Details from NCBI annotation

Gene Symbol Gtf2a1
Gene Name general transcription factor IIA, 1, 19/37kDa, transcript variant X1
Entrez Gene ID 101726447

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF2A1 ENSCPOG00000003370 (Guinea pig)

Gene Details

general transcription factor IIA, 1, 19/37kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003046, Guinea pig)

Protein Percentage 98.63%
CDS Percentage 94.63%
Ka/Ks Ratio 0.0262 (Ka = 0.0062, Ks = 0.2362)

GTF2A1 ENSG00000165417 (Human)

Gene Details

general transcription factor IIA, 1, 19/37kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000452454, Human)

Protein Percentage 98.67%
CDS Percentage 93.71%
Ka/Ks Ratio 0.03099 (Ka = 0.0078, Ks = 0.2504)

Gtf2a1 ENSRNOG00000004300 (Rat)

Gene Details

general transcription factor IIA, 1 (Gtf2a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005873, Rat)

Protein Percentage 98.14%
CDS Percentage 91.76%
Ka/Ks Ratio 0.02313 (Ka = 0.0088, Ks = 0.3786)

Genome Location

Sequence Coding sequence

Length: 1131 bp    Location: 20795558..20828158   Strand: +
>XM_004837104.1
ATGGCGAACTCGGCAAATACAAACACCGTGCCTAAATTGTATAGGTCTGTGATTGAAGATGTTATTAATGATGTGAGAGACATCTTTCTGGATGATGGAGTGGATGAACAAGTCTTGATGGAACTAAAAACCCTATGGGAGAGTAAACTGATGCAGTCTAGGGCAGTAGATGGATTTCATTCAGAAGAACAGCAGCTTTTATTGCAAGTTCAGCAACAGCATCAACCCCAGCAGCAGCAACACCACCACCACCACCACCATCAGCAAGCTCAACCTCAGCAGACGGTACCTCAACAAGCACAGACCCAGCAGGTCCTTATTCCTGCATCACAGCAAGCCACAGCACCACAAGTTATTGTTCCTGATTCTAAGCTGATACAACATATGAATGCCTCAAACATGAGTGCCGCTGCTACAGCTGCTACCTTGGCCCTCCCTGCAGGTGTGACTCCTGTTCAACAGATTTTAACAAATTCAGGCCAGCTTCTTCAGGTGGTCAGAGCAGCCAATGGTGCCCAGTATATCTTTCAGCCTCAGCAGTCAGTGGTTCTACAACAACAGGTTATACCACAAATGCAGCCTGGGGGTGTACAAGCTCCTGTCATACAACAGGTTCTAGCCCCTCTTCCTGGAGGAATTTCACCACAGACAGGTGTCATTATCCAGCCTCAGCAAATCTTATTTACAGGAAATAAGACTCAAGTTATACCTACGACAGTGGCGGCACCTACTGCGGCACAAGCACAGATCACTGCAGCTGGTCAGCAGCAGCCACAGGCACAACCTACCCAACAGCAAGCTCCACTGGTCTTACAAGTTGATGGAACTGGAGATACATCATCCGAGGAAGATGAAGATGAGGAAGAAGACTATGATGATGATGAAGAGGAAGACAAAGAGAAAGATGGAGCTGAAGATGGGCAGGTGGAAGAAGAGCCCCTCAATAGTGAAGATGATGTGAGTGATGAGGAAGGGCAGGAACTCTTTGACACAGAAAATGTTGTTGTATGCCAGTATGATAAGATACACAGAAGTAAAAACAAATGGAAATTTCATCTCAAGGATGGCATTATGAATCTTAATGGAAGAGATTATATATTTTCCAAAGCCATTGGAGATGCAGAATGGTGA

Related Sequences

XP_004837161.1 Protein

Gtf2a1 PREDICTED: transcription initiation factor IIA subunit 1 isoform X1 [Heterocephalus glaber]

Length: 376 aa     
>XP_004837161.1
MANSANTNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWESKLMQSRAVDGFHSEEQQLLLQVQQQHQPQQQQHHHHHHHQQAQPQQTVPQQAQTQQVLIPASQQATAPQVIVPDSKLIQHMNASNMSAAATAATLALPAGVTPVQQILTNSGQLLQVVRAANGAQYIFQPQQSVVLQQQVIPQMQPGGVQAPVIQQVLAPLPGGISPQTGVIIQPQQILFTGNKTQVIPTTVAAPTAAQAQITAAGQQQPQAQPTQQQAPLVLQVDGTGDTSSEEDEDEEEDYDDDEEEDKEKDGAEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNLNGRDYIFSKAIGDAEW