Details from NCBI annotation

Gene Symbol Slirp
Gene Name SRA stem-loop interacting RNA binding protein
Entrez Gene ID 101701662

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLIRP ENSCPOG00000001500 (Guinea pig)

Gene Details

SRA stem-loop interacting RNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001356, Guinea pig)

Protein Percentage 69.72%
CDS Percentage 82.57%
Ka/Ks Ratio 0.66679 (Ka = 0.1908, Ks = 0.2862)

SLIRP ENSG00000119705 (Human)

Gene Details

SRA stem-loop interacting RNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000450909, Human)

Protein Percentage 58.72%
CDS Percentage 74.92%
Ka/Ks Ratio 0.44553 (Ka = 0.2641, Ks = 0.5927)

Slirp ENSMUSG00000021040 (Mouse)

Gene Details

SRA stem-loop interacting RNA binding protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000125341, Mouse)

Protein Percentage 61.26%
CDS Percentage 75.38%
Ka/Ks Ratio 0.43788 (Ka = 0.2598, Ks = 0.5933)

Slirp ENSRNOG00000012314 (Rat)

Gene Details

SRA stem-loop interacting RNA binding protein (Slirp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016479, Rat)

Protein Percentage 63.96%
CDS Percentage 74.77%
Ka/Ks Ratio 0.33922 (Ka = 0.2514, Ks = 0.7412)

Genome Location

Sequence Coding sequence

Length: 336 bp    Location: 24196903..24191947   Strand: -
>XM_004837118.1
ATGGCAGCCTCGGTATCGAGGGGTACCGTGGCACTGCGTACGAATTTTACTCGGCGGGTTGCTTTTGTCTGGAAAATTCCTTGGACTGCAACAGTCAATGAGCTGAGAAAACACTTTACTCAGTTTGGCCATATACAAAAGTGCATTCTTCCTTTTGATAAAGAGACTGGCTTTCATAAAGGTATGTGTTGGATTTACTTTTCTTCTTCAGAAGCACTTCAGAATGCAGTGCAACATGAAAATCACGTAATTGATGGAGTAAAGGTCCACATTCAAGTTCAAAAACCAAAAATTTTGCAAGGGGATCAAACATCTGATGAAGAGAAAGATTTCTGA

Related Sequences

XP_004837175.1 Protein

Slirp PREDICTED: SRA stem-loop-interacting RNA-binding protein, mitochondrial [Heterocephalus glaber]

Length: 111 aa      View alignments
>XP_004837175.1
MAASVSRGTVALRTNFTRRVAFVWKIPWTATVNELRKHFTQFGHIQKCILPFDKETGFHKGMCWIYFSSSEALQNAVQHENHVIDGVKVHIQVQKPKILQGDQTSDEEKDF