Details from NCBI annotation

Gene Symbol Lin52
Gene Name lin-52 homolog (C. elegans), transcript variant X3
Entrez Gene ID 101703070

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LIN52 ENSCPOG00000003170 (Guinea pig)

Gene Details

lin-52 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002870, Guinea pig)

Protein Percentage 98.77%
CDS Percentage 93.83%
Ka/Ks Ratio 0.01962 (Ka = 0.0055, Ks = 0.2822)

LIN52 ENSG00000205659 (Human)

Gene Details

lin-52 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000451812, Human)

Protein Percentage 100.0%
CDS Percentage 93.94%
Ka/Ks Ratio 0.001 (Ka = 0.0003, Ks = 0.2709)

Lin52 ENSMUSG00000085793 (Mouse)

Gene Details

lin-52 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133045, Mouse)

Protein Percentage 100.0%
CDS Percentage 90.0%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.5253)

Lin52 ENSRNOG00000043441 (Rat)

Gene Details

Protein Lin52; Similar to CG15929-PA (Predicted), isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061629, Rat)

Protein Percentage 99.09%
CDS Percentage 90.0%
Ka/Ks Ratio 0.0071 (Ka = 0.004, Ks = 0.5657)

Genome Location

Sequence Coding sequence

Length: 333 bp    Location: 27498881..27404948   Strand: -
>XM_004837210.1
ATGGCGTCTCCCACTGACGATTTGGAAGCATCTTTGCTAAGTTTTGAAAAACTTGATCGAGCCTCACCAGATCTTTGGCCAGAACAATTGCCAGGTGTTGCTGAATTTGCAGCTTCCTTCAAAAGTCCTATTACTAGTTCTCCACCTAAGTGGATGGCTGAAATAGAACGTGATGACATTGATATGTTAAAAGAACTCGGGAGCCTAACAACAGCTAATTTGATGGAGAAGGTTCGAGGCCTACAGAACCTGGCCTATCAGCTGGGGCTGGATGAGTCCAGAGAGATGACACGAGGGAAATTTCTCAACATTCTAGAGAAGCCCAAGAAGTAG

Related Sequences

XP_004837267.1 Protein

Lin52 PREDICTED: protein lin-52 homolog isoform X3 [Heterocephalus glaber]

Length: 110 aa      View alignments
>XP_004837267.1
MASPTDDLEASLLSFEKLDRASPDLWPEQLPGVAEFAASFKSPITSSPPKWMAEIERDDIDMLKELGSLTTANLMEKVRGLQNLAYQLGLDESREMTRGKFLNILEKPKK