Sequence details NCBI ID: XM_004837521.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol St18
Gene Name suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein), transcript variant X4
Entrez Gene ID 101714222

Database interlinks

Part of NW_004624735.1 (Scaffold)

For more information consult the page for NW_004624735.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ST18 ENSCPOG00000005486 (Guinea pig)

Gene Details

suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004940, Guinea pig)

Protein Percentage 91.24%
CDS Percentage 91.06%
Ka/Ks Ratio 0.18456 (Ka = 0.0466, Ks = 0.2524)

ST18 ENSG00000147488 (Human)

Gene Details

suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)

External Links

Gene Match (Ensembl Protein ID: ENSP00000276480, Human)

Protein Percentage 90.9%
CDS Percentage 90.74%
Ka/Ks Ratio 0.17793 (Ka = 0.0489, Ks = 0.2748)

St18 ENSMUSG00000033740 (Mouse)

Gene Details

suppression of tumorigenicity 18

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000118322, Mouse)

Protein Percentage 83.43%
CDS Percentage 84.41%
Ka/Ks Ratio 0.18264 (Ka = 0.0929, Ks = 0.5087)

St18 ENSRNOG00000006200 (Rat)

Gene Details

suppression of tumorigenicity 18 (St18), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056380, Rat)

Protein Percentage 84.6%
CDS Percentage 84.43%
Ka/Ks Ratio 0.17255 (Ka = 0.0897, Ks = 0.5198)

Genome Location

Sequence Coding sequence

Length: 3069 bp    Location: 3210927..3341507   Strand: +
Raw sequence   
>XM_004837521.1
ATGGATGCAGAGGCTGAAGATAATATGCTGCGTACTCGCTCTAAAGGAACAGAGGTGCCAATGGATTCTCTAATCCAGGAACTCAGTGCTGCATATGATTGCTCTACGGCAAAGAAGAGAAGGGCAGAGGAGCAGGCTTTGGGGGTCCCAGTCAACAAGAGGAAATCCCTGCTGATGAAGCCCCGACACTACAGCCCGAGCACAGACTGCAAAGGAGACCTCGACAAGACCGAGGAAGATAGTCTCTTGGATACCGACAACCACTCTGCTGCAGAAGAAATCATGATAAAACCTGTGGATGAGAGCCTTACTGCAAATGCACAAGAAAACTCCCATCAGAAAGAAGACCGATACACTTGCTATCAAGAGCTTGTGGTCAAATCTTTAATGCACTTGGGAAAATTTGAAAAGAATGTGTCTGTTCAGACCATAAATGAAAATTTAAATGACAGTGGCATCCAGTCTTTAAAAGCAGAGAGTGACGAAGCCGATGAGTGCTTTATGATCCATTCAGATGATGGAAGAGACAAAATGGATGATTCTCAGCCACTGTTCTGCTCCTCTGATGACAATGAAAGCAACTCTGAAAGTGCAGAGAATGGATGGGATAGTGGTTCCAACTTGTCAGAAGACAGCAAACCCCACCGAGGCCCAAAGTACATGTTAGTGGATAATAAAAAAGACCTATTGGAAGTTCCTGAAATAAAAACTGAAGATGACAGATTTGCTCCTTGTGAGAACAAGTGTGACTCTGACCCAGAAAGGAGAGACCTACAGAACGCGTGTGGGGAGCCCCTGGTTGGCCAAGCCCAGCCTTCCTGCCCTGAGACAGGGGAATGTGAGGGCAAGGGCCTGGCCATGATGGCAGAAGAATCCAGTGACCTGGAGAAAGCCAAGGGGAACCTAAGCTTGCTGGAGCACGCCATTGCTCTGCAGGCTGGGCGAGGTTGCGTTTTCCACACCTACAAAGAGCTGGACAGGTTTCTGCTGGAGCACCTGACAGGGGAAAGGAGACAAACCAAAGTTATTGACATGGCTGGAAGACAAATCCTTAACAATAAACATTCACCGAGGCCTGAAAAGAGAGAAACCAAGTGCCCCATCCCTGGGTGTGATGGCACCGGGCACGTGACGGGGCTCTACCCCCACCACCGCAGCCTTTCGGGGTGCCCTCACAAAGTGCGGGTTCCCCTGGAGATTCTTGCCATGCATGAAAATGTGCTCAAGTGTCCCACCCCAGGATGCACAGGACGGGGACATGTGAACAGCAACCGCAACACTCACAGGAGTCTTTCTGGTTGTCCAATCGCTGCAGCTGAAAAATTGGCAATGTCCCAGGATAAAAATCAGCCTGATTCTTCCCAAACTGGGCAGTGTCCTGACCAGGCCCACAGGACAAGCTTGGTGAAGCAAATTGAATTCAATTTCCGATCACAAGCCATCACCTCTCCCAGAGCCACAGTGTCAAAAGAACAAGAGAAGTTCGGAAAAGTTCCCTTTGATTATGCCAGTTTTGATGCCCAAGTTTTTGGTAAACGTCCCCTTGTACAAACAGGGCAAGGTCGAAAAACACCACCATTCCCTGAATCAAAGCCTTTTTCAAATCCAGTGAAATTTCCTAATCGACTGCCTAGTGCAGGCGCCCACACACAGAGCCCGAGCAGTGCCAGCTCTTATAGCTACGGTCAATGTAGTGAAGACACCCACATAGCAGCAGCTGCTGCCATCCTGAACCTTTCCACCCGCTGCAGGGAAGCCGCAGACACCCTCTCCAACAAACCACAGAGTCTGCATGCCAAGGGAGCCGAGATAGAAGTGGATGAAAATGGCACATTGGACTTAAGCATGAAAAAAAATCGAATCCTGGACAAGGCTGCACCTCTAACTTCCTCTAACACTACCATTCCAACACCTTCCTCTTCCCCCTTCAAAACGAGCAGCATTCTGGTCAATGCGGCATTCTATCAGGCTCTCTGTGACCAAGAGGGCTGGGAGACTCCTATCAACTATAGCAAAACTCATGGGAAGCCAGAGGAGGAGAAAGAGAAAGACACAGTAAACTCTTTAGAAAATTTAGAAGAAAAAAAGTTTCCTGGAGAAGCCTCTATACCAAGCCCTAAACTCAAGCTCCATGCAAGAGATCTCAAAAAAGAGCTAATCACCTGTCCAACACCAGGATGTGATGGAAGTGGCCACGTCACTGGAAACTATGCGTCTCACCGCAGGTGTCCAACCCCAGGTTGTGACGGCTCAGGGCATGTGACTGGAAACTATGCTTCCCACAGAAGCTTGTCTGGCTGCCCTCGTGCGAGGAAAGGTGGTGTCAAGATGACACCTACGAAGGAAGAAAAAGAAGACCCTGAACTTAAATGTCCAGTAATAGGGTGTGACGGCCAAGGTCACATATCAGGTAAATACACTTCACACCGCACAGCTTCTGGCTGTCCCCTGGCTGCCAAGAGACAGAAGGAGAATCCTCTCAATGGGACCCCTCTCTCCTGGAAACTGAACAAGCAAGAACTACCCCACTGCCCCTTGCCGGGCTGCAATGGACTGGGGCATGTAAATAATGTTTTTGTCACGCACAGAAGCTTATCTGGATGTCCTCTCAATGCACAAGCTATCAAAAAGGGCAAGGTCTCTGAGGAACTAATGACCATCAAGCTCAAGGCCACTGGGGGTGTGGAGGGTGATGAAGAAATTAGGCATTTGGATGAAGAAATAAAGGAACTGAATGAATCCAACCTTAAAATTGAAGCAGATATGATGAAACTTCAGACCCAGATCACGTCAATGGAGAGCAACTTAAAGACGATAGAGGAGGAGAACAAACTCATAGAACAGAACAATGAAAGTCTGCTGAAAGAGCTGGCAGGTCTGAGCCAGGCTCTCATCTCAAGCCTCGCGGACATCCAGCTTCCGCAAATGGGACCTATCAGTGAGCAGAATTTTGAAGCATATGTAAATACACTCACAGACATGTACAGCAATCTGGAACGGGACTATTCCCCGGAATGCAAAGCTCTACTGGAAAGTATCAAACAGGCAGTGAAGGGTATCCATGTGTAG

Related Sequences

XP_004837578.1 Protein

St18 PREDICTED: suppression of tumorigenicity 18 protein isoform X4 [Heterocephalus glaber]

Length: 1022 aa      View alignments
>XP_004837578.1
MDAEAEDNMLRTRSKGTEVPMDSLIQELSAAYDCSTAKKRRAEEQALGVPVNKRKSLLMKPRHYSPSTDCKGDLDKTEEDSLLDTDNHSAAEEIMIKPVDESLTANAQENSHQKEDRYTCYQELVVKSLMHLGKFEKNVSVQTINENLNDSGIQSLKAESDEADECFMIHSDDGRDKMDDSQPLFCSSDDNESNSESAENGWDSGSNLSEDSKPHRGPKYMLVDNKKDLLEVPEIKTEDDRFAPCENKCDSDPERRDLQNACGEPLVGQAQPSCPETGECEGKGLAMMAEESSDLEKAKGNLSLLEHAIALQAGRGCVFHTYKELDRFLLEHLTGERRQTKVIDMAGRQILNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQPDSSQTGQCPDQAHRTSLVKQIEFNFRSQAITSPRATVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKPFSNPVKFPNRLPSAGAHTQSPSSASSYSYGQCSEDTHIAAAAAILNLSTRCREAADTLSNKPQSLHAKGAEIEVDENGTLDLSMKKNRILDKAAPLTSSNTTIPTPSSSPFKTSSILVNAAFYQALCDQEGWETPINYSKTHGKPEEEKEKDTVNSLENLEEKKFPGEASIPSPKLKLHARDLKKELITCPTPGCDGSGHVTGNYASHRRCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGTPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGVEGDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV