Details from NCBI annotation

Gene Symbol Zc2hc1c
Gene Name zinc finger, C2HC-type containing 1C, transcript variant X3
Entrez Gene ID 101721759

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZC2HC1C ENSCPOG00000003986 (Guinea pig)

Gene Details

zinc finger, C2HC-type containing 1C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003597, Guinea pig)

Protein Percentage 85.99%
CDS Percentage 91.55%
Ka/Ks Ratio 0.58726 (Ka = 0.0771, Ks = 0.1312)

ZC2HC1C ENSG00000119703 (Human)

Gene Details

zinc finger, C2HC-type containing 1C

External Links

Gene Match (Ensembl Protein ID: ENSP00000435550, Human)

Protein Percentage 72.26%
CDS Percentage 84.34%
Ka/Ks Ratio 0.66705 (Ka = 0.1614, Ks = 0.242)

Zc2hc1c ENSMUSG00000045064 (Mouse)

Gene Details

zinc finger, C2HC-type containing 1C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051664, Mouse)

Protein Percentage 70.91%
CDS Percentage 79.25%
Ka/Ks Ratio 0.32975 (Ka = 0.1759, Ks = 0.5334)

Zc2hc1c ENSRNOG00000027115 (Rat)

Gene Details

zinc finger, C2HC-type containing 1C (Zc2hc1c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009156, Rat)

Protein Percentage 71.48%
CDS Percentage 80.28%
Ka/Ks Ratio 0.36263 (Ka = 0.1712, Ks = 0.4721)

Genome Location

Sequence Coding sequence

Length: 1575 bp    Location: 26612644..26604009   Strand: -
>XM_004837179.1
ATGGCTGGTCTCCAGTTGGCTCCTCAACTGCCTGTGGGCGTTATGTTCCCACATAATAAAGCAGCCGCTCCAGGGCTCCACTCAGCCAAGCAAGACCCTTATGAACAAGGTGACTCTTCCCAGCAGTCCTCCATGGGGCACCTGAAGAGTTTTCAGCAGAAGCCTTTGAACAAGAAAGAGCTGGCACTGGATAATGTCTACACTCACCCCAAATGGAACACCTGCACAAAAGCCCGGAGCTACTCCTATTCCCACTGTGCTGGAATCAGCCAGCGAAACTCGGGAAGCAATCCCCAGGGCCAAGGAAAGGGCTTCTTGTACTCTTCAAGCCCTCAGTCCGGGTATCCCAAAGCAAATGACCAAGACTTCATCCCCTTTACAAAGAAGCGAGTTGGGGTGGACCGGGCCTACCCCTTGAAGCCTGTGGTCCACCGGAAGTCTCATAGTACAGGGGAGGCTGGCACTGACAGGAACCAGAATGTCTACCCAAGACCCCCTGACCCAAGAGAGTTTTCAGACAGCAATTTTGGTTTGAGGAACTGGGTGAATTCATCTGTTCTGGCTTCCATGCAGGGGGAGGCCATGGCAAACCTCCACAGGACCAACTGGATGCAGGTCCAAAGACTAGAAGCTGCAGGGGAGAGCTTAGAGGAGGAAATCCGAAGAAAGGAGAGTCTCCTGAGGGAAAAGCTGAAGAAGACAGAGGAAGAACTCAGAAGGATCCAGAGGGAAAAGGAACAGGCGAAGGAAAATGAAGAGCAAGAGCTGCAGAGAATGATACAACTCAGAAGAGATAAAGGCAGTAACATTACCATCATATACAAGCCTGTCTTTTCCCCAGAATTTGGGACTGAAGAGGTGTCCAGTAGAGACAGGAGAGAGGATGAAACTTGGGGACAGCCTCAGGAAAATTCTAGTCCAATCCAGTTCTCTGATTATGGAATCCAGAAATTCAAAAAGGAAAGGCTAGTGGCAATCAGTAAAATCCAAGACCAAGCCTCAAGGCCATTGGTGGAGGAGTTCTTTCAGCCTTCAGAAGAAGCAGGCAGTAATTTGCAGGGATCCACCAGAAGTTCTAGCTTGTCCAGGGCACCAGAGTCCTCGCGTTCCAGTGGCTCCACTGAAGAGCCAGAACTGGGCAAGTGCAGCCACTGTGGGCGCACATTTCTCTTGCTCAGGCTGGAGAGACACTCCACCATCTGCAGCAAGATGCAGGGTTCCAAGAGGAAAGTGTTTAACTCCTCCAGAGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAATGGGCCAGCCACAGTCAAGGCTGAGCCTCCTCAGAAGAACAACTGGAGACAGAAGCATGAATCTTTCATCTGTACCCTCCGTCAGGCACGAGAGATCCAGCAGGTCATTGCCAAAGGTGGAAACCCCTCAGACTTGCCTCCCATCCTGCCTGCAGAAAACCCAGACTATGTTCAGTGTTCTCACTGTAGCCGTCACTTTGCTCCCAAGGTAGCTGAGCGACACATTCCCAAGTGTAAGACCATTAGGAACCGTCCTCCACCTCCAAGAAAGCACCATAGTTGA

Related Sequences

XP_004837236.1 Protein

Zc2hc1c PREDICTED: zinc finger C2HC domain-containing protein 1C isoform X3 [Heterocephalus glaber]

Length: 524 aa      View alignments
>XP_004837236.1
MAGLQLAPQLPVGVMFPHNKAAAPGLHSAKQDPYEQGDSSQQSSMGHLKSFQQKPLNKKELALDNVYTHPKWNTCTKARSYSYSHCAGISQRNSGSNPQGQGKGFLYSSSPQSGYPKANDQDFIPFTKKRVGVDRAYPLKPVVHRKSHSTGEAGTDRNQNVYPRPPDPREFSDSNFGLRNWVNSSVLASMQGEAMANLHRTNWMQVQRLEAAGESLEEEIRRKESLLREKLKKTEEELRRIQREKEQAKENEEQELQRMIQLRRDKGSNITIIYKPVFSPEFGTEEVSSRDRREDETWGQPQENSSPIQFSDYGIQKFKKERLVAISKIQDQASRPLVEEFFQPSEEAGSNLQGSTRSSSLSRAPESSRSSGSTEEPELGKCSHCGRTFLLLRLERHSTICSKMQGSKRKVFNSSRARAKGTELEQYLNWNGPATVKAEPPQKNNWRQKHESFICTLRQAREIQQVIAKGGNPSDLPPILPAENPDYVQCSHCSRHFAPKVAERHIPKCKTIRNRPPPPRKHHS