Details from NCBI annotation

Gene Symbol Smoc1
Gene Name SPARC related modular calcium binding 1, transcript variant X6
Entrez Gene ID 101701555

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMOC1 ENSCPOG00000008973 (Guinea pig)

Gene Details

SPARC related modular calcium binding 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008062, Guinea pig)

Protein Percentage 98.84%
CDS Percentage 95.04%
Ka/Ks Ratio 0.024 (Ka = 0.0052, Ks = 0.2174)

SMOC1 ENSG00000198732 (Human)

Gene Details

SPARC related modular calcium binding 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000355110, Human)

Protein Percentage 95.86%
CDS Percentage 91.26%
Ka/Ks Ratio 0.04864 (Ka = 0.0189, Ks = 0.3895)

Smoc1 ENSMUSG00000021136 (Mouse)

Gene Details

SPARC related modular calcium binding 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105976, Mouse)

Protein Percentage 95.13%
CDS Percentage 88.79%
Ka/Ks Ratio 0.05115 (Ka = 0.0268, Ks = 0.5243)

Smoc1 ENSRNOG00000005998 (Rat)

Gene Details

SPARC related modular calcium binding 1 (Smoc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007947, Rat)

Protein Percentage 94.69%
CDS Percentage 88.5%
Ka/Ks Ratio 0.0492 (Ka = 0.0269, Ks = 0.5462)

Genome Location

Sequence Coding sequence

Length: 1386 bp    Location: 31199880..31052502   Strand: -
>XM_004837312.1
ATGCTCCCCGCGCGCTGCGTCCGCCTGCTCACGCCCCACTTGCTGCTCGTGTTGGTGCAGCTGTCCCTGGCTCGCGGCCACCGCACCACCGGCCCCAGGTTTCTAATAAGTGACCGGGACCCCCAGTGTAACCTCCACTGCTCCAGGACTCAGCCCAAACCCATCTGTGCCTCTGATGGCAGGTCTTATGAGTCCATGTGTGAGTACCAGCAAGCCAAGTGCCGAGACCCGACCCTGAGTGTGGTCCATCGAGGTCGATGCAAGGATGCTGGCCAGAGCAAGTGTCGCCTGGAGCGGGCCCAAGCCCTAGAGCAGGCCAAGAAGCCACAGGAAGCAGTGTTTGTCCCAGAGTGTGGTGAAGATGGCTCCTTTACCCAGGTGCAGTGCCATACCTACACAGGGTACTGCTGGTGTGTCACCCCAGATGGGAAACCTATCAGTGGTTCTTCTGTGCAGAACAAAACTCCTGTATGTTCAGGTTCAGTCACTGACAAGCCCTCGAGCCAGGTTAACTCAGGAAAGAAAGATGACGGGTCAAAGCCAACACCCACGATGGAGACCCAGCCAGTGTTTGATGGAGATGAAATCACAGCCCCCACCCTATGGATTAAGCACTTGGTAATCAAGGACTCCAAACTGAACAACACGAATGTAAGAAATTCAGAGAAAGTACACTCATGTGACCAGGAAAGGCAGAGCGCCTTGGAAGAGGCCCGGCAGAATCCCCGGGAGGGCATCGTCATCCCTGAGTGTGCCCCTGGGGGGCTGTACAAGCCAGTGCAGTGCCACCAGTCGACTGGCTACTGCTGGTGTGTGCTAGTGGACACGGGGCGCCCGCTGCCTGGGACGTCCACACGCTATGTGATGCCCAGCTGCGAGAGTGATGCCAGAGCCAAGAGCGCGGAGGTAGAAGATCCCTTCAAGGACAGGGAGCTGCCAGGTTGCCCAGAGGGGAAGAAAATGGAATTTATTACCAGCCTGCTGGATGCGCTTACCACTGACATGGTTCAGGCCATTAACTCAGCAGTGCCCACTGGAGGTGGGAGGTTCTCAGAGCCAGACCCCAGCCACACTCTGGAGGAGCGTGTGGTGCACTGGTACTTCAGCCAGCTGGACAGCAACAGCAGCAATGACATCAACAAGCGGGAGATGAAGCCCTTCAAGCGCTATGTGAAAAAGAAAGCCAAGCCCAAGAAATGCGCCCGACGTTTCACTGACTATTGTGACCTGAACAAGGACAAGGTCATCTCACTGCCTGAGCTGAAGGGCTGCCTGGGTGTCAGCAAGGAAGGTGGTAGCCTTGGCAGCTTCCCCCAGGGAAAACGAGCAGGCACAAACCCATTCAGTAAGTTACTTTCTTTTTGGGCTCCTCTCTTTCCCCTGTGA

Related Sequences

XP_004837369.1 Protein

Smoc1 PREDICTED: SPARC-related modular calcium-binding protein 1 isoform X6 [Heterocephalus glaber]

Length: 461 aa      View alignments
>XP_004837369.1
MLPARCVRLLTPHLLLVLVQLSLARGHRTTGPRFLISDRDPQCNLHCSRTQPKPICASDGRSYESMCEYQQAKCRDPTLSVVHRGRCKDAGQSKCRLERAQALEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSGSVTDKPSSQVNSGKKDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNVRNSEKVHSCDQERQSALEEARQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKSAEVEDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAVPTGGGRFSEPDPSHTLEERVVHWYFSQLDSNSSNDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELKGCLGVSKEGGSLGSFPQGKRAGTNPFSKLLSFWAPLFPL