Details from NCBI annotation

Gene Symbol Efcab1
Gene Name EF-hand calcium binding domain 1, transcript variant X5
Entrez Gene ID 101717799

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EFCAB1 ENSCPOG00000003325 (Guinea pig)

Gene Details

EF-hand calcium binding domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003005, Guinea pig)

Protein Percentage 89.15%
CDS Percentage 88.68%
Ka/Ks Ratio 0.15001 (Ka = 0.0619, Ks = 0.4129)

EFCAB1 ENSG00000034239 (Human)

Gene Details

EF-hand calcium binding domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262103, Human)

Protein Percentage 89.1%
CDS Percentage 89.1%
Ka/Ks Ratio 0.15416 (Ka = 0.0589, Ks = 0.3819)

Efcab1 ENSMUSG00000068617 (Mouse)

Gene Details

EF hand calcium binding domain 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000087744, Mouse)

Protein Percentage 87.74%
CDS Percentage 88.52%
Ka/Ks Ratio 0.17092 (Ka = 0.0643, Ks = 0.3764)

Efcab1 ENSRNOG00000050091 (Rat)

Gene Details

EF hand calcium binding domain 1 (Efcab1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067253, Rat)

Protein Percentage 85.85%
CDS Percentage 87.42%
Ka/Ks Ratio 0.17251 (Ka = 0.0723, Ks = 0.419)

Genome Location

Sequence Coding sequence

Length: 780 bp    Location: 6780872..6791169   Strand: +
>XM_004837533.1
ATGGTCACACTGCGTGTTAAAGCCACGCAAACTCTAGGCAACAGAGACGGCCGCGCTGCTTCAGCTCCCGGGCTCATAAGGGCTCCAGCAACCGGAGACACCAGCCGCGCCAGGATTCCACGAGCACCTGGCATGAATCGAAAGAAGCTGCAGAAACTGACGGAAACCTTAACTAAAAATTGCAAGCACTTTAATAAATTTGAAGTGAGCTGTCTTATAAAGCTTTTCTATAATTTGGTGGGAGAAGCAGCCAAGCGGCCAGGGGTGGCCATTGGACTAGATCGCAATGCATTTCGGAACATTCTTCATGTGACATTTGGAATGACAGATGACATGATTATGGACAGAGTATTCCGAGGTTTTGATAAAGACAATGATGGCAATATAAATGTTACAGAATGGGTTAATGGATTATCACTGTTTCTTCGAGGATCTTTAGAAGAAAAAATGAAATATTGCTTTGAAGTGTTTGATTTGAACGGTGATGGCTTCATTTCAAAGGAGGAAATGTTTCACCTGCTGAAAAACAGCCTTCTCAAACAACCATCTGAGGAAGACCCTGATGAAGGAATTAAAGATCTGGTTGAAATAACACTTAAGAAAATGGACTATGACCACGATGGGAAGCTCTCTTCCGCAGACTATGAGAAGGCTGTGGGAGAAGAGACTCTTCTTCTGGAAGCCTTTGGACCCTGTCTGCCTGATCCAAAGAGCCAGATGGAATTTGAAGCCCAAGTATTCAAAGACCCAAATGATTTCCATGATAATATGAATTCCTAA

Related Sequences

XP_004837590.1 Protein

Efcab1 PREDICTED: EF-hand calcium-binding domain-containing protein 1 isoform X5 [Heterocephalus glaber]

Length: 259 aa      View alignments
>XP_004837590.1
MVTLRVKATQTLGNRDGRAASAPGLIRAPATGDTSRARIPRAPGMNRKKLQKLTETLTKNCKHFNKFEVSCLIKLFYNLVGEAAKRPGVAIGLDRNAFRNILHVTFGMTDDMIMDRVFRGFDKDNDGNINVTEWVNGLSLFLRGSLEEKMKYCFEVFDLNGDGFISKEEMFHLLKNSLLKQPSEEDPDEGIKDLVEITLKKMDYDHDGKLSSADYEKAVGEETLLLEAFGPCLPDPKSQMEFEAQVFKDPNDFHDNMNS