Sequence details NCBI ID: XM_004837481.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Catsperb
Gene Name catsper channel auxiliary subunit beta
Entrez Gene ID 101710491

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CATSPERB ENSCPOG00000024727 (Guinea pig)

Gene Details

catsper channel auxiliary subunit beta

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020340, Guinea pig)

Protein Percentage 83.64%
CDS Percentage 87.06%
Ka/Ks Ratio 0.32012 (Ka = 0.1014, Ks = 0.3166)

CATSPERB ENSG00000133962 (Human)

Gene Details

catsper channel auxiliary subunit beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000256343, Human)

Protein Percentage 71.83%
CDS Percentage 81.1%
Ka/Ks Ratio 0.49485 (Ka = 0.1885, Ks = 0.3809)

Catsperb ENSMUSG00000047014 (Mouse)

Gene Details

catsper channel auxiliary subunit beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052089, Mouse)

Protein Percentage 57.25%
CDS Percentage 69.46%
Ka/Ks Ratio 0.41644 (Ka = 0.3353, Ks = 0.8051)

Genome Location

Sequence Coding sequence

Length: 3303 bp    Location: 10973610..11124313   Strand: +
Raw sequence   
>XM_004837481.1
ATGGAATCGCCACTTATATATGTTATAATTTTGCTTTTGAATATGTTGGAATTTTCATCAGGAATGGTATATGATAAAGATGTTATGGAGAAACATTTTGCTTGTTCTAACCAAGGGCTCCCCAAAATTAATGAAATAATGAAGTTGCGTCTATCCTCAAAAAATTTGAAAATCCAGTGTTTTTTCCGAACGGAGAATGAGCTTATTTCCAAGGAAATGCTAAGTACGTTCACATCTGGAGGACTTGCTCCCACCTTGGAAATCATAAATAGTACATATCATGGCATCTTCCACTTTAATTTAACATTGTTGAATGATCGGATTTTCTGGTTAATTGATATTCCTAGAGAAAACATCACAAGTAACACGGATATTGCTGCTGTAGAAGAATGGTTAGTAAAGATCACTTTACATCAAGGATTAAATATTTATGCTATTGAAGGAACCCTATTGGATAGTGTTCGAGAACCTATTCTTCAGTGGAATCTTGGGGATGAAATGTCATCACAAGAGATCAGTGTATTACGTCCACATGTGATAGATCTCAAAGTGACAAAGTGCCCCTGTGCCAATGATATAGCATTACTTGGCTTCCTTTTGAATACAATATATAATGGTGTTTACATAGGCCTCAGCTCATCTGGATTTTGGCATTATAGTGATACGGTGTGGTATAACATGACAAATATCATCTATTCAGCCCTTCGAAGAGAATACACAGGATTATCAGTGATGGATATGGTTTTAACAAATCATTTTCTAGTTCTCCTTACCTCTTTGGGTCTTTTTGTAAGTGGAGATCTTCGTTACCCATCAGCCAAAGACTTAAAGCTTTCCAGGGCAGAATTTTGTGGTTTTGAAAGGGTTGACTATGTCAAAGGAAAATTATGGTATAATGAAAGGTGTTTTGCTAACAGAGAACATTTTGAAGTTGATTATGTTACTATCACCTTTGACAGAAACAAGACCCTAAGTGAGGCAAGCTCTTGTTTTTATAGTAAAGAACCATTTCTTGAGTGGTTATCTTGCTTACCTCATGTTTTCGATGATGTAAAAAATACACTTCCAAGTGAGATAACATTTCTTATTGACCAAGAGCATAATACGGGAATTTACCTCTTCTATGACCAGCACAAGAAAACTACCACAGCCTCTGTGAGCATCTTAAAAAACAACCAACCAAGTGTCACACCAAAATTCCCGCCGTTCCATTTTCCTTCCTCGTTCTCTCACCCCGTTGGAATGGTGTTTCATCCCCGAAGCCACTTTCTATATGCTTATGGCAATCAGGTATGGCTTTCAATGGATGGCGGCAACACTTTTAAATTAATAGCTGACTTTCATGGTGACATAATAAAGAAGATTTATCATTGTTTTTATACTTCAGATGTTACTTTTGTTTCCCAAAGTGGAAAGGTTTACCTGACGAAGGCAGGACTAGGGACATACAGTGAAATTGGAATTGTTACCGATAATGTTTTCACATTATACTATGATCACTTGGGATTCATACATAAACTGACTCCAACTCACTTTGAATCCTCTGAAAATTCCAAAATTTTTGGACAGGTTGCATCTCCTTTTGGGCAGGCTCCTGATATGGGCTTTGAGACTGCACTTGCTCTGCAGTATATCTCCCCTGATGAAATGATCTTTTTTGCATATGTACCTCCAAATGAACCTCGGGAAACTATACACACCAAGAAGTTTAATAATATGCATTTTGGAAAACTGATACACTCCAGTAAAACTGGAACAGCATACATAAGAAAGATACTACAACATGAAACTCCTAAAGAATTTTTGTCCTCAGTTATTGTGGAAATGATACAGCCTTTTGGAGTAGAAGAAGTAAATGAGAGCTCTTGTTTGTCTAGTTCTCTTGTCATAAAAGAAATTAGAAATCCCTTCTATAAACTTACTCTTGATTTACAATCTGTTAACGCCTTGTTTCAAGCTACAGATATAGAGAAAACTGTGGTGATTCCTGGTTACAGCAGCTTCCTGATCACAGAAATTTCAGATGATAAGAATGCATTAGCTATTGCTACCATGCCTGCAATCGCACCCAACAATGTAACCTTTTTAGAGGGTGACTGGTTCTTGTACAACTTTGGGCAAAGGAATGGACGGACATGGAATATATACTCAAAACCATGTCATTATGTGCTTCAACAACTTGATGATTCACCAACCCTGAATTCTGTGAAATACATTGATCTGGGAAGCTCTCAGTCTTTAGGAGTTAAGGTCGTACCTAATAAAAAAGGTCTCAAAACACTTCAAGTACCAACACTGAAAGTATTAGTTGGAAACCCAGAATTGTTGGAAGTTAAAGTTGAAGGCTCTTTTGATGATGCTGATAGTTATCTAATGAAGATTTCCGTAACTAGCAAATCTTTTCGTCAAGGCTCCACTTCACTAGCATTGATTATCTGGGGAGCATCCACTGAATGCTTTGTGACAACGCTGGTGCCAACTTTGAAAAGCAGCTGCAGCTATCTCACTTCTATGCATCATGTTCCTAGCCAACATATCCCATATGAAGACTGGATTAGTGGAGTTCACAAAGACAGTCAGGGTTTTAATCAGATCAAAACCTTGCCGGTAAACTACAGGCCTCCATCTATTATGGGAATTGCTATTCCACTCACAGATAACTTTTATCATGCAGATCCTAGCAAGCCCATACCAAGAAATCTATTTCACAAGTCAAAGGCATTGATCATGCATTCTTTGAGGAATAGAACTGAACACAATAAATTTGCTGTCTCTGTGGCCTTTTCTCTAATAGGAGAGAAGGTTCCTCGTTTTAAGTTTCCAGTTACACAATATCCAATTTCCTTGGAAATTTTCAGTGACAATAAATTTGTTCCAGTGAAATCTCCGTATTTTGTTACTGTGACTGAAGTGAATAGGAGGAAAAACTGGCAACTAAAACACACTATACCAGAAAATATGAAAAAAATTAAAAATTACTTAGAACCAATTCTTCATACTTCAGTGTATAATCCCTCAGGTCTCAATTTAAGTATAAAGGGCTCTGAGCTTTTTCACTTCAGAGTGTCCATCATCCCAGGGGTCACTTTTTGTAACTTAGTTGAAGAATTTCAGATTTATGTTGATGAAGTACCATTGCCATTTCCAGGACATACACTTATTGCTGTTGCAGCAGCCTTTGTGCTAGGGGGATTGATTTTTGCAGCATTTATGCTTCAACTGCATAACATCCACCCATGGAGGGCATTCCAAAGATGGATTAGAAGAAAAAAATCAGCTGTGTCAAATAACCCTGTCACTTAA

Related Sequences

XP_004837538.1 Protein

Catsperb PREDICTED: cation channel sperm-associated protein subunit beta [Heterocephalus glaber]

Length: 1100 aa      
>XP_004837538.1
MESPLIYVIILLLNMLEFSSGMVYDKDVMEKHFACSNQGLPKINEIMKLRLSSKNLKIQCFFRTENELISKEMLSTFTSGGLAPTLEIINSTYHGIFHFNLTLLNDRIFWLIDIPRENITSNTDIAAVEEWLVKITLHQGLNIYAIEGTLLDSVREPILQWNLGDEMSSQEISVLRPHVIDLKVTKCPCANDIALLGFLLNTIYNGVYIGLSSSGFWHYSDTVWYNMTNIIYSALRREYTGLSVMDMVLTNHFLVLLTSLGLFVSGDLRYPSAKDLKLSRAEFCGFERVDYVKGKLWYNERCFANREHFEVDYVTITFDRNKTLSEASSCFYSKEPFLEWLSCLPHVFDDVKNTLPSEITFLIDQEHNTGIYLFYDQHKKTTTASVSILKNNQPSVTPKFPPFHFPSSFSHPVGMVFHPRSHFLYAYGNQVWLSMDGGNTFKLIADFHGDIIKKIYHCFYTSDVTFVSQSGKVYLTKAGLGTYSEIGIVTDNVFTLYYDHLGFIHKLTPTHFESSENSKIFGQVASPFGQAPDMGFETALALQYISPDEMIFFAYVPPNEPRETIHTKKFNNMHFGKLIHSSKTGTAYIRKILQHETPKEFLSSVIVEMIQPFGVEEVNESSCLSSSLVIKEIRNPFYKLTLDLQSVNALFQATDIEKTVVIPGYSSFLITEISDDKNALAIATMPAIAPNNVTFLEGDWFLYNFGQRNGRTWNIYSKPCHYVLQQLDDSPTLNSVKYIDLGSSQSLGVKVVPNKKGLKTLQVPTLKVLVGNPELLEVKVEGSFDDADSYLMKISVTSKSFRQGSTSLALIIWGASTECFVTTLVPTLKSSCSYLTSMHHVPSQHIPYEDWISGVHKDSQGFNQIKTLPVNYRPPSIMGIAIPLTDNFYHADPSKPIPRNLFHKSKALIMHSLRNRTEHNKFAVSVAFSLIGEKVPRFKFPVTQYPISLEIFSDNKFVPVKSPYFVTVTEVNRRKNWQLKHTIPENMKKIKNYLEPILHTSVYNPSGLNLSIKGSELFHFRVSIIPGVTFCNLVEEFQIYVDEVPLPFPGHTLIAVAAAFVLGGLIFAAFMLQLHNIHPWRAFQRWIRRKKSAVSNNPVT