Details from NCBI annotation

Gene Symbol Abcd4
Gene Name ATP-binding cassette, sub-family D (ALD), member 4, transcript variant X1
Entrez Gene ID 101701894

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCD4 ENSCPOG00000004776 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004299, Guinea pig)

Protein Percentage 93.02%
CDS Percentage 92.19%
Ka/Ks Ratio 0.12738 (Ka = 0.0352, Ks = 0.2767)

ABCD4 ENSG00000119688 (Human)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000349396, Human)

Protein Percentage 89.87%
CDS Percentage 89.76%
Ka/Ks Ratio 0.13128 (Ka = 0.0494, Ks = 0.3764)

Abcd4 ENSMUSG00000021240 (Mouse)

Gene Details

ATP-binding cassette, sub-family D (ALD), member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021666, Mouse)

Protein Percentage 88.54%
CDS Percentage 87.54%
Ka/Ks Ratio 0.11184 (Ka = 0.057, Ks = 0.5097)

Abcd4 ENSRNOG00000011964 (Rat)

Gene Details

ATP-binding cassette, subfamily D (ALD), member 4 (Abcd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016040, Rat)

Protein Percentage 88.7%
CDS Percentage 87.65%
Ka/Ks Ratio 0.10929 (Ka = 0.0566, Ks = 0.5176)

Genome Location

Sequence Coding sequence

Length: 1809 bp    Location: 27309303..27323912   Strand: +
>XM_004837204.1
ATGGCAGTTCCAAGGCCCGCTCCCAGAACTGGCGCCAGGCCCAAGTTAGATCTGCAATTTCTCCAGCGGTTCCTGAGGATACAGAAGGTCTTGTTTCCTTCTTGGTCATCACAGAATGTCTTGATGTTCCTGACTCTCTTGTGTGTGGCTCTGCTGGAACAATTGGTGATCTACCAGGTTGGCTTGGTCCCCAGTCAGTACTATGGTGTCCTGGGAAATAAAGACTTGGATGGGTTTAAGGCGCTGACATTCCTGGCTGTCGTGCTCATCGTTCTCAACTCCACACTGAAGAGCTTTGACCAGTTCATCTCCAGCCTGCTGTACGTGAGCTGGAGGAAGGACCTCACCGAGCACCTGCACCGCCTCTACTTCCGGGCCCGTGTGTACTACACCCTCAACGTGCTACGGGATGACATCGACAATCCGGACCAGCGCATCAGCCAGGATGTGGAGCGGCTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTGATCATCTCCCCTTTCACCCTCATTTACTACACTTTCCAGTGCTTCCAGAGCACAGGCTGGCTTGGGCCTATGAGCATCTTTGGGTATTTCATCCTGGGAACCATAGTGAACAAGACTTTGATGGGGCCCATCGTGGCAAAGCTGATGCAGCAGGAAAAGCTGGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCTGAGCCTGCTGCTTTCTACAGAGCCGGGCATGTGGAGCACATGAGGACAGACCGCAGGCTTCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATTGGTGTCAACACCTTTGACTATATGGGCAGCGTCCTGAGTTACATTGTCATCTCAATCCCCATTTTCAGCGGGGTCTATGGAGACTTGAGCCCCACCGAGCTTAGCACCCTGGTCAGCAAGAATGCATTCGTGTGCATCTACCTCATCAGCTGTTTCACCAAGCTCATTGACCTCTCCACCACACTCTCGGACGTGGCTGGTTACACGCACAGGCTTGGGGAGCTGCAGGAGGCCCTGCTGGACATTTTCCTGACATCGCAGGACTGTGAGAGTGAGCAGGGCTTGGACAGGGCCCCAGGATGGCCGGCGCCCGAGGCCTCGGACACAGCTTTTCTCCTAGAGCGGGTCTGCATCTCGGCCCCCTCCTCTGACAAACCCCTGGTCAAGGACCTGACCCTGAAGATCTGCGAGGGGCAGAGTCTGCTCATCACGGGCAACACGGGCACCGGCAAGACCTCCTTGCTGCGGGTTCTGGGCAGCCTCTGGGCCAGCACCCGGGGCTCCGTGCAGATGTTGACCGACTTTGGGCCCCATGGGGTACTGTTCCTGCCACAAAAGCCATTCTTCACTGACGGGACCCTCCGGGAGCAGGTGATCTATCCCCTGAAGGAGATCTACCCGGACTCAGGTTCTACTGATGATGAAAGGATCCTGAGGTTCTTGGAATTGGCAGGCCTGTCCAGCTTGGTGGCAAGGACAGAGGGTCTGGACCAGCAGGTGGATTGGAACTGGTACGATGTCCTGTCCCCAGGGGAGATGCAAAGGCTCTCTTTTGCTCGACTCTTCTACCTGCAGCCAAAGTATGCAGTGCTTGATGAAGCCACCAGCGCCCTGACGGAGGAGGTTGAGAGTGAGCTCTACCACATCGGCCAGCAGCTAGGGATGACGTTCATCAGCGTGGGACATCGGCCCAGCCTGGAGAAGTTTCACTCCTGGGTTCTGAAACTCTGTGGAGGAGGAAGATGGGAGCTGACAAGAATCAAAGTGGAGTGA

Related Sequences

XP_004837261.1 Protein

Abcd4 PREDICTED: ATP-binding cassette sub-family D member 4 isoform X1 [Heterocephalus glaber]

Length: 602 aa      View alignments
>XP_004837261.1
MAVPRPAPRTGARPKLDLQFLQRFLRIQKVLFPSWSSQNVLMFLTLLCVALLEQLVIYQVGLVPSQYYGVLGNKDLDGFKALTFLAVVLIVLNSTLKSFDQFISSLLYVSWRKDLTEHLHRLYFRARVYYTLNVLRDDIDNPDQRISQDVERLCRQLSSMASKLIISPFTLIYYTFQCFQSTGWLGPMSIFGYFILGTIVNKTLMGPIVAKLMQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGVNTFDYMGSVLSYIVISIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTKLIDLSTTLSDVAGYTHRLGELQEALLDIFLTSQDCESEQGLDRAPGWPAPEASDTAFLLERVCISAPSSDKPLVKDLTLKICEGQSLLITGNTGTGKTSLLRVLGSLWASTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERILRFLELAGLSSLVARTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYHIGQQLGMTFISVGHRPSLEKFHSWVLKLCGGGRWELTRIKVE