Details from NCBI annotation

Gene Symbol Slc6a12
Gene Name solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12, transcript variant X1
Entrez Gene ID 101725721

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC6A12 ENSCPOG00000013741 (Guinea pig)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012378, Guinea pig)

Protein Percentage 95.2%
CDS Percentage 93.23%
Ka/Ks Ratio 0.07293 (Ka = 0.0219, Ks = 0.2996)

SLC6A12 ENSG00000111181 (Human)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000388184, Human)

Protein Percentage 86.81%
CDS Percentage 85.99%
Ka/Ks Ratio 0.10698 (Ka = 0.0705, Ks = 0.6592)

Slc6a12 ENSMUSG00000030109 (Mouse)

Gene Details

solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032200, Mouse)

Protein Percentage 86.4%
CDS Percentage 84.32%
Ka/Ks Ratio 0.09041 (Ka = 0.0736, Ks = 0.8144)

Slc6a12 ENSRNOG00000013547 (Rat)

Gene Details

solute carrier family 6 (neurotransmitter transporter), member 12 (Slc6a12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018821, Rat)

Protein Percentage 85.28%
CDS Percentage 83.57%
Ka/Ks Ratio 0.09013 (Ka = 0.0796, Ks = 0.8834)

Genome Location

Sequence Coding sequence

Length: 1998 bp    Location: 8467749..8441193   Strand: -
>XM_004837548.1
ATGCACATAGGGGTCATTCTCTCAGGAAGATTTAAGGCTGAGAGAGGAGGTGTGATTTGCCAAGATCACACAGCAGGCCTCAGGCCACCACGTACTGTCTTGGCTTTGCCTCTCAAGCCCTCCTGTCCTACCCTGTGCGGTCTCACTGTCCGAGGCAGGGCTATGGACAGGAAAGTGGCAATCCACAAGGATGAGGTCTCCTGGATCCCTGAGGAAGGAGAAACGTTGGACCGGGAAGGCAAGGACCAGGTGAAGGATCGGGGCCAATGGACCAACAAGATGGAGTTTGTGCTGTCAGTGGCCGGGGAGATCATTGGGCTGGGCAATGTCTGGAGGTTTCCCTATCTCTGCTACAAAAATGGAGGTGGAGCCTTCTTTGTACCCTACTTCATCTTCTTCCTCAGCTGCGGCATCCCAGTGTTCTTCTTGGAGGTGGCGCTGGGCCAGTACACCAGCCAGGGAAGTGTCACAGCCTGGAGGAAGATCTGCCCCCTCTTCCAGGGTATTGGCATAGCATCCGTGGTCATTGAGTCCTATTTGAATATCTACTACATCATCATCCTGGCCTGGGCACTCTTCTACTTGTTCAGCTCCTTCACCTCCGAGCTGCCCTGGACAACATGTACCAATCCCTGGAACACAGAGCATTGTGTGGACTTTTTGAACCACTCGGGAGCCAGCACAGTGACCTACTCTGAGAACCTCACCTCTGCTGTCATGGAATTCTGGGAGAGACGGGTTCTGGGAATCACCTCGGGCATCCATGACCTGGGGGCCCTGCGCTGGGAGCTGGCCCTGTGCCTCCTGCTGGCCTGGATCATCTGCTACTTCTGCATCTGGAAGGGGATCAAGTCCACGGGCAAGGTTGTTTATTTCACGGCCACGTTTCCCTACCTCATGCTGATTGTCCTGCTGATCCGAGGTGTCACTCTCCCCGGAGCCTACGAGGGTATCATCTACTACCTGAAGCCAGACCTGCTCCGTCTCAGGGACCCCCAGGTGTGGATGGACGCAGGCACCCAGATCTTCTTCTCCTTTGCCATCTGCCAGGGCTGCCTCACGGCCCTGGGCAGCTACAACAAGTACCACAACAACTGCTACAGGGACTCCATCGCCCTCTGCTTCCTGAACAGTGTCACCAGCTTTGTGGCTGGCTTTGTGGTCTTCTCCATCTTGGGCTTCATGTCCCAGGAGCAGGGAGTGCCCATTTCTGAAGTGGCCGAGTCAGGTCCTGGTCTGGCCTTCATCGCATTCCCTAAGGCTGTGACCATGATGCCTTTATCCCAGCTGTGGTCCTGCCTTTTTTTCATCATGCTGTTATTCCTAGGCCTGGACAGCCAGTTTGTCTGCATGGAGTGCCTGGTGACAGCCTCTGTGGACATGTTCCCCCAGCAGCTCCGGAAGCGTGGGCGGCGAGAGCTGCTGATCCTTGGCATCTCAATCATGTGCTACTTGGTAGGGCTCTTGCTGGTCACCGAGGGTGGGATGTACCTCTTCCAGCTCTTTGACTACTATGCCTGCAGCGGCATCTGCCTGCTCTTTCTCTCCGTATTTGAAGTCATCTGCATCAGCTGGGTGTACGGGGCAGACCGGTTCTATGACAACATTGAGGACATGATTGGCTACCGGCCTTGGCCACTGGTGAAGATTTCCTGGTTCTTCCTGACCCCAGCACTTTGCTTGGCCACCTTCCTCTTCTCCCTGAGCAAGCACACGCCGCTCACATACAACAATGTTTATGTCTACCCTCCCTGGGGCTACTCCATTGGCTGGTTCTTGGCCTTCTCCTCTATGGCCTGTGTTCCCCTCTTCATGGTTATCACCCTCCTGAAGACCCAGGGTTCCTTCAAGAAGCGCCTGTGCCAGCTCATCATCCCCGATCCCAGCCTGCCACAGCCCAGGCAACACCTACACCTGGACAATGGGCCTGGCCAGGACTGTGGGCCGTTCCCACTGAAGGAAGGATTCACTGCTGGGGAGAAGGAGACCGAACTATAG

Related Sequences

XP_004837605.1 Protein

Slc6a12 PREDICTED: sodium- and chloride-dependent betaine transporter isoform X1 [Heterocephalus glaber]

Length: 665 aa      View alignments
>XP_004837605.1
MHIGVILSGRFKAERGGVICQDHTAGLRPPRTVLALPLKPSCPTLCGLTVRGRAMDRKVAIHKDEVSWIPEEGETLDREGKDQVKDRGQWTNKMEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFVPYFIFFLSCGIPVFFLEVALGQYTSQGSVTAWRKICPLFQGIGIASVVIESYLNIYYIIILAWALFYLFSSFTSELPWTTCTNPWNTEHCVDFLNHSGASTVTYSENLTSAVMEFWERRVLGITSGIHDLGALRWELALCLLLAWIICYFCIWKGIKSTGKVVYFTATFPYLMLIVLLIRGVTLPGAYEGIIYYLKPDLLRLRDPQVWMDAGTQIFFSFAICQGCLTALGSYNKYHNNCYRDSIALCFLNSVTSFVAGFVVFSILGFMSQEQGVPISEVAESGPGLAFIAFPKAVTMMPLSQLWSCLFFIMLLFLGLDSQFVCMECLVTASVDMFPQQLRKRGRRELLILGISIMCYLVGLLLVTEGGMYLFQLFDYYACSGICLLFLSVFEVICISWVYGADRFYDNIEDMIGYRPWPLVKISWFFLTPALCLATFLFSLSKHTPLTYNNVYVYPPWGYSIGWFLAFSSMACVPLFMVITLLKTQGSFKKRLCQLIIPDPSLPQPRQHLHLDNGPGQDCGPFPLKEGFTAGEKETEL