Sequence details NCBI ID: XM_004837170.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmed10
Gene Name transmembrane emp24-like trafficking protein 10 (yeast)
Entrez Gene ID 101719423

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMED10 ENSCPOG00000004567 (Guinea pig)

Gene Details

transmembrane emp24-like trafficking protein 10 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004117, Guinea pig)

Protein Percentage 97.72%
CDS Percentage 93.76%
Ka/Ks Ratio 0.0537 (Ka = 0.0127, Ks = 0.2368)

TMED10 ENSG00000170348 (Human)

Gene Details

transmembrane emp24-like trafficking protein 10 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000303145, Human)

Protein Percentage 94.06%
CDS Percentage 91.02%
Ka/Ks Ratio 0.09974 (Ka = 0.032, Ks = 0.3205)

Tmed10 ENSMUSG00000021248 (Mouse)

Gene Details

transmembrane emp24-like trafficking protein 10 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037583, Mouse)

Protein Percentage 94.52%
CDS Percentage 89.8%
Ka/Ks Ratio 0.05428 (Ka = 0.0267, Ks = 0.4914)

Tmed10 ENSRNOG00000007901 (Rat)

Gene Details

transmembrane emp24-like trafficking protein 10 (yeast) (Tmed10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010512, Rat)

Protein Percentage 94.98%
CDS Percentage 88.74%
Ka/Ks Ratio 0.04351 (Ka = 0.0247, Ks = 0.5671)

Genome Location

Sequence Coding sequence

Length: 660 bp    Location: 26514594..26549374   Strand: +
Raw sequence   
>XM_004837170.1
ATGACTGGTTTGTCTGGCCCACAATGCCGGCCTGGCCCTGGCCCGTTGGCGTTGTTGTTTTTGTTCCTGCTCGGCCCCAGCTCGGTCCTCGGCATCTCTTTCTATCTCCCCATTAATTCTCGCAAGTGTCTCCGCGAGGAGATCCACAAGGACCTGCTCGTGACCGGCGCGTACGAGATCACCGACCAGTCTGGGGGCGCTGGCGGCCTGCGGACCCACCTCAAGATCACAGATTCTGCTGGCCATATTCTGTACTCCAAGGAAGATGCATCCAAGGGGAAATTTGCCTTTACCACTGAAGATTATGACATGTTTGAAGTGTGTTTTGAGAGCAAAGGCACAGGGCGGATACCTGACCAACTTGTGATCCTAGACATGAAACATGGAGTAGAGGCGAAGAATTACGAAGAGATTGCAAAAGTGGAGAAGCTCAAACCACTAGAAGTGGAGCTACGACGCCTAGAAGACCTTTCTGAGTCCATTGTTAACGATTTTGCCTACATGAAGAAGAGAGAGGAGGAGATGCGTGATACCAATGAGTCAACAAACACCCGGGTCCTGTATTTCAGCATCTTTTCAATGTTCTGCCTTATCGGACTAGCCACTTGGCAGGTCTTCTACCTGCGTCGCTTCTTCAAGGCCAAGAAGTTGATTGAGTAA

Related Sequences

XP_004837227.1 Protein

Tmed10 PREDICTED: transmembrane emp24 domain-containing protein 10 [Heterocephalus glaber]

Length: 219 aa      View alignments
>XP_004837227.1
MTGLSGPQCRPGPGPLALLFLFLLGPSSVLGISFYLPINSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYSKEDASKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEEIAKVEKLKPLEVELRRLEDLSESIVNDFAYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFKAKKLIE