Details from NCBI annotation

Gene Symbol Actn1
Gene Name actinin, alpha 1, transcript variant X2
Entrez Gene ID 101711839

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ACTN1 ENSCPOG00000001107 (Guinea pig)

Gene Details

actinin, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001002, Guinea pig)

Protein Percentage 99.66%
CDS Percentage 94.62%
Ka/Ks Ratio 0.00376 (Ka = 0.0014, Ks = 0.3735)

ACTN1 ENSG00000072110 (Human)

Gene Details

actinin, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000377941, Human)

Protein Percentage 99.33%
CDS Percentage 94.06%
Ka/Ks Ratio 0.00655 (Ka = 0.0028, Ks = 0.4249)

Actn1 ENSMUSG00000015143 (Mouse)

Gene Details

actinin, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021554, Mouse)

Protein Percentage 99.1%
CDS Percentage 91.22%
Ka/Ks Ratio 0.00592 (Ka = 0.0038, Ks = 0.6457)

Actn1 ENSRNOG00000004309 (Rat)

Gene Details

actinin, alpha 1 (Actn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061058, Rat)

Protein Percentage 99.22%
CDS Percentage 91.37%
Ka/Ks Ratio 0.00538 (Ka = 0.0034, Ks = 0.6266)

Genome Location

Sequence Coding sequence

Length: 2679 bp    Location: 32097616..32189657   Strand: +
>XM_004837337.1
ATGGACCATTATGATTCTCAGCAAACCAACGACTACATGCAGCCCGAAGAGGACTGGGACCGGGACCTGCTCCTGGACCCGGCCTGGGAGAAGCAGCAAAGAAAGACCTTTACTGCATGGTGCAACTCCCACCTCCGGAAGGCAGGGACACAGATTGAGAACATCGAGGAGGACTTCCGAGACGGCCTGAAGCTCATGCTGCTGCTAGAAGTCATCTCAGGTGAACGCTTGGCCAAGCCGGAGAGAGGCAAGATGCGAGTGCACAAGATCTCCAACGTGAACAAGGCATTGGATTTCATAGCCAGCAAAGGGGTCAAACTGGTGTCCATTGGAGCCGAAGAAATTGTGGATGGGAATGTGAAAATGACCCTGGGCATGATCTGGACCATCATCCTTCGCTTTGCCATCCAGGACATCTCTGTGGAAGAGACCTCTGCCAAGGAAGGGCTGCTCCTGTGGTGTCAGAGGAAGACAGCCCCTTACAAAAACGTCAACATCCAGAACTTCCACATCAGTTGGAAGGACGGCCTCGGCTTCTGTGCCTTGATACACCGACACCGGCCTGAGCTTATCGACTATGGCAAGCTGCGGAAGGACGATCCACTCACAAACCTGAACACAGCCTTCGATGTGGCAGAGAAGTACCTGGATATCCCTAAGATGCTGGATGCTGAAGACATCGTTGGAACTGCCCGGCCCGATGAGAAAGCCATCATGACTTATGTGTCCAGCTTCTATCACGCCTTCTCTGGAGCCCAGAAGGCGGAAACAGCAGCAAATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAACTTATGGAAGACTATGAGAAGCTGGCCAGCGATCTGTTGGAGTGGATCCGCCGCACCATCCCGTGGCTGGAGAACCGGGCGCCTGAGAACACCATGCACGCCATGCAGCAGAAGCTGGAGGACTTCCGAGACTACCGGCGCCTGCACAAGCCACCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTTCGGCTCAGCAACCGGCCCGCCTTCATGCCATCAGAGGGCAGGATGGTCTCGGATATCAACAATGCTTGGGGCTGCCTGGAGCAGGCGGAGAAGGGCTACGAGGAGTGGCTGTTGAATGAGATCCGGAGGCTGGAGCGGCTTGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACGGACGGCAAAGAGGCCATGTTACGGCAGAAGGACTACGAGACGGCCACCCTGTCAGAGATCAAGGCCCTGCTCAAGAAGCATGAGGCCTTTGAGAGCGACCTGGCCGCCCACCAGGACCGAGTGGAGCAGATCGCAGCCATCGCACAGGAGCTCAATGAGCTGGACTATTACGACTCTCCCAGTGTCAATGCTCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGCCCTAACTCAGAAGCGGAGGGAAGCTCTGGAGCGGACAGAGAAGCTGCTGGAGACCATTGACCAGCTGTACTTGGAGTACGCCAAGCGGGCTGCACCCTTCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATCGTGCACACCATTGAGGAGATCCAGGGGCTGACCACAGCCCACGAGCAGTTCAAGGCCACCCTCCCTGATGCGGACAAGGAGCGCTTGGCCATCTTGGGCATCCACAATGAGGTGTCCAAGATTGTCCAGACCTACCACGTCAACATGGCGGGCACCAACCCCTACACAACCATCACTCCTCAGGAGATCAACGGCAAATGGGACCACGTTCGACAGCTGGTGCCACGGAGGGACCAGGCTCTGACAGAGGAGCATGCCCGTCAGCAGCACAATGAGAGGCTCCGCAAGCAGTTCGCAGCCCAGGCCAACGTCATTGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATCTCCATTGAGATGCACGGGACCCTGGAGGACCAGCTCAACCACCTGCGGCAGTATGAGAAGAGCATCGTCAACTACAAGCCAAAGATCGACCAGCTAGAGGGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTTGACAACAAGCATACCAACTACACCATGGAGCACATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCAGGACCATCAACGAGGTGGAGAACCAGATCCTGACCCGGGATGCCAAGGGCATCAGCCAGGAGCAGATGAACGAGTTCCGGGCCTCCTTCAACCACTTCGACCGGGACCACTCCGGCACGCTGGGTCCCGAGGAATTCAAAGCCTGCCTCATCAGCTTGGGCTATGATATTGGCAACGACCCCCAGGGAGAGGCAGAATTTGCCCGAATCATGAGCATTGTGGACCCAAACCGCCTGGGGGTAGTGACATTCCAGGCCTTCATTGACTTCATGTCCCGAGAGACGGCTGACACAGATACAGCAGACCAGGTCATGGCTTCCTTCAAGATCCTGGCTGGAGACAAGAACTACATCACGGTGGACGAACTACGCCGGGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCGCGCATGGCCCCGTACGCCGGCCCCGACTCGGTGCCCGGTGCTCTGGACTATATGTCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTCTAA

Related Sequences

XP_004837394.1 Protein

Actn1 PREDICTED: alpha-actinin-1 isoform X2 [Heterocephalus glaber]

Length: 892 aa      View alignments
>XP_004837394.1
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENRAPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFAAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYAGPDSVPGALDYMSFSTALYGESDL