Sequence details NCBI ID: XM_004837320.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Plekhd1
Gene Name pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, transcript variant X1
Entrez Gene ID 101706304

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PLEKHD1 ENSCPOG00000020733 (Guinea pig)

Gene Details

pleckstrin homology domain containing, family D (with coiled-coil domains) member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019668, Guinea pig)

Protein Percentage 97.32%
CDS Percentage 95.24%
Ka/Ks Ratio 0.05529 (Ka = 0.0126, Ks = 0.2275)

PLEKHD1 ENSG00000175985 (Human)

Gene Details

pleckstrin homology domain containing, family D (with coiled-coil domains) member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000317175, Human)

Protein Percentage 95.45%
CDS Percentage 93.15%
Ka/Ks Ratio 0.04889 (Ka = 0.0195, Ks = 0.3986)

Plekhd1 ENSMUSG00000066438 (Mouse)

Gene Details

pleckstrin homology domain containing, family D (with coiled-coil domains) member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000119711, Mouse)

Protein Percentage 95.45%
CDS Percentage 89.97%
Ka/Ks Ratio 0.03068 (Ka = 0.0197, Ks = 0.6408)

Plekhd1 ENSRNOG00000038297 (Rat)

Gene Details

pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 (Plekhd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000055103, Rat)

Protein Percentage 95.05%
CDS Percentage 90.89%
Ka/Ks Ratio 0.04204 (Ka = 0.0217, Ks = 0.5173)

Genome Location

Sequence Coding sequence

Length: 1521 bp    Location: 31593351..31556897   Strand: -
Raw sequence   
>XM_004837320.1
ATGTTCTCGTCCAAGTCCAACTCCGTGTCGCCGTCGCCGTCCCTGGAGCAGGCCGACTCGGACGCGCTGGACATCAGCACCAAAGTGCAGCTCTACGGGGTGCTGTGGAAGCGGCCCTTCGGGAGGCCGTCGGCCAAGTGGTCCCGGCGGTTTTTCATCATCAAGGAGAGCTTTCTCCTTTACTACTCTGAGAGCGAAAAAAAGAGCTTTGAAACCAACAAATACTTCAATATACATCCTAAGGGTGTCATCCCTTTGGGGGGCTGCCTGGTGGAGGCCAAGGAAGAGCCCAGCATGCCCTATGCCATGAAGATCTCACACCAGGACTTCCATGGCAATGTCCTGCTGGCCGCCGAGTCCGAGTTTGAGCAGACACAGTGGCTGGAAATGCTGCAGGAGTCTGGGAAGGTGACCTGGAAGAATGCCCAGCTGGGAGAAGCTATGATCAAAAGCCTGGAGGCCCAGGGGCTGCAGTTGGCTAAAGAAAAGCAGGAGTATTTAGACAAACTGATGGAAGAGACCGAAGAACTGTGCCTTCAGAGGGAGCAGAGAGAGGAACTTGAGCGCCTGAACCAGGTGCTGGAGGCCGAGAAGCAGCAGTTTGAGGAGGTGGTGCAGGAGCTGAGAGTGGAGCAGGAGCAGATCAAGAGGGAACTAGAACTCACTGCAAGATGCCTCAAGGGTGTGGAACAAGAGAAAAAGGAACTGAGGCAGCTCACGGAATCTTTGCAGCAGACACTGGAGGAACTCTCCATAGAGAAGAAGAAAACCCTGGAAATGCTGGAGGAGGATGAGAACCAGCTGCAGTCACTGGCCAATCAGAGTGAGCAGCTGTCTGCCATTGGGGGTCTCCATAGCAACCTAAGGCAGATTGAGGATCGGATTCAGCAGCTCTTGACAGAGAAGCTTCTGGCGGAGAAGCGGATGAAGGAGAATGAGGAGCGCTCACGGGCCCTGGAGGAGGAGCGGGAGTTCTACTCCAGCCAGTCCCGGGCGCTGCAGAACTCACTGCAGGAGCTGACAGCAGAGAAGCAGCAGGCTGAGCGGGAGCTCAAGGCTGAGGTGAAGGTCCGCATGGACCTGGAGAGACGTCTGCGGGAGGCAGAGGGCGCTTTGCAGAGCCTGGAACAAGGGCTCAACTCCAAGGTGCGGAATAAGGAGAAGGAGGAGAGGATGCGGGCTGATGTGAGCCACCTGAAAAGGTTTTTCGAGGAGTGCATCCGGAATGCAGAGCTGGAGGCCAAGATGCCGGTCATCATGAAGAACTCGGTGTACATTCACAAGGCGGCCACTCGCCGCATCAAGAGCTGCCGCTTCCACCGGCGCCGGTCCAGCACCTCCTGGAATGACATGAAGCCGTCCCAGTCCTTCATGACCTCCCAGCTGGAAGCCAACAACATAGAGGAGCTAAAGGAAGTGGCCAAGCGGCTCAGCCGGGACCAGCGCTTCCGGGAATCCATCTACCACATCATGGCCACCCAGCCTGGAGCCGCTTCTGTGCTTCCCCGGGGTGGAAAGTGA

Related Sequences

XP_004837377.1 Protein

Plekhd1 PREDICTED: pleckstrin homology domain-containing family D member 1 isoform X1 [Heterocephalus glaber]

Length: 506 aa      View alignments
>XP_004837377.1
MFSSKSNSVSPSPSLEQADSDALDISTKVQLYGVLWKRPFGRPSAKWSRRFFIIKESFLLYYSESEKKSFETNKYFNIHPKGVIPLGGCLVEAKEEPSMPYAMKISHQDFHGNVLLAAESEFEQTQWLEMLQESGKVTWKNAQLGEAMIKSLEAQGLQLAKEKQEYLDKLMEETEELCLQREQREELERLNQVLEAEKQQFEEVVQELRVEQEQIKRELELTARCLKGVEQEKKELRQLTESLQQTLEELSIEKKKTLEMLEEDENQLQSLANQSEQLSAIGGLHSNLRQIEDRIQQLLTEKLLAEKRMKENEERSRALEEEREFYSSQSRALQNSLQELTAEKQQAERELKAEVKVRMDLERRLREAEGALQSLEQGLNSKVRNKEKEERMRADVSHLKRFFEECIRNAELEAKMPVIMKNSVYIHKAATRRIKSCRFHRRRSSTSWNDMKPSQSFMTSQLEANNIEELKEVAKRLSRDQRFRESIYHIMATQPGAASVLPRGGK