Sequence details NCBI ID: XM_004837621.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Cacna1c
Gene Name calcium channel, voltage-dependent, L type, alpha 1C subunit, transcript variant X9
Entrez Gene ID 101717129

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6522 bp    Location: 10927341..10201099   Strand: -
Raw sequence   
>XM_004837621.1
ATGCTTCGAGCCTTTGTTCAGCCCACCACGCCTGCATACCAGCCGCTGTCCAGTCACCTGTCTGCCGACACAGAGGTAAAGTGCAAGGGCACCTTGGTGCATGAAGCTCAGCTCAGCTGTTTCTACATCTCTCCTGGAGGTTCCAACTATGGGAGTCCACGCCCAGCTCATGCCAACATGAATGCCAATGCAGCTGCGGGGCTGGCCCCTGAGCACATCCCCACCCCGGGGGCAGCCCTATCCTGGCAAGCAGCCATCGATGCGGCCCGGCAGGCCAAGCTGATGGGCAGTGCTGGGAATGCGACCATCTCCACTGTCAGCTCTACACAGCGGAAGCGGCAGCAGTATGGGAAACCCAAGAAGCAGGGTGGCACGACCGCCACGCGGCCGCCCCGGGCCCTGCTCTGCCTGACTCTGAAGAACCCTATCCGGAGAGCGTGCATAAGCATTGTCGAATGGAAATATCCTTTACCATTTGAAATAATTATTTTACTGACTATTTTTGCCAATTGTGTGGCCTTAGCAATCTATATTCCCTTTCCAGAAGATGATTCCAACGCCACCAATTCCAACCTGGAGCGAGTGGAATATCTCTTTCTCATAATTTTTACTGTGGAAGCATTTTTAAAAGTTATCGCCTATGGACTTCTCTTTCACCCCAATGCTTACCTCCGCAATGGTTGGAACTTACTAGATTTTATCATTGTGGTTGTAGGGCTTTTTAGTGCAATTTTAGAACAAGCAACCAAAGCAGATGGGGCAAATGCTCTAGGAGGGAAAGGCGCTGGATTTGATGTGAAAGCGCTGAGGGCCTTCCGCGTGCTGCGCCCCTTGCGGCTGGTGTCCGGAGTCCCGAGTCTCCAGGTGGTCCTGAACTCTATCATCAAGGCCATGGTGCCCCTGCTGCACATCGCCCTGCTTGTGCTGTTCGTCATCATCATCTATGCGATCATCGGCCTGGAGCTCTTCATGGGGAAGATGCATAAAACATGCTACAACCAGGAGGGCATTGCAGACGTTCCAGCAGAAGAGGACCCCTCCCCCTGTGCTCTTGAGAGTGGCCACGGGCGGCAGTGCCAGAATGGCACGGTGTGCAAGCCCGGGTGGGATGGGCCCAAGCACGGCATCACCAACTTCGACAACTTTGCCTTCGCCATGCTCACAGTGTTCCAGTGCATCACCATGGAGGGCTGGACCGACGTGCTATACTGGATGCAGGACGCTATGGGCTATGAGTTACCCTGGGTGTATTTTGTCAGTCTGGTCATCTTTGGATCCTTTTTCGTTCTAAATCTGGTTCTCGGTGTGTTGAGCGGAGAGTTTTCCAAAGAGAGAGAGAAGGCCAAGGCTCGGGGAGATTTCCAGAAGCTTCGAGAGAAACAACAGCTGGAGGAAGATCTCAAAGGCTACCTCGACTGGATCACTCAGGCAGAAGACATCGACCCAGAGAATGAAGACGAAGGCATGGATGAGGAGAAACCCCGAAACATGAGCATGCCCACGAGTGAGACCGAGTCCGTCAACACTGAAAACGTGGCCGGAGGTGACATCGAAGGAGAGAACTGTGGGGCGAGGCTGGCCCACCGGATCTCCAAATCAAAGTTCAGCCGCTACTGGCGCAGGTGGAATCGGTTCTGCAGAAGAAAGTGCCGTGCTGCAGTCAAGTCCAATGTCTTCTACTGGCTGGTGATCTTCCTGGTGTTCCTCAATACACTTACTATTGCCTCGGAACATTACAACCAGCCCCACTGGCTCACGGAAGTGCAAGACACAGCCAATAAGGCCCTGCTGGCCCTGTTTACTGCGGAGATGCTCCTGAAGATGTACAGCCTGGGCCTGCAGGCCTACTTCGTGTCCCTCTTCAACCGCTTCGACTGCTTCATCGTGTGTGGGGGCATCCTGGAGACCATCCTGGTGGAGACCAAGATCATGTCTCCCCTGGGCATCTCTGTGCTGAGATGTGTGCGGCTACTGAGGATATTTAAAATCACAAGGTACTGGAACTCCTTAAGCAACCTGGTAGCATCCTTGCTGAACTCTGTGCGCTCCATCGCCTCCCTGCTCCTACTCCTCTTCCTCTTTATCATCATCTTCTCCCTGCTGGGAATGCAGCTCTTTGGAGGAAAGTTCAACTTTGATGAGATGCAGACCCGGAGGAGCACATTCGATAACTTCCCCCAGTCCCTCCTCACTGTGTTTCAGATCCTGACCGGGGAGGACTGGAATTCGGTGATGTATGATGGGATCATGGCTTATGGCGGCCCCTCTTTTCCAGGGATGTTAGTCTGTATTTACTTCATCATCCTCTTCATCTGTGGAAATTATATCCTACTGAATGTGTTCTTGGCCATTGCTGTGGACAACCTGGCTGATGCTGAGAGCCTCACTTCTGCCCAAAAGGAGGAAGAAGAAGAGAAGGAGAGAAAGAAGCTGGCCAGGACTGCCAGCCCAGAGAAGAAACAGGAGGCAGTGGAGAAGCCAGCAGTGGAGGAGACCAAGGAGGAGAAAATTGAGCTGAAATCCATTACTGCTGATGGGGAGTCCCCACCCACCAAGATCAACGTGGATGACCTCCAGCACAATGAAAATGAGGACAAGAGTCCCTACCCCAACCCAGACGCTGCAGGAGAAGAGGATGAGGAGGAGCCTGAGATGCCTGTCGGGCCCCGTCCACGACCACTCTCTGAGCTACACCTTAAGGAAAAAGCCGTGCCCATGCCAGAAGCCAGCGCATTTTTCATCTTTAGCCCTAGCAACAGGTTTCGCCTCCAGTGCCACCGCATTGTCAATGACACGATCTTCACCAACCTGATCCTCTTCTTCATCCTGCTCAGCAGCATTTCTCTGGCTGCGGAGGACCCCGTACAGCACACCTCCTTCAGGAACCATATTCTGTTTTATTTTGATATTGTTTTTACTGCCATTTTCACCATTGAAATTGCTCTGAAGATGACTGCGTATGGGGCTTTCCTACACAAGGGCTCTTTCTGCCGGAACTACTTCAACATCTTGGACCTGCTGGTGGTCAGCGTGTCCCTCATCTCCTTTGGCATCCAGTCCAGTGCAATCAATGTGGTGAAGATCTTGCGAGTCCTTCGAGTCCTCCGGCCCCTGAGGGCCATCAACAGGGCTAAGGGGCTAAAGCACGTGGTCCAGTGTGTGTTTGTTGCCATCCGGACTATCGGGAATATCGTCATTGTCACCACACTGCTGCAGTTCATGTTTGCCTGCATCGGGGTCCAGCTGTTCAAGGGAAAGCTCTACACCTGCTCTGATAGTTCCAAACAGACCGAGGCAGAATGCAAGGGTAACTACATCACATACAAAGACGGGGAGGTTGACCAACCTATCATCCAGCCCCGCAGCTGGGAGAACAGCAAGTTTGACTTCGACAATGTCCTGGCAGCTATGATGGCCCTCTTCACCGTCTCCACCTTTGAGGGGTGGCCAGAGCTGCTGTACCGCTCCATCGACTCCCACACGGAAGACAAGGGTCCCATCTACAACTACCGTGTGGAGATCTCCATCTTCTTCATTATCTACATCATCATCATTGCCTTCTTCATGATGAACATCTTCGTGGGTTTCGTCATCGTCACCTTCCAGGAGCAGGGAGAACAAGAGTACAAGAACTGTGAGCTGGACAAGAACCAGCGGCAGTGTGTGGAGTATGCCCTCAAGGCCCGGCCCCTGCGCCGGTACATCCCCAAGAACCAGCACCAGTACAAGGTGTGGTATGTGGTCAACTCCACCTACTTTGAGTACCTGATGTTCGTCCTCATCCTGCTGAACACCATCTGCTTGGCCATGCAGCACTACGGCCAGAGCTGCCTGTTCAAAATCGCCATGAACATCCTCAACATGCTCTTCACTGGCCTCTTCACTGTGGAGATGATCCTGAAACTCATTGCCTTCAAACCCAAGGGTTACTTTAGTGATCCCTGGAATGTTTTTGACTTCCTCATCGTGATTGGGAGCATAATTGATGTCATTCTCAGTGAGACTAATCCAGCTGAACATACCCAATGCTCTCCCTCTATGAACGCAGAGGAAAACTCCCGCATCTCCATCACCTTCTTCCGCCTCTTCCGGGTCATGCGCCTGGTCAAGCTGCTGAGCCGCGGGGAGGGCATCCGGACACTGCTGTGGACCTTCATCAAGTCCTTTCAGGCCTTGCCCTATGTGGCCCTTCTAATAGTGATGCTGTTCTTCATCTACGCCGTGATTGGCATGCAGGTGTTTGGAAAGATTGCCTTGAATGACACCACCGAGATCAACCGGAACAACAACTTTCAGACCTTCCCCCAAGCCGTGCTGCTGCTGTTCAGGTGTGCCACAGGGGAGGCCTGGCAGGACATCATGCTGGCCTGCATGCCAGGCAAGAAATGCGCCCCAGAGTCCGAGCCCAGCAATAGCACGGAAGGAGAGACGCCCTGCGGCAGCAGCTTTGCTGTCTTCTATTTCATCAGCTTCTACATGCTCTGTGCCTTCCTGATCATCAACCTCTTTGTAGCCGTCATCATGGACAACTTTGACTACCTGACGAGAGACTGGTCAATCCTTGGTCCCCACCATCTAGATGAATTTAAAAGAATCTGGGCAGAATATGACCCCGAAGCCAAGGGTCGTATCAAACACCTGGATGTGGTGACCCTCCTCCGACGGATTCAGCCTCCTCTGGGCTTTGGGAAGCTGTGTCCTCACCGTGTGGCCTGCAAACGCCTCGTCTCCATGAACATGCCTCTGAACAGTGATGGGACAGTCATGTTCAATGCCACTCTGTTTGCCCTGGTCAGGACAGCCCTGAGGATCAAAACGGAAGGAAACCTAGAACAAGCCAACGAGGAGCTGCGTGCGATCATCAAGAAGATCTGGAAGCGGACCAGCATGAAGCTGCTGGACCAAGTGGTGCCCCCTGCTGGTGATGATGAGGTCACAGTTGGCAAGTTCTACGCTACTTTCCTGATCCAAGAGTACTTCCGGAAATTCAAGAAGCGAAAAGAGCAAGGGCTTGTGGGCAAGCCCTCCCAGAGGAACGCTCTGTCCCTGCAGGCTGGCTTGCGCACACTGCACGACATCGGGCCTGAAATCCGACGAGCCATCTCTGGAGATCTGACTGCCGAGGAAGAGCTAGACAAGGCCATGAAGGAAGCTGTGTCTGCTGCCTCTGAAGATGACATCTTCAGGAGGGCCGGTGGTCTGTTCGGCAACCACGTCAGCTACTACCAAAGCGACAGCCGGAGCACCTTCCCCCAGACCTTCACCACCCAGCGCCCACTGCACATCAACAAGGCGGGCAGCAACCAAGGCGACACTGAGTCGCCCTCCCATGAGAAGCTGGTGGACTCCACCTTCACCCCCAGCAGCTACTCGTCCACTGGCTCCAACGCCAACATCAACAACGCCAACAACACTGCCCTGGGCCGCTTCCCCCATCCCGCCGGCTACGCCAGCACAGTCAGCACTGTGGAGGGCCACGGGCCCCCCTCATCTCCTGCCGCCTGGGCACAGGAGACCACAAGGAAGCTCGGCACCATGAGGTGCCACTCCCGGGAGAGCCAGATAGCTGTGGTATGTCAGGAGGAGGCTTCTCAGGACAAGACCTATGACGTGGAGCTGAATGAAAATGCTGAATACCGCAGCGAGCCCACCCTGCTCTCCACAGAGATGCTCACCTACCAGGATGATGAAAATCGACAACTGACACCCCCCGAGGAAGACAAGAGGGACACCCGGCCCTCTCCAAAGAGGGGTTTCCTCCGCTCTGCCTCCCTAGGTCGAAGAGCCTCCTTCCACCTGGAGTGTTTAAAGCGACAGAAGAATCACGGGGGTGACATTTCTCAGAAGACAGTCTTGCCCTTGCACCTGGTTCATCATCAGGCGCTGGCCGTGGCCGGCCTGAGCCCCCTCCTCCAGAGAAGCCATTCCCCGACCACGTTCCCCAGGCCGAGCGCCACGCCCCCCGCCACGCCCGCGAGCCGAGCCTGGGCCCCGCAGCCCATCCCCACCCTGCGGCTAGAGGGCGCCGAGTCCAGCGAGAAACTCAACAGCAGCTTCCCGTCCATCCACTGCAGCTCCTGGTCAGAGGATGCCAGCCCCTGTGGCGGGGGCAGCAGCACAGCACGGAGAGCCCGGCCCGTCTCCCTCATGGTGCCCAGCCAGGCCGGGGCCCCGGGGAGACAGTTCCACGGCAGTGCCAGCAGCCTGGTAGAGGCGGTCTTGATTTCAGAAGGACTGGGTCAGTTTGCTCAAGATCCCAAGTTCATCGAGGTCGCAACCCAGGAGCTGGCTGACGCCTGCGATATGACCATAGAGGAGATGGAGAACGCAGCCGACAACATCCTCAGCGGGGGCGGCCCTCAGAGCCCCAACGGCACCCTCTTACCTTTTGTGAACTGCAGGGACCCAGGGCAGGACCGGGCGGGCGGCGGCGACGAGGACGAGGGCTGTGCGCGCGCCCTGGGGCGCGGCCGGAGCGAGGAGGAGCTCGCGGACAGCAGGGTCCACGTCCGCAGCCTGTAG

Related Sequences

XP_004837678.1 Protein

Cacna1c PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1C isoform X9 [Heterocephalus glaber]

Length: 2173 aa      
>XP_004837678.1
MLRAFVQPTTPAYQPLSSHLSADTEVKCKGTLVHEAQLSCFYISPGGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSWQAAIDAARQAKLMGSAGNATISTVSSTQRKRQQYGKPKKQGGTTATRPPRALLCLTLKNPIRRACISIVEWKYPLPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIADVPAEEDPSPCALESGHGRQCQNGTVCKPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETESVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEKKQEAVEKPAVEETKEEKIELKSITADGESPPTKINVDDLQHNENEDKSPYPNPDAAGEEDEEEPEMPVGPRPRPLSELHLKEKAVPMPEASAFFIFSPSNRFRLQCHRIVNDTIFTNLILFFILLSSISLAAEDPVQHTSFRNHILFYFDIVFTAIFTIEIALKMTAYGAFLHKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYTCSDSSKQTEAECKGNYITYKDGEVDQPIIQPRSWENSKFDFDNVLAAMMALFTVSTFEGWPELLYRSIDSHTEDKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCLFKIAMNILNMLFTGLFTVEMILKLIAFKPKGYFSDPWNVFDFLIVIGSIIDVILSETNPAEHTQCSPSMNAEENSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQDIMLACMPGKKCAPESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQAGLRTLHDIGPEIRRAISGDLTAEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDSRSTFPQTFTTQRPLHINKAGSNQGDTESPSHEKLVDSTFTPSSYSSTGSNANINNANNTALGRFPHPAGYASTVSTVEGHGPPSSPAAWAQETTRKLGTMRCHSRESQIAVVCQEEASQDKTYDVELNENAEYRSEPTLLSTEMLTYQDDENRQLTPPEEDKRDTRPSPKRGFLRSASLGRRASFHLECLKRQKNHGGDISQKTVLPLHLVHHQALAVAGLSPLLQRSHSPTTFPRPSATPPATPASRAWAPQPIPTLRLEGAESSEKLNSSFPSIHCSSWSEDASPCGGGSSTARRARPVSLMVPSQAGAPGRQFHGSASSLVEAVLISEGLGQFAQDPKFIEVATQELADACDMTIEEMENAADNILSGGGPQSPNGTLLPFVNCRDPGQDRAGGGDEDEGCARALGRGRSEEELADSRVHVRSL