Details from NCBI annotation

Gene Symbol Slc6a13
Gene Name solute carrier family 6 (neurotransmitter transporter, GABA), member 13, transcript variant X5
Entrez Gene ID 101697408

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC6A13 ENSCPOG00000013744 (Guinea pig)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012381, Guinea pig)

Protein Percentage 92.51%
CDS Percentage 94.01%
Ka/Ks Ratio 0.21389 (Ka = 0.0358, Ks = 0.1674)

SLC6A13 ENSG00000010379 (Human)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000339260, Human)

Protein Percentage 89.7%
CDS Percentage 89.31%
Ka/Ks Ratio 0.12809 (Ka = 0.0532, Ks = 0.4154)

Slc6a13 ENSMUSG00000030108 (Mouse)

Gene Details

solute carrier family 6 (neurotransmitter transporter, GABA), member 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066779, Mouse)

Protein Percentage 88.54%
CDS Percentage 87.54%
Ka/Ks Ratio 0.10812 (Ka = 0.0579, Ks = 0.5358)

Slc6a13 ENSRNOG00000012876 (Rat)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 13 (Slc6a13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018083, Rat)

Protein Percentage 88.7%
CDS Percentage 87.04%
Ka/Ks Ratio 0.10021 (Ka = 0.0582, Ks = 0.5808)

Genome Location

Sequence Coding sequence

Length: 1809 bp    Location: 8531133..8473898   Strand: -
>XM_004837557.1
ATGGATAGCAGGGTCTCAGGCACAACCAGTAATGGAGAAACAAAACCAGTGTATCCAGTCATGGAAAAGGCAGAGGAAGATGGCACTCTGGAGCGGGGGCACTGGAAGAACAAGACGGAATTTGTGCTGTCAGTAGCCGGGGAGATCGTTGGCTTAGGCAACGTCTGGAGGTTTCCCTATCTCTGCTACAAGAATGGGGGAGGCGCCTTTTTCATCCCCTACCTCATCTTTCTCTTTACCTGTGGCATTCCTCTCTTCTTCCTGGAGACAGCACTGGGCCAGTACACGAGCCAGGGGGGCATCACAGCCTGGAGGAAGATCTGCCCCATCTTTGAGGGCATTGGCTATGCCTCCCAGGTGATTGTCATGCTCCTCAACATCTACTACATCATCGTCCTGGCCTGGGCCTTCTTCTACCTCTTCAGCAGCTTCACTGCTGACCTGCCCTGGGGAAGCTGCCAACACGAATGGAACACAGAGAACTGTGTGGAGTTTCAGAAGACCAATGGCTCCATGAATGTGACCTCTGAGAATGTCACCTCCCCTGTCATTGAGTTCTGGGAGAGGCGTGTCCTAAAGATCTCTGATGGCATCGAGCACCTGGGGGCCCTGCGCTGGGAGCTGGCCCTGTGCCTCCTGCTGGCCTGGATCATCTGCTACTTCTGCATCTGGAAGGGGGTCAAATCCACGGGCAAGGTGGTGTACTTCACAGCCACATTCCCTTATCTCATGCTGGTGGTCCTGTTAATCCGAGGGGTGACACTGCCTGGGGCAGCCAAAGGAATTCAGTTCTACCTGTACCCTGACCTCACACGTCTGTGGGATCCCCAGGTGTGGATGGACGCAGGCACCCAGATCTTCTTCTCCTTTGCCATCTGCCTGGGCTGCCTCACGGCCCTGGGCAGCTACAACAAGTACCACAACAACTGCTACAGGGACTGCATCGCCCTCTGCTTCCTCAACAGCGGTACCAGCTTCATAGCCGGCTTTGCCATCTTCTCCATCCTGGGCTTCATGTCCCAGGAGCAGGGTGTGCCCATTTCTGAGGTTGCCGAGTCAGGCCCTGGCCTGGCTTTCATCGCCTACCCTCGGGCTGTTGCAATGCTGCCCTTCTCTCCTCTGTGGGCCTGCTGCTTCTTCTTCATGGTCATTCTCCTGGGACTCGATAGCCAGTTTGTGTGCGTAGAGAGCCTGGTCACAGCGCTGGTGGACATGCACCCCCAGAGGTTCCGCAGGAAGAACCGGAGAGAGATCCTCATCCTGGTGGTGGCCATCATTTCCTTCCTTTTTGGGCTGGTCATGCTCACAGAGGGTGGCATGTATGTGTTCCAGCTCTTTGACTACTATGCAGCCAGTGGCATGTGCCTCCTGTTTGTGGCCATCTTTGAGTCCTTCTGTGCGGCTTGGGTTTATGGAGCTGGACGCTTCTATGACAATGTTGAAGATATGATTGGGTACAGGCCATGGCCTCTTATCAAATACTGCTGGCTCTTTTTCACACCAGCTGTGTGCATGGCCACCTTCTTGTTCTCCTTGATCAAGTATGCCCCGCTGACCTACAACAAGAAGTACATGTACCCATGGTGGGGTGATGCCCTGGGCTGGCTCCTGGCTCTGTCCTCCATGGTCTGCATTCCTACCTGGAGCATCTACAAATTCATCAGCCTCAAGGGCTCCCTCAGAGAGAGAGTTCGCCAGCTCTTGTGCCCAGCTGAGGACCTGCCCCAGAGGAGCCAAGCAGGACCCCCCACCCCTGCCACACCCAGGACGTCTCTTCTTCGACTCACAGAACTGGAATCAAACATCTAG

Related Sequences

XP_004837614.1 Protein

Slc6a13 PREDICTED: sodium- and chloride-dependent GABA transporter 2 isoform X5 [Heterocephalus glaber]

Length: 602 aa      View alignments
>XP_004837614.1
MDSRVSGTTSNGETKPVYPVMEKAEEDGTLERGHWKNKTEFVLSVAGEIVGLGNVWRFPYLCYKNGGGAFFIPYLIFLFTCGIPLFFLETALGQYTSQGGITAWRKICPIFEGIGYASQVIVMLLNIYYIIVLAWAFFYLFSSFTADLPWGSCQHEWNTENCVEFQKTNGSMNVTSENVTSPVIEFWERRVLKISDGIEHLGALRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLVVLLIRGVTLPGAAKGIQFYLYPDLTRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCYRDCIALCFLNSGTSFIAGFAIFSILGFMSQEQGVPISEVAESGPGLAFIAYPRAVAMLPFSPLWACCFFFMVILLGLDSQFVCVESLVTALVDMHPQRFRRKNRREILILVVAIISFLFGLVMLTEGGMYVFQLFDYYAASGMCLLFVAIFESFCAAWVYGAGRFYDNVEDMIGYRPWPLIKYCWLFFTPAVCMATFLFSLIKYAPLTYNKKYMYPWWGDALGWLLALSSMVCIPTWSIYKFISLKGSLRERVRQLLCPAEDLPQRSQAGPPTPATPRTSLLRLTELESNI