Details from NCBI annotation

Gene Symbol L3hypdh
Gene Name L-3-hydroxyproline dehydratase (trans-), transcript variant X1
Entrez Gene ID 101725460

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

L3HYPDH ENSCPOG00000014476 (Guinea pig)

Gene Details

L-3-hydroxyproline dehydratase (trans-)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013042, Guinea pig)

Protein Percentage 89.27%
CDS Percentage 88.32%
Ka/Ks Ratio 0.18326 (Ka = 0.0633, Ks = 0.3456)

L3HYPDH ENSG00000126790 (Human)

Gene Details

L-3-hydroxyproline dehydratase (trans-)

External Links

Gene Match (Ensembl Protein ID: ENSP00000247194, Human)

Protein Percentage 88.42%
CDS Percentage 86.16%
Ka/Ks Ratio 0.14076 (Ka = 0.0675, Ks = 0.4796)

L3hypdh ENSMUSG00000019718 (Mouse)

Gene Details

L-3-hydroxyproline dehydratase (trans-)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019862, Mouse)

Protein Percentage 85.88%
CDS Percentage 82.96%
Ka/Ks Ratio 0.12179 (Ka = 0.0825, Ks = 0.6773)

L3hypdh ENSRNOG00000004503 (Rat)

Gene Details

L-3-hydroxyproline dehydratase (trans-) (L3hypdh), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006284, Rat)

Protein Percentage 87.01%
CDS Percentage 82.39%
Ka/Ks Ratio 0.09539 (Ka = 0.0763, Ks = 0.8001)

Genome Location

Sequence Coding sequence

Length: 1065 bp    Location: 41625931..41634884   Strand: +
>XM_004837459.1
ATGCAGAGCGCGGTGGCCTGGCCCCGCCTGCCCCCTCACGACCCGGACACGCCGGTGCTGTCGGTGGTGGATATGCACACTGGCGGCGAGCCCCTGCGCATCGTGCTGGCCGGGTGCCCCGAGGTGGTCGGGCCCACCCTGCTGGCCAAGCGGCGCTACATGCGCGAGCACCTGGACCGCGTGCGCCGCCGTCTACTGCTCGAGCCCCGGGGCCACCGGGACATGTACGGGGCGGTGCTGGTGCGCAGCGAGCTGCCCGAAGCGCACCTGGGCGCGCTGTTCCTGCACAACGCGGGCTACAGCTCCATGTGCGGCCACGCCGTGCTGGCCCTCGGCCGCTTCGCGCTGGACTTCGGGCTGCTGCCCGCGCCCCCCGACGGCTCGTGCGAGGCCCGCGTCAACATCCACTGCCCCTGCGGGCTGGTGACCGCCTTCGTGGCGTGTGAGGGCGGCCGCAGCTGTGGCCCAGTGCGCTTCCACAGCGTCCCGGCCTTCGTGCTGGCCTCAGATCTCATGGTGGATGTTCCTAGACACGGGAAGGTGGTGGTGGACATTGCCTATGGCGGTGCCTTTTATGCCTTCGTTAGTGCGAGACAGTTAGGACTTGATGTCCGTTCTGCCAGGACGAGGGACCTTGTGGACACCGCAAGTGCAGTGACCGCAGCGGTGAAAGCTCAGTTTAAAATTACTCACCCCGAGAGTGAAGACCTTGCCTTTCTATATGGAACCATATTAACAGATGGGAAAGATGCTTATGATGAGGAACCAACCACCAACATCTGTGTGTTTGCTGATGAACAGGTTGACAGAAGCCCCACCGGCTCAGGAGTGACAGCCCGTATTGCGTTGCAGTATCATAAAGGCCTCGTAGGCCTGAACCAGCCCAGGGCCTTTAAAAGCAGTGCGACGGGCTCCGTGTTCACAGGCAGTGCCGTGAGGGAAGCAAAATGTGGTGATTTCAAAGCTGTTATAGTGGAGGTATCGGGACAAGCCCATTACACAGGTACAGCAAGCTTTACAGTAGAAGATGACGACCCACTGAAAGATGGGTTTCTTCTCAAGTGA

Related Sequences

XP_004837516.1 Protein

L3hypdh PREDICTED: trans-L-3-hydroxyproline dehydratase isoform X1 [Heterocephalus glaber]

Length: 354 aa      View alignments
>XP_004837516.1
MQSAVAWPRLPPHDPDTPVLSVVDMHTGGEPLRIVLAGCPEVVGPTLLAKRRYMREHLDRVRRRLLLEPRGHRDMYGAVLVRSELPEAHLGALFLHNAGYSSMCGHAVLALGRFALDFGLLPAPPDGSCEARVNIHCPCGLVTAFVACEGGRSCGPVRFHSVPAFVLASDLMVDVPRHGKVVVDIAYGGAFYAFVSARQLGLDVRSARTRDLVDTASAVTAAVKAQFKITHPESEDLAFLYGTILTDGKDAYDEEPTTNICVFADEQVDRSPTGSGVTARIALQYHKGLVGLNQPRAFKSSATGSVFTGSAVREAKCGDFKAVIVEVSGQAHYTGTASFTVEDDDPLKDGFLLK