Sequence details NCBI ID: XM_004837348.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vti1b
Gene Name vesicle transport through interaction with t-SNAREs 1B
Entrez Gene ID 101717467

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000002685 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002438, Guinea pig)

Protein Percentage 90.91%
CDS Percentage 92.5%
Ka/Ks Ratio 0.29592 (Ka = 0.0511, Ks = 0.1726)

Genome Location

Sequence Coding sequence

Length: 699 bp    Location: 33299636..33321199   Strand: +
Raw sequence   
>XM_004837348.1
ATGGCCGCCTCCGCCGCCTCCTCGGAGCATTTTGAGAAGCTGCACGAGATCTTCCGCGGCCTCCATGAAGACCTACTGGGGGTGCCCGAGCGGCTGCTGGGGACCGCCGGGACCGAGGAGAAGAAGAAGTTGATCAGAGATTTTGGTGAAAAGCAGCAGGAAGCAAATGAAACGCTGGCAGAGATGGAGGAGGAACTACGGTATGCACCCCTGTCTTTCCGTAACCCCATGATGTCTAAGCTGCGAAACTACCGGAAGGACCTTGCCAAACTGCATCGGGAGGTGAGAGCCACACCTTTGACAGCCATACCTGGGGGCCGAGGAGACATGAAGTATGACACATATGTTGTGGAGAATGAGCATATGAATCGGCTACAGTCTCAGAGGGCACTGCTTCTGCAAGGCACTGAAAGCCTCAACAGGACCACCCAGAGTATTGAGCGGTCTCATCGGATTGCCACAGAGACTGACCAGATTGGCTCAGAAATTATAGAAGAGCTGGGGGAACAGCGAGACCAGCTGGAACGCACCAAGAGCAGACTGGTAAACACAAGTGAAAACTTGAGCAAAAGTCGAAAGATTCTCCGTTCAATGTCCAGAAAAGTGACAACCAACAAGCTGCTGCTTTCCATTGTCATCTTACTGGAGCTCGTCATCCTGGGAGGCCTGGTTTATTACAAGTTCTTTCGCAAGCATTGA

Related Sequences

XP_004837405.1 Protein

Vti1b PREDICTED: vesicle transport through interaction with t-SNAREs homolog 1B [Heterocephalus glaber]

Length: 232 aa      
>XP_004837405.1
MAASAASSEHFEKLHEIFRGLHEDLLGVPERLLGTAGTEEKKKLIRDFGEKQQEANETLAEMEEELRYAPLSFRNPMMSKLRNYRKDLAKLHREVRATPLTAIPGGRGDMKYDTYVVENEHMNRLQSQRALLLQGTESLNRTTQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLLSIVILLELVILGGLVYYKFFRKH