Sequence details NCBI ID: XM_004837483.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmc1
Gene Name proteasome (prosome, macropain) 26S subunit, ATPase, 1
Entrez Gene ID 101698658

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMC1 ENSCPOG00000002424 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002207, Guinea pig)

Protein Percentage 96.99%
CDS Percentage 94.65%
Ka/Ks Ratio 0.12384 (Ka = 0.0196, Ks = 0.1583)

PSMC1 ENSG00000100764 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000261303, Human)

Protein Percentage 96.99%
CDS Percentage 93.31%
Ka/Ks Ratio 0.07367 (Ka = 0.0186, Ks = 0.2522)

Psmc1 ENSMUSG00000021178 (Mouse)

Gene Details

protease (prosome, macropain) 26S subunit, ATPase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021595, Mouse)

Protein Percentage 96.99%
CDS Percentage 88.85%
Ka/Ks Ratio 0.03817 (Ka = 0.0192, Ks = 0.5025)

Genome Location

Sequence Coding sequence

Length: 1008 bp    Location: 12167551..12153919   Strand: -
Raw sequence   
>XM_004837483.1
ATGCGCGCTGAGGCTCCCGGAGACAGCGCTCAGGTCCACGGCCTCGCCACCTTTGCTGCTCCGCCGGCCTCGGCTCCGCACACCAGCGCGGGCGGCTCCTCGGGGAACCGGGGTCAAAGTCAGAGTGGTGGTCATGGTCCTGGAGGTGGTAAGAAGGATGACAAGGACAAGAAAAAGAAATATGAACCTCCTGTACCAACTAGAGTGGGAAAAAAGAAGAAGAAAACAAAGGGACCAGATGCTGCCAGCAAACTGCCACTGGTGACACCTCACACTCAGTGCCGCTTAAAACTACTCAAGTTAGAGAGAATTAAAGACTATCTTCTCATGGAGGAAGAATTTATTAGATTTCTTTTTTTCTTTTTGTGTAAAACAGGTAAAACCTTGTTAGCCAAAGCAGTAGCAAACCAAACCTCAGCCACCTTTTTGAGAGTGGTTGGCTCTGAACTTATTCAAAAGTACCTGGGCGATGGGCCCAAACTTGTACGGGAATTATTTCGAGTTGCTGAAGAACATGCACCATCCATCGTGTTTATTGATGAAATCGATGCCATTGGGACCAAAAGATATGATTCAAATTCTGGAGGTGAGAGAGAAATTCAGCGAACAATGTTGGAACTGTTGAACCAGTTGGATGGATTTGATTCACGGGGAGATGTGAAAGTTATCATGGCCACAAACCGAATAGAAACTCTGGATCCAGCACTGATCAGACCAGGGCGCATCGACAGGAAGATTGAGTTCCCCCTGCCTGATGAAAAGACTAAGAAGCGCATCTTTCAGATTCACACAAGCAGGATGACACTGGCCGATGATGTGACCCTGGACGACCTGATCATGGCAAAGGATGATCTCTCTGGTGCTGACATCAAGGCAATCTGTACAGAAGCTGGGCTGATGGCTTTGAGAGAACGCAGAATGAAAGTAACAAATGAAGACTTCAAGAAATCTAAAGAAAATGTTCTTTATAAGAAACAGGAAGGTACCCCTGAGGGGCTGTATCTCTAG

Related Sequences

XP_004837540.1 Protein

Psmc1 PREDICTED: 26S protease regulatory subunit 4 [Heterocephalus glaber]

Length: 335 aa      
>XP_004837540.1
MRAEAPGDSAQVHGLATFAAPPASAPHTSAGGSSGNRGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRFLFFFLCKTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL