Details from NCBI annotation

Gene Symbol Catsperb
Gene Name catsper channel auxiliary subunit beta
Entrez Gene ID 101710491

Database interlinks

Part of NW_004624734.1 (SequenceType object (1))

For more information consult the page for NW_004624734.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CATSPERBENSCPOG00000024727 (Guinea pig)

Gene Details

catsper channel auxiliary subunit beta

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000020340, Guinea pig)

Protein Percentage 83.64%
CDS Percentage 87.06%
Ka/Ks Ratio 0.32012 (Ka = 0.1014, Ks = 0.3166)

CATSPERBENSG00000133962 (Human)

Gene Details

catsper channel auxiliary subunit beta

External Links

Gene Match(Ensembl Protein ID:ENSP00000256343, Human)

Protein Percentage 71.83%
CDS Percentage 81.1%
Ka/Ks Ratio 0.49485 (Ka = 0.1885, Ks = 0.3809)

CatsperbENSMUSG00000047014 (Mouse)

Gene Details

catsper channel auxiliary subunit beta

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000052089, Mouse)

Protein Percentage 57.25%
CDS Percentage 69.46%
Ka/Ks Ratio 0.41644 (Ka = 0.3353, Ks = 0.8051)

Genome Location

Sequence SequenceType object (2)

Length: 3303 bp    Location: 10973610..11124313   Strand: +
>XM_004837481.1
ATGGAATCGCCACTTATATATGTTATAATTTTGCTTTTGAATATGTTGGAATTTTCATCAGGAATGGTATATGATAAAGATGTTATGGAGAAACATTTTGCTTGTTCTAACCAAGGGCTCCCCAAAATTAATGAAATAATGAAGTTGCGTCTATCCTCAAAAAATTTGAAAATCCAGTGTTTTTTCCGAACGGAGAATGAGCTTATTTCCAAGGAAATGCTAAGTACGTTCACATCTGGAGGACTTGCTCCCACCTTGGAAATCATAAATAGTACATATCATGGCATCTTCCACTTTAATTTAACATTGTTGAATGATCGGATTTTCTGGTTAATTGATATTCCTAGAGAAAACATCACAAGTAACACGGATATTGCTGCTGTAGAAGAATGGTTAGTAAAGATCACTTTACATCAAGGATTAAATATTTATGCTATTGAAGGAACCCTATTGGATAGTGTTCGAGAACCTATTCTTCAGTGGAATCTTGGGGATGAAATGTCATCACAAGAGATCAGTGTATTACGTCCACATGTGATAGATCTCAAAGTGACAAAGTGCCCCTGTGCCAATGATATAGCATTACTTGGCTTCCTTTTGAATACAATATATAATGGTGTTTACATAGGCCTCAGCTCATCTGGATTTTGGCATTATAGTGATACGGTGTGGTATAACATGACAAATATCATCTATTCAGCCCTTCGAAGAGAATACACAGGATTATCAGTGATGGATATGGTTTTAACAAATCATTTTCTAGTTCTCCTTACCTCTTTGGGTCTTTTTGTAAGTGGAGATCTTCGTTACCCATCAGCCAAAGACTTAAAGCTTTCCAGGGCAGAATTTTGTGGTTTTGAAAGGGTTGACTATGTCAAAGGAAAATTATGGTATAATGAAAGGTGTTTTGCTAACAGAGAACATTTTGAAGTTGATTATGTTACTATCACCTTTGACAGAAACAAGACCCTAAGTGAGGCAAGCTCTTGTTTTTATAGTAAAGAACCATTTCTTGAGTGGTTATCTTGCTTACCTCATGTTTTCGATGATGTAAAAAATACACTTCCAAGTGAGATAACATTTCTTATTGACCAAGAGCATAATACGGGAATTTACCTCTTCTATGACCAGCACAAGAAAACTACCACAGCCTCTGTGAGCATCTTAAAAAACAACCAACCAAGTGTCACACCAAAATTCCCGCCGTTCCATTTTCCTTCCTCGTTCTCTCACCCCGTTGGAATGGTGTTTCATCCCCGAAGCCACTTTCTATATGCTTATGGCAATCAGGTATGGCTTTCAATGGATGGCGGCAACACTTTTAAATTAATAGCTGACTTTCATGGTGACATAATAAAGAAGATTTATCATTGTTTTTATACTTCAGATGTTACTTTTGTTTCCCAAAGTGGAAAGGTTTACCTGACGAAGGCAGGACTAGGGACATACAGTGAAATTGGAATTGTTACCGATAATGTTTTCACATTATACTATGATCACTTGGGATTCATACATAAACTGACTCCAACTCACTTTGAATCCTCTGAAAATTCCAAAATTTTTGGACAGGTTGCATCTCCTTTTGGGCAGGCTCCTGATATGGGCTTTGAGACTGCACTTGCTCTGCAGTATATCTCCCCTGATGAAATGATCTTTTTTGCATATGTACCTCCAAATGAACCTCGGGAAACTATACACACCAAGAAGTTTAATAATATGCATTTTGGAAAACTGATACACTCCAGTAAAACTGGAACAGCATACATAAGAAAGATACTACAACATGAAACTCCTAAAGAATTTTTGTCCTCAGTTATTGTGGAAATGATACAGCCTTTTGGAGTAGAAGAAGTAAATGAGAGCTCTTGTTTGTCTAGTTCTCTTGTCATAAAAGAAATTAGAAATCCCTTCTATAAACTTACTCTTGATTTACAATCTGTTAACGCCTTGTTTCAAGCTACAGATATAGAGAAAACTGTGGTGATTCCTGGTTACAGCAGCTTCCTGATCACAGAAATTTCAGATGATAAGAATGCATTAGCTATTGCTACCATGCCTGCAATCGCACCCAACAATGTAACCTTTTTAGAGGGTGACTGGTTCTTGTACAACTTTGGGCAAAGGAATGGACGGACATGGAATATATACTCAAAACCATGTCATTATGTGCTTCAACAACTTGATGATTCACCAACCCTGAATTCTGTGAAATACATTGATCTGGGAAGCTCTCAGTCTTTAGGAGTTAAGGTCGTACCTAATAAAAAAGGTCTCAAAACACTTCAAGTACCAACACTGAAAGTATTAGTTGGAAACCCAGAATTGTTGGAAGTTAAAGTTGAAGGCTCTTTTGATGATGCTGATAGTTATCTAATGAAGATTTCCGTAACTAGCAAATCTTTTCGTCAAGGCTCCACTTCACTAGCATTGATTATCTGGGGAGCATCCACTGAATGCTTTGTGACAACGCTGGTGCCAACTTTGAAAAGCAGCTGCAGCTATCTCACTTCTATGCATCATGTTCCTAGCCAACATATCCCATATGAAGACTGGATTAGTGGAGTTCACAAAGACAGTCAGGGTTTTAATCAGATCAAAACCTTGCCGGTAAACTACAGGCCTCCATCTATTATGGGAATTGCTATTCCACTCACAGATAACTTTTATCATGCAGATCCTAGCAAGCCCATACCAAGAAATCTATTTCACAAGTCAAAGGCATTGATCATGCATTCTTTGAGGAATAGAACTGAACACAATAAATTTGCTGTCTCTGTGGCCTTTTCTCTAATAGGAGAGAAGGTTCCTCGTTTTAAGTTTCCAGTTACACAATATCCAATTTCCTTGGAAATTTTCAGTGACAATAAATTTGTTCCAGTGAAATCTCCGTATTTTGTTACTGTGACTGAAGTGAATAGGAGGAAAAACTGGCAACTAAAACACACTATACCAGAAAATATGAAAAAAATTAAAAATTACTTAGAACCAATTCTTCATACTTCAGTGTATAATCCCTCAGGTCTCAATTTAAGTATAAAGGGCTCTGAGCTTTTTCACTTCAGAGTGTCCATCATCCCAGGGGTCACTTTTTGTAACTTAGTTGAAGAATTTCAGATTTATGTTGATGAAGTACCATTGCCATTTCCAGGACATACACTTATTGCTGTTGCAGCAGCCTTTGTGCTAGGGGGATTGATTTTTGCAGCATTTATGCTTCAACTGCATAACATCCACCCATGGAGGGCATTCCAAAGATGGATTAGAAGAAAAAAATCAGCTGTGTCAAATAACCCTGTCACTTAA

Related Sequences

XP_004837538.1 SequenceType object (4)

Catsperb PREDICTED: cation channel sperm-associated protein subunit beta [Heterocephalus glaber]

Length: 1100 aa     
>XP_004837538.1
MESPLIYVIILLLNMLEFSSGMVYDKDVMEKHFACSNQGLPKINEIMKLRLSSKNLKIQCFFRTENELISKEMLSTFTSGGLAPTLEIINSTYHGIFHFNLTLLNDRIFWLIDIPRENITSNTDIAAVEEWLVKITLHQGLNIYAIEGTLLDSVREPILQWNLGDEMSSQEISVLRPHVIDLKVTKCPCANDIALLGFLLNTIYNGVYIGLSSSGFWHYSDTVWYNMTNIIYSALRREYTGLSVMDMVLTNHFLVLLTSLGLFVSGDLRYPSAKDLKLSRAEFCGFERVDYVKGKLWYNERCFANREHFEVDYVTITFDRNKTLSEASSCFYSKEPFLEWLSCLPHVFDDVKNTLPSEITFLIDQEHNTGIYLFYDQHKKTTTASVSILKNNQPSVTPKFPPFHFPSSFSHPVGMVFHPRSHFLYAYGNQVWLSMDGGNTFKLIADFHGDIIKKIYHCFYTSDVTFVSQSGKVYLTKAGLGTYSEIGIVTDNVFTLYYDHLGFIHKLTPTHFESSENSKIFGQVASPFGQAPDMGFETALALQYISPDEMIFFAYVPPNEPRETIHTKKFNNMHFGKLIHSSKTGTAYIRKILQHETPKEFLSSVIVEMIQPFGVEEVNESSCLSSSLVIKEIRNPFYKLTLDLQSVNALFQATDIEKTVVIPGYSSFLITEISDDKNALAIATMPAIAPNNVTFLEGDWFLYNFGQRNGRTWNIYSKPCHYVLQQLDDSPTLNSVKYIDLGSSQSLGVKVVPNKKGLKTLQVPTLKVLVGNPELLEVKVEGSFDDADSYLMKISVTSKSFRQGSTSLALIIWGASTECFVTTLVPTLKSSCSYLTSMHHVPSQHIPYEDWISGVHKDSQGFNQIKTLPVNYRPPSIMGIAIPLTDNFYHADPSKPIPRNLFHKSKALIMHSLRNRTEHNKFAVSVAFSLIGEKVPRFKFPVTQYPISLEIFSDNKFVPVKSPYFVTVTEVNRRKNWQLKHTIPENMKKIKNYLEPILHTSVYNPSGLNLSIKGSELFHFRVSIIPGVTFCNLVEEFQIYVDEVPLPFPGHTLIAVAAAFVLGGLIFAAFMLQLHNIHPWRAFQRWIRRKKSAVSNNPVT