Sequence details NCBI ID: XM_004837644.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Erc1
Gene Name ELKS/RAB6-interacting/CAST family member 1, transcript variant X1
Entrez Gene ID 101698544

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ERC1 ENSCPOG00000008720 (Guinea pig)

Gene Details

ELKS/RAB6-interacting/CAST family member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007828, Guinea pig)

Protein Percentage 99.01%
CDS Percentage 95.22%
Ka/Ks Ratio 0.02709 (Ka = 0.0053, Ks = 0.1956)

ERC1 ENSG00000082805 (Human)

Gene Details

ELKS/RAB6-interacting/CAST family member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000380386, Human)

Protein Percentage 98.03%
CDS Percentage 92.53%
Ka/Ks Ratio 0.03223 (Ka = 0.0099, Ks = 0.307)

Erc1 ENSRNOG00000009264 (Rat)

Gene Details

ELKS/RAB6-interacting/CAST family member 1 (Erc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012397, Rat)

Protein Percentage 97.15%
CDS Percentage 88.85%
Ka/Ks Ratio 0.02238 (Ka = 0.0136, Ks = 0.6086)

Genome Location

Sequence Coding sequence

Length: 3363 bp    Location: 11907412..11397366   Strand: -
Raw sequence   
>XM_004837644.1
ATGTATGGGAGTGCTCGCTCAGTTGGGAAGGTAGAACCAAGCAACCAGAGCCCTGGCCGTTCACCCAGGCTTCCACGCTCCCCTCGCTTAGGTCATCGTCGGACCAATAGTACAGGAGGGAGTTCTGGAAGCAGTGTTGGAGGTGGCAGTGGGAAAACCCTTTCAATGGAGAATATACAATCCTTAAATGCTGCCTATGCTACATCTGGCCCTATGTACCTAAGTGACCATGAAAATGTAGGTTCAGAAACACCTAAAAGCACCATGACACTTGGCCGTTCTGGGGGACATCTGCCTTATGGTGTTAGGATGACCGCTATGGGCAGTAGCCCCAATATAGCCAGTAGTGGCATTGCTAGTGACACCATAGCATTTGGAGAACATCACCTCCCTCCTGTGAGTTTGGCATCCACTGTACCTCACTCTCTTCGTCAGGCAAGAGATAATACCATCATGGATTTGCAGACACAGCTGAAGGAGGTGTTAAGGGAAAATGATCTCTTGAGAAAGGATGTAGAAGTAAAGGAGAGCAAATTGAGTTCTTCAATGAATAGCATCAAGACCTTTTGGAGCCCAGAACTGAAGAAAGAGCGAGCCCTGAGAAAAGATGAAGCTTCTAAAATCACCATTTGGAAGGAACAGTATAGAGTTGTGCAGGAAGAAAACCAGCACATGCAGATGACGATCCAGGCTCTTCAGGATGAATTGCGGATCCAGAGGGACCTGAATCAGCTGTTTCAGCAAGATAGTAGCAGTAGGACTGGTGAACCTTGTGTGGCAGAGTTGACAGAGGAGAACTTCCAGAGGCTGCATGCTGAGCATGAGCGGCAGGCCAAAGAGCTGTTCCTTCTGCGGAAGACTCTGGAGGAAATGGAGCTACGTATTGAGACTCAGAAACAAACCCTAAATGCTCGGGATGAGTCCATTAAGAAGCTTCTGGAAATGTTGCAAAGCAAAGGACTTTCTGCCAAAGCTACTGAGGAAGACCATGAGAGAACAAGACGGCTGGCAGAGGCAGAGATGCATGTCCATCACCTAGAAAGCCTTTTGGAGCAGAAGGAAAAAGAGAACAATATGTTAAGAGAGGAGATGCACCGCAGGTTTGAGAATGCCCCTGATTCTGCCAAAACAAAGGCTCTGCAAACTGTTATTGAGATGAAGGATTCAAAAATTTCCTCTATGGAGCGTGGGCTCCGAGACCTGGAAGAGGAAATTCAGATGCTGAAATCAAATGGGGCTTTGAGTACAGAAGAACGGGAGGAAGAAATGAAGCAAATGGAGGTGTATCGGAGCCATTCTAAATTTATGAAAAATAAGGTAGAGCAACTGAAGGAGGAACTAAGTTCGAAAGAGGCTCAAGGGGAGGAGCTGAAAAAGAGAGCAGCTGGTCTTCAGGCTGAGATTGGCCAAGTGAAACAGGAGCTGTCCAGAAAGGACACAGAGCTACTGGCCTTGCAGACAAAGCTGGAAACACTCACAAACCAGTTCTCAGACAGTAAGCAACATATTGAAGTGCTGAAGGAGTCCTTGACTGCTAAGGAACAGAGGGCTGCCATCCTACAGACTGAGGTGGATGCTCTCCGATTGCGTTTAGAAGAGAAGGAAACCATGCTGAATAAAAAGACAAAACAAATCCAGGAGATGGCTGAGGAGAAGGGGACACAAGCTGGAGAGATACATGATCTGAAAGACATGCTGGATGTGAAGGAGCGGAAAGTTAATGTTCTTCAGAAGAAGATTGAAAATCTTCAAGAGCAGCTTAGAGATAAGGAAAAGCAGATGAGCAGCTTAAAAGAACGAGTCAAATCCCTGCAGGCCGACACTACCAACACTGATACTGCCCTGACGACTCTGGAGGAGGCCCTTGCTGAGAAAGAGCGGACAATTGAACGCTTAAAGGAACAGAGGGACAGAGATGAACGGGAGAAGCAAGAAGAAATTGATAACTATAAAAAAGATCTTAAAGACCTGAAGGAAAAAGTCAGCCTCTTGCAAGGCGATCTCTCAGAGAAAGAGGCTTCACTCTTGGATCTGAAAGAGCACGCTTCTTCCCTGGCTTCGTCAGGACTGAAAAAGGACTCAAGGCTTAAGACACTAGAGATTGCTCTGGAACAGAAGAAAGAGGAATGTCTGAAAATGGAAGCACAGTTGAAAAAGGCACATGAGGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGAGCGAATACAGCGATTGGAGAGAGAGATTTCTAGGTACAAAGATGAATCCAGCAAGGCCCAGACAGAGGTTGATCGTCTCTTGGAAATCTTGAAGGAGGTAGAAAATGAGAAGAATGATAAAGATAAGAAGATAGCTGAGTTGGAAAGTCTCACCTCAAGGCAGGTGAAAGACCAGAATAAGAAAGTAGCAAATCTGAAGCACAAGGAACAAGTGGAAAAGAAGAAGAGTGCACAGATGCTAGAGGAAGCCCGACGAAGGGAAGACAACCTCAATGACAGCTCCCAGCAACTGCAGGACAGTCTCCGTAAGAAGGATGACAGGATTGAAGAATTGGAGGAAGCACTGAGAGAAAGTGTACAGATAACTGCAGAGCGAGAAATGGTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGTGGAAGAGCTATTGATTGCCATGGAAAAAGTCAGACAGGAACTAGAGTCCATGAAAGCAAAGCTGTCCTCCACCCAGCAGTCTCTGGCAGAAAAGGAAACTCATTTGACCAATCTTCGGGCAGAGAGAAGGAAACACTTGGAGGAAGTTCTGGAGATGAAGCAAGAAGCTCTCCTGGCTGCTATTAGTGAAAAAGATGCCAATATAGCTCTTTTGGAGCTTTCATCCTCTAAGAAAAAGACCCAAGAGGAAGTGGCTGCACTAAAGCGTGAGAAAGATCGCCTCGTGCAACAGCTTAAACAGCAGACACAAAATCGAATGAAGCTGATGGCCGACAACTATGAGGATGACCACTTCAAGTCCTCCCATTCCAATCAGACAAATCATAAACCCTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACTTGATCAAAATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCCTCATCCTTCATGGACTCACTCCACCAGCTTCCTACAACTTGGATGATGACCAGGCAGCTTGGGAGAATGAGCTGCAGAAGATGACCCAGGAGCAGCTTCAGAGTGAGTTAGAAAAGTGTGAGCGGGATAATGCAGAACTGCAGGAGTTTGCCAATGCCATTCTTCAACAGATAGCAGACCACTGCCCTGACATCCTGGAGCAGGTGGTCAATGCGCTGGAAGAGTCATCCTGA

Related Sequences

XP_004837701.1 Protein

Erc1 PREDICTED: ELKS/Rab6-interacting/CAST family member 1 isoform X1 [Heterocephalus glaber]

Length: 1120 aa      
>XP_004837701.1
MYGSARSVGKVEPSNQSPGRSPRLPRSPRLGHRRTNSTGGSSGSSVGGGSGKTLSMENIQSLNAAYATSGPMYLSDHENVGSETPKSTMTLGRSGGHLPYGVRMTAMGSSPNIASSGIASDTIAFGEHHLPPVSLASTVPHSLRQARDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLSSSMNSIKTFWSPELKKERALRKDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRTGEPCVAELTEENFQRLHAEHERQAKELFLLRKTLEEMELRIETQKQTLNARDESIKKLLEMLQSKGLSAKATEEDHERTRRLAEAEMHVHHLESLLEQKEKENNMLREEMHRRFENAPDSAKTKALQTVIEMKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSSKEAQGEELKKRAAGLQAEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQEMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQGDLSEKEASLLDLKEHASSLASSGLKKDSRLKTLEIALEQKKEECLKMEAQLKKAHEATLEARASPEMSERIQRLEREISRYKDESSKAQTEVDRLLEILKEVENEKNDKDKKIAELESLTSRQVKDQNKKVANLKHKEQVEKKKSAQMLEEARRREDNLNDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQVEELLIAMEKVRQELESMKAKLSSTQQSLAEKETHLTNLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKDRLVQQLKQQTQNRMKLMADNYEDDHFKSSHSNQTNHKPSPDQIIQPLLELDQNRSKLKLYIGHLTALCHDRDPLILHGLTPPASYNLDDDQAAWENELQKMTQEQLQSELEKCERDNAELQEFANAILQQIADHCPDILEQVVNALEESS