Details from NCBI annotation

Gene Symbol Pcmtd1
Gene Name protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X1
Entrez Gene ID 101715288

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCMTD1 ENSCPOG00000006593 (Guinea pig)

Gene Details

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005938, Guinea pig)

Protein Percentage 99.44%
CDS Percentage 97.29%
Ka/Ks Ratio 0.02189 (Ka = 0.0025, Ks = 0.114)

PCMTD1 ENSG00000168300 (Human)

Gene Details

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000353739, Human)

Protein Percentage 99.16%
CDS Percentage 95.89%
Ka/Ks Ratio 0.02098 (Ka = 0.0038, Ks = 0.1796)

Pcmtd1 ENSMUSG00000051285 (Mouse)

Gene Details

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000059261, Mouse)

Protein Percentage 98.04%
CDS Percentage 91.6%
Ka/Ks Ratio 0.01895 (Ka = 0.0086, Ks = 0.4544)

Pcmtd1 ENSRNOG00000005730 (Rat)

Gene Details

protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 (Pcmtd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007769, Rat)

Protein Percentage 98.6%
CDS Percentage 91.5%
Ka/Ks Ratio 0.0135 (Ka = 0.0062, Ks = 0.4598)

Genome Location

Sequence Coding sequence

Length: 1074 bp    Location: 3631874..3679437   Strand: +
>XM_004837522.1
ATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATCGATAATCTTAAAGAAGCTCAGTATATCCGCACTGAAAGAGTGGAGCAAGCTTTCAGAGCAATTGATCGTGGAGATTACTATTTGGAAGGCTACAGAGACAATGCTTACAAAGACTTAGCCTGGAAGCATGGAAACATACACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAAGCACTGAAACTTCAACCAGGATTATCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTTAGGTCCTTTTGGAATAAATCATGGAATTGAACTTCATTCAGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGTTTCATCAAAAATAGTGATAGCTTTGATAAATTTGAGTTCTGTGAACCTGCATTTGTGGTCGGTAATTGCCTCCAAATAGCATCTGACAGTCATCAGTATGATCGAATTTATTGTGGAGCTGGGGTCCAGAAAGACCATGAAAACTACATGAAAATATTGCTGAAAGTTGGAGGCATACTAGTTATGCCTATAGAAGATCAGTTAACACAGATTATGCGCACTGGACAAAACACTTGGGAAAGTAAAAATATCCTTGCTGTTTCATTTGCTCCACTTGTGCAACCAAGTAAGAATGATAATGGCAAGCCAGATTCTGTGGGACTCCCCCCCTGTGCTGTCAGGAATCTACAGGACTTGGCTCGTATTTACATTCGACGCACACTTAGAAATTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCTCAAAGAGCTCCACCCAAGAGGAAAAGAAAGAAAGTTAAGCAGAGGATTAACACTTATGTATTTGTGGGTAACCAGCTTATTCCTCAGCCTCTAGACAGTGAGGAGGATGAGAAAATGGAAGAAGATAACAAAGAAGAGGAAGAGAAAGATCACAGTGAAGCCATGAAGCCGGAGGAGCCACCTCAAAATTTCCTGAGAGAAAAAATCATGAAGCTGCCCCTCCCTGAATCTTTAAAAGCTTACTTGACATATTTTAGAGACAAATAA

Related Sequences

XP_004837579.1 Protein

Pcmtd1 PREDICTED: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 357 aa      View alignments
>XP_004837579.1
MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKKVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNFLREKIMKLPLPESLKAYLTYFRDK