCTCCTCGTTGGAGCCCGAGCCCGATGCCGTCACTGAGAGGGTGCAAGAGCTGCCAGCCAGGGCCGGGCGGCAGGTGGCGCTGGGAAGCGCCCGGGAAGAGAGCAGCAGCTCCTCCCCACCAGGCATGCTCCTTGAGAAGGACTGTGAAGTTTACCGTGATTACAGTGTGGATGGCCAGCTCCTTCACTACAGGACGTCCTCCCTCCGGTGGAACTCTGGCACCAAGGAGCGCATGCTCATCAAGGTCCCTGACCGAGAGCCCAGCTTCCTTGCCCCTCAGGGAAATGGCTACCCACTGGAAGGCCAGCCTGGGGGCCGCCCCCGCAGACCCTCTGGCAGCCAGCACTCACCCAACCTGCAGACATTCACCTCTGATGCAGACGGCACTGTCTTCTTCCCAGAGAGGCGGCCCTCACCTTTCCTGAGGAGAGCTGAGCTCCCTGGGAGCTGCTCCCCGATGCTTGCACAGTCCCGGAAGGCCTCCAGTGACTCACAGCCCTCCTCCCCACGCTATGGCTATGAGCCTCCACTCTATGAGGAGCCACCTGTTGAGTACCAGGCTCCCATCTATGATGAGCCCCCCATGGACATGCAGTTCGAGGTCAGTGGCCCCTACCAGGCTGGCTCCCCGCAGAGGTCACCAGGCCGAAAGCCCCGCCCATTCCTGCCCACCACCAAGCAGGCCCCTGCTTCACCCTGCCAGCAGCTGGTGCGCACCAAGCAAAGGTGCCCTGAGCGCTTCCTGAGCCTGGAGTACAGCCCTGCAGGCAAGGAGTATGTCCGCCAGCTAGTGTATGTGGAACAGGCAGGCTCCAGCCCCAAGCTGCGCTCTGGGCCCCGGCACAAATATGCACCCAACCCAGGTGGTGGCTCCTACTCCCTGCAGCCGAGCCCCTGCCTGCTGAGGGACCAGCGCCTGGGAATCCTGTCTGGAGACTACAGCACCATGGAGGGGCCTGAGCCACGACACAGCCAGCTGCCCACACCACTGCCACAGGCCCAGGAGGATGCCATGTCCTGGTCCAGCCAACAGGACACCATGTCCTCGACAGGCTACTCCCCAGGCACACGCAAGAGGAAGAGCAGAAAGCCCTCTCTGTGCCAAGCCCCCAGTACCTCTGCTGATGGCCCAGGGGACCTGATGAGCGAGCAGCCCCTGGCCGAGGAGCACTCCCCATGCGGGCCCAGCCTTGCCCAGGTGAAGCGTGCAGAGGCTGAGGCAGATGCTGCACGGGGTGCAGCTGAGCCCTTCCTGGCACAGGCACGGCTGGCTTGGGAGGCGCAGCAGGTCCACTTCCACATGAAGCAGAGGGGCAGCTGGGACTCCCAGCAGGATGGCTCAGGCTACGAGAGCGATGGTGCTGTGCCACTGCCCATGCCAGGGCCTGTGGTGCGTGCCTTCAGCGAGGATGAGGCACTGGCCCAGCAGGAGAGCAAGCACTGGAAGCGGGGCACCTTTGAGAAGCTGGGCTTCCCCCAGGTCCTGCTGGAGAAGAGCGTCTCTGTGCAGACTAACCTGGCCTCCCCGGAGCCTTACCTCCACCCCTCCCAGTCTGAGGACCTCGGTGCCTGTGCCCAGTTTGAGAGCAGCCGGCAGAATCGCAACGCAGTGCCCAGCTCCAGCTGTGTCTTCCCCACCTTCACACTACGTAAGCCGTCCTCAGAAACAGACATTGAAAACTGGGCCTCCAAGCATTTCAACAAGCACACCCAGGGCCTCTTCCGACGGAAAGTGTCCATCGCCAACATGCTAGCCTGGAGCAGCGAGTCCATCAAGAAGCCCATGATTGTGACCAGCGACCGACATGTGAAGAAGGAGGCTTGTGAGATCTTCAAGCTGATTCAGATGTACATGGGTGACCGGCGGGCCAAGGCTGACCCTCTGCACGTGGCTCTGGAGATTGCCACCAAGGGCTGGAGCATGCAAGGCCTTCGGGATGAGCTCTACATCCAGCTGTGCCGCCAAACCACTGAGAACTTCCGCCTCGAGAGCCTGGCCCGTGGCTGGGAGCTTATGGCCATCTGCCTGGCCTTCTTCCCACCCACACCCAAGTTCCATTCCTACCTGGAGGGCTACATCTACCGCCACATGGACCCCGTCAATGACACCAAAGTGACACAGCACATAAAAGAGCTCCTGGAAAGGAACACTAAGAAGAAGTCCAAATTGAGAAAGAAACCCAAGCCTTATGTTGAAGAGCTGGATGGGGTGGCGATAAGCACCTATGCCAAGTACTGTTACCACAAGCTGCAGAAGGCGGCCCTGACAGGGGCCAAGAAGGGGCTGAAGAAGCCCAACGTGGAGGAGATACGGCATGCCAAGAATGCTGTGTTCAGCCCATCCATGTTTGGCAGCTCACTGCAAGAAATCATGAGCATGCAGAAGGAGCGCTACCCTGACAGGCAGCTGCCTTGGGTACAAACGCGGCTCTCCGAGGAGGTGCTGGCACTCAATGGTGACCAGACGGAGGGCATCTTCAGGGTACCTGGGGACATTGATGAGGTGAATGCTCTGAAGCTGCAGGTGGATCAGTGGAAGGTGCCTACAGGCCTGGAGGACCCCCACGTCCCTGCGTCGCTGCTGAAGCTGTGGTATCGGGAACTGGAAGAGCCCTTGATTCCGCACGAGTTCTATGAGCAGTGCATCGCACACTATGAGAGCCCTGAGGCTGCAGTGGCAGTGGTGCACGCTCTGCCCCGCATCAACCGCATGGTGCTGTGCTACCTCATCCGATTCCTCCAGGTGTTTGTGCAGCCCGCCAATGTGGCCATCACCAAGATGGACGTCAGCAACCTCGCCATGGTGATGGCGCCCAACTGCCTACGCTGCCAGTCAGACGACCCCCGCGTCATCTTTGAGAACACGCGCAAGGAGATGTCCTTCCTGCGTGTGCTAATCCAGAACCTGGACACCAGCTTCATGGAGGGTGTGCTATAG

Related Sequences

XP_004837723.1 Protein

Arhgap39 PREDICTED: rho GTPase-activating protein 39 isoform X1 [Heterocephalus glaber]

Length: 1112 aa      View alignments
>XP_004837723.1
MSQTQDYECRSHHVDGQESRIPGSSTRLEWVEIIEPRTRERMYANLVTGECVWDPPAGVRIKRTSEDQWWELFDPNTSRFYYYSAASQRTVWHRPQNCDIIPLAKLQTLKQNTESPRASADSSPGRGSREGSTGSSLEPEPDAVTERVQELPARAGRQVALGSAREESSSSSPPGMLLEKDCEVYRDYSVDGQLLHYRTSSLRWNSGTKERMLIKVPDREPSFLAPQGNGYPLEGQPGGRPRRPSGSQHSPNLQTFTSDADGTVFFPERRPSPFLRRAELPGSCSPMLAQSRKASSDSQPSSPRYGYEPPLYEEPPVEYQAPIYDEPPMDMQFEVSGPYQAGSPQRSPGRKPRPFLPTTKQAPASPCQQLVRTKQRCPERFLSLEYSPAGKEYVRQLVYVEQAGSSPKLRSGPRHKYAPNPGGGSYSLQPSPCLLRDQRLGILSGDYSTMEGPEPRHSQLPTPLPQAQEDAMSWSSQQDTMSSTGYSPGTRKRKSRKPSLCQAPSTSADGPGDLMSEQPLAEEHSPCGPSLAQVKRAEAEADAARGAAEPFLAQARLAWEAQQVHFHMKQRGSWDSQQDGSGYESDGAVPLPMPGPVVRAFSEDEALAQQESKHWKRGTFEKLGFPQVLLEKSVSVQTNLASPEPYLHPSQSEDLGACAQFESSRQNRNAVPSSSCVFPTFTLRKPSSETDIENWASKHFNKHTQGLFRRKVSIANMLAWSSESIKKPMIVTSDRHVKKEACEIFKLIQMYMGDRRAKADPLHVALEIATKGWSMQGLRDELYIQLCRQTTENFRLESLARGWELMAICLAFFPPTPKFHSYLEGYIYRHMDPVNDTKVTQHIKELLERNTKKKSKLRKKPKPYVEELDGVAISTYAKYCYHKLQKAALTGAKKGLKKPNVEEIRHAKNAVFSPSMFGSSLQEIMSMQKERYPDRQLPWVQTRLSEEVLALNGDQTEGIFRVPGDIDEVNALKLQVDQWKVPTGLEDPHVPASLLKLWYRELEEPLIPHEFYEQCIAHYESPEAAVAVVHALPRINRMVLCYLIRFLQVFVQPANVAITKMDVSNLAMVMAPNCLRCQSDDPRVIFENTRKEMSFLRVLIQNLDTSFMEGVL