Details from NCBI annotation

Gene Symbol Gphn
Gene Name gephyrin, transcript variant X4
Entrez Gene ID 101725958

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPHN ENSCPOG00000013223 (Guinea pig)

Gene Details

gephyrin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011903, Guinea pig)

Protein Percentage 98.91%
CDS Percentage 96.36%
Ka/Ks Ratio 0.04574 (Ka = 0.0061, Ks = 0.1342)

GPHN ENSG00000171723 (Human)

Gene Details

gephyrin

External Links

Gene Match (Ensembl Protein ID: ENSP00000417901, Human)

Protein Percentage 100.0%
CDS Percentage 96.29%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.1474)

Gphn ENSMUSG00000047454 (Mouse)

Gene Details

gephyrin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000106018, Mouse)

Protein Percentage 99.86%
CDS Percentage 94.02%
Ka/Ks Ratio 0.00247 (Ka = 0.0006, Ks = 0.2582)

Gphn ENSRNOG00000028366 (Rat)

Gene Details

gephyrin

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064099, Rat)

Protein Percentage 99.67%
CDS Percentage 93.38%
Ka/Ks Ratio 0.00545 (Ka = 0.0016, Ks = 0.2843)

Genome Location

Sequence Coding sequence

Length: 2211 bp    Location: 34484891..33871664   Strand: -
>XM_004837378.1
ATGGCGACCGAGGGAATGATCCTCACTAACCACGACCATCAAATCCGTGTCGGAGTCCTCACAGTGAGTGATAGTTGCTTCAGGAATCTTGCAGAAGATCGTAGCGGGATAAATCTTAAAGATCTTGTACAAGATCCTTCTTTGTTGGGTGGGACTATATCAGCATACAAGATAGTACCAGACGAAATAGAAGAAATCAAGGAAACTCTGATAGATTGGTGTGATGAAAAGGAACTTAATTTGATATTAACAACTGGAGGAACAGGGTTTGCACCACGAGATGTCACTCCAGAGGCCACAAAAGAAGTAATAGAACGGGAAGCACCAGGGATGGCCCTGGCAATGCTGATGGGATCACTTAATGTTACACCTCTGGGCATGCTCTCTAGGCCTGTATGTGGAATTAGAGGGAAAACTCTCATAATTAACCTACCAGGTAGCAAGAAAGGATCTCAGGAATGCTTTCAGTTCATACTGCCAGCTCTACCTCATGCCATTGACCTTTTACGTGATGCCATTGTAAAAGTAAAGGAGGTGCATGATGAACTTGAAGATTTACCTTCCCCACCACCTCCACTTTCCCCTCCTCCCACAACCAGCCCCCATAAACAGACAGAAGACAAAGGGGTGCAGTGTGAGGAAGAGGAAGAGGAGAAGAAAGACAGTGGTGTTGCTTCAACAGAAGATAGTTCATCATCACATATAACTGCAGCAGCCATTGCTGCCAAGATTCCAGACTCCATCATTTCTCGTGGTGTTCAGGTGCTCCCACGAGACACAGCCTCACTCAGCACTACTCCTTCAGAATCGCCTCGTGCTCAAGCTACATCTCGCCTTTCTACAGCTTCCTGCCCAACACCAAAAGTCCAGTCCAGGTGCAGCAGCAAGGAAAACATTCTCAGAGCCAGTCACAGTGCTGTTGATATCACCAAGGTGGCTAGAAGACACCGCATGTCTCCTTTTCCTCTGACATCTATGGACAAAGCCTTTATCACAGTCCTGGAGATGACTCCGGTGCTTGGGACAGAAATCATCAATTACCGAGATGGAATGGGGCGAGTACTTGCTCAAGATGTATATGCAAAAGACAACCTACCCCCTTTCCCAGCGTCAGTAAAAGATGGCTATGCTGTTCGAGCCGCTGATGGTCCAGGAGATCGTTTCATCATTGGGGAATCCCAAGCTGGTGAACAGCCAACTCAGACAGTAATGCCAGGACAAGTCATGCGGGTTACAACAGGTGCTCCAATCCCCTGCGGTGCTGATGCAGTAGTACAAGTGGAAGATACCGAACTAATCAGGGAATCAGATGATGGCACTGAAGAACTTGAAGTGCGAATTCTAGTGCAGGCTCGGCCAGGCCAAGATATTAGACCCATCGGCCATGACATTAAAAGAGGAGAATGCGTTTTGGCCAAAGGAACCCACATGGGCCCCTCAGAAATCGGTCTCCTGGCAACTGTAGGAGTCACAGAGGTTGAAGTTAATAAGTTTCCAGTTGTTGCAGTCATGTCAACAGGGAATGAGCTGCTAAATCCCGAAGATGACCTCTTACCAGGAAAGATTCGAGACAGCAATCGTTCAACCCTCCTAGCAACAATTCAGGAACATGGTTACCCCACAATCAACTTGGGAATTGTGGGAGACAACCCTGATGACTTACTCAATGCCTTGAATGAGGGAATCAGTCGTGCTGATGTCATCATCACATCAGGGGGTGTATCCATGGGAGAAAAGGACTATCTCAAGCAGGTGCTGGACATTGATCTTCATGCTCAGATCCATTTTGGCAGGGTTTTTATGAAACCAGGCCTGCCAACAACATTTGCAACTTTGGATATTGATGGTGTAAGAAAAATTATTTTTGCACTACCAGGGAATCCTGTATCAGCCGTGGTCACCTGCAATCTCTTTGTTGTGCCTGCACTGAGAAAGATGCAGGGCATCTTGGATCCTCGGCCAACCATCATCAAAGCCAGGTTATCCTGTGATGTAAAACTGGATCCTCGCCCAGAATATCATCGGTGTATATTGACTTGGCATCACCAAGAACCACTACCTTGGGCACAGAGTACAGGTAATCAGATGAGCAGCCGTCTGATGAGCATGCGCAGTGCCAATGGGTTGTTGATGCTACCTCCAAAGACAGAGCAGTATGTGGAGCTCCACAAGGGTGAGGTGGTGGATGTCATGGTCATTGGACGGCTATGA

Related Sequences

XP_004837435.1 Protein

Gphn PREDICTED: gephyrin isoform X4 [Heterocephalus glaber]

Length: 736 aa      View alignments
>XP_004837435.1
MATEGMILTNHDHQIRVGVLTVSDSCFRNLAEDRSGINLKDLVQDPSLLGGTISAYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFAPRDVTPEATKEVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEEEEKKDSGVASTEDSSSSHITAAAIAAKIPDSIISRGVQVLPRDTASLSTTPSESPRAQATSRLSTASCPTPKVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTQTVMPGQVMRVTTGAPIPCGADAVVQVEDTELIRESDDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVNKFPVVAVMSTGNELLNPEDDLLPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGVRKIIFALPGNPVSAVVTCNLFVVPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL