Details from NCBI annotation

Gene Symbol Ift43
Gene Name intraflagellar transport 43 homolog (Chlamydomonas), transcript variant X2
Entrez Gene ID 101712307

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFT43 ENSCPOG00000006095 (Guinea pig)

Gene Details

intraflagellar transport 43 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005499, Guinea pig)

Protein Percentage 93.69%
CDS Percentage 92.19%
Ka/Ks Ratio 0.12788 (Ka = 0.032, Ks = 0.2501)

IFT43 ENSG00000119650 (Human)

Gene Details

intraflagellar transport 43 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSP00000238628, Human)

Protein Percentage 72.82%
CDS Percentage 82.22%
Ka/Ks Ratio 0.38112 (Ka = 0.1587, Ks = 0.4164)

Ift43 ENSMUSG00000007867 (Mouse)

Gene Details

intraflagellar transport 43 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061891, Mouse)

Protein Percentage 82.56%
CDS Percentage 83.76%
Ka/Ks Ratio 0.16746 (Ka = 0.0997, Ks = 0.5956)

Ift43 ENSRNOG00000010194 (Rat)

Gene Details

intraflagellar transport 43 homolog (Chlamydomonas) (Ift43), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013560, Rat)

Protein Percentage 78.02%
CDS Percentage 81.87%
Ka/Ks Ratio 0.21724 (Ka = 0.1315, Ks = 0.6053)

Genome Location

Sequence Coding sequence

Length: 588 bp    Location: 25713887..25628744   Strand: -
>XM_004837153.1
ATGGACGATGTGCTGGACCTGGGCGAGGAGCGGCGCCGGGGCTCGGCCACCTCCGGGGCCAAGATGGGTCGCCGAGCTCAATTGGAGTCTACTCAGGCCGACAGTCACTTCAGTGGCAAGAGTTCCTCATTGACTCTGGCTGGAGAGGCTCCTCCCCCCAAACCACCTCGCAGGATGGGAGGCTGGACAGATGATTCCACAAGGACGTCGAATCACCGGCTCAGACAGCAGAGCCTAGATGGATCAGATGATGGAGATATTCCTATCATTCCTGACCTGGAAGAAGTACAGGAAGAAGACTTTGTTTTGCAGGTGGCATCCCCTCCCAGTGTCCAGGTAAACCGGGTTATGACCTACCGTGACCTGGACAATGACCTCATGAAGTACTCGGCCTTTCAGACCTTGGATGGTGAGATCGACCTGAAACTCCTCACCAAAGTGCTGGTGCCAGAGCACGAAGTGCGAGAGGAGGATGTCGGCTGGGATTGGGACCATCTGTACACGGAGGTGTCCTCAGAGCTCCTCAGTGAGTGGGACCTGCTGCAGACAGAGAAGGAGGACCCCACTGGGCCTCTGAGGCAGACCTGA

Related Sequences

XP_004837210.1 Protein

Ift43 PREDICTED: intraflagellar transport protein 43 homolog isoform X2 [Heterocephalus glaber]

Length: 195 aa      View alignments
>XP_004837210.1
MDDVLDLGEERRRGSATSGAKMGRRAQLESTQADSHFSGKSSSLTLAGEAPPPKPPRRMGGWTDDSTRTSNHRLRQQSLDGSDDGDIPIIPDLEEVQEEDFVLQVASPPSVQVNRVMTYRDLDNDLMKYSAFQTLDGEIDLKLLTKVLVPEHEVREEDVGWDWDHLYTEVSSELLSEWDLLQTEKEDPTGPLRQT