Sequence details NCBI ID: XM_004837100.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sel1l
Gene Name sel-1 suppressor of lin-12-like (C. elegans), transcript variant X1
Entrez Gene ID 101724591

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SEL1L ENSCPOG00000009870 (Guinea pig)

Gene Details

sel-1 suppressor of lin-12-like (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008855, Guinea pig)

Protein Percentage 94.7%
CDS Percentage 92.6%
Ka/Ks Ratio 0.10721 (Ka = 0.026, Ks = 0.2424)

SEL1L ENSG00000071537 (Human)

Gene Details

sel-1 suppressor of lin-12-like (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000337053, Human)

Protein Percentage 95.59%
CDS Percentage 90.92%
Ka/Ks Ratio 0.05936 (Ka = 0.0215, Ks = 0.363)

Sel1l ENSMUSG00000020964 (Mouse)

Gene Details

sel-1 suppressor of lin-12-like (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021347, Mouse)

Protein Percentage 93.91%
CDS Percentage 87.73%
Ka/Ks Ratio 0.0597 (Ka = 0.0324, Ks = 0.5428)

Sel1l ENSRNOG00000004464 (Rat)

Gene Details

sel-1 suppressor of lin-12-like (C. elegans) (Sel1l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043232, Rat)

Protein Percentage 93.31%
CDS Percentage 86.83%
Ka/Ks Ratio 0.06755 (Ka = 0.0389, Ks = 0.5755)

Genome Location

Sequence Coding sequence

Length: 2382 bp    Location: 20532690..20595784   Strand: +
Raw sequence   
>XM_004837100.1
ATGCAGGTCCGGGTCGGGCTGACTCTGCTGCTCTGTGCGGTGCTACTGGGCTCGGCCTCGCCGTCCTCGGATGAAGAAGGCAACCAGGATGAATCCTTAGATTCTAAGACTTCTTTGCCATCAGATGAGTCAGTAAAGGACCACACTACCACAGGCAGAGTAGTTGCTGGTCAGATATTTGTTGATTCAGAAGAATCAGAATTGGAATCCCCCATTCAAGAAGAGGAAAATAGCCTCAAGAGCCAGGAAGGGAAAAGTGCCACAGAAGAAATCAGCTTTCTAGAATCTCCAAATCCAGAAAAGGACTATGAAGCACCAAAGAAAGTACGGAAACCAGCCTTGACTGCCATTGAAGGCACAGCACACGGGGAACCCTGCCACTTCCCTTTTCTTTTCCTGGATATGGAATATGTTGCGTGTACATCCGATGGGCGGGAAGATGGCAGACTGTGGTGTGCTACAACCTATGACTACGGAACTGATGAGAAGTGGGGCTTCTGTGAAACTGAGGAAGAGGCTGCTAGGAGACGGCAAATGGAGGAAGCAGAAATGCTGTATCAGACTGGGATGAAAATCCTCAATGGAAGCAACAAAAAAAGCCAAAAAAGAGAAGCATATCGGTATCTTCAAAAGGCAGCAAGCATGAACCATACCAAGGCTCTGGAGAGAGTGTCCTATGCCCTTTTGTTTGGGGATTACATGACACAGAATATCCAGGCAGCTAAAGAGATGTTTGAGAAGCTGACTGAGGACGGCTCCCCCAAAGGGCAGACTGGTCTTGGCTTTCTGTATGCCTCTGGACTTGGTGTTAATTCGAGTCAGGCAAAGGCTCTTGTGTATTATACTTTTGGAGCTCTTGGAGGTAACCTAATAGCCCACATGGTTTTGGGCTACCGGTACTGGGCTGGCATTGGAGTCCTCCAGAGCTGTGAATCTGCACTGACCCATTATCGTCTTGTTGCCAATCATGTTGCTAGTGATATCTCGCTAACAGGTGGCTCAGTGGTGCAGAGAATACGACTGCCTGATGAAGTAGAAAACCCGGGAATGAACAGCGGGATGCTAGAAGAAGATCTGATTCAGTATTACCAGTTCCTAGCTGAAAAGGGCGATGTACAAGCGCAAGTTGGTCTTGGACAGCTGCATCTACACGGAGGGCGAGGAGTAGAACAGAATCACCAGAGAGCATTTGACTACTTCAATTTAGCAGCTAATGCTGGCAATTCACATGCGATGGCTTTCTTAGGAAAGATGTATTCAGAAGGAAGTGATATTGTACCTCAGAGTAATGAGACAGCTCTACACTACTTTAAAAAAGCTGCTGACATGGGCAACCCGGTTGGACAGAGTGGGCTTGGAATGGCCTACCTCTACGGGAGAGGAGTTCAAGTTAATTATGATCTGGCACTGAAGTATTTCCAGAAAGCTGCTGAACAAGGCTGGGTAGATGGACAACTACAGCTTGGTTCTATGTACTATAATGGTATTGGAGTCAAGAGAGATTACAAACAGGCCTTGAAGTATTTTAATTTAGCTTCTCAAGGAGGCCATATCTTGGCTTTCTATAACCTGGCACAGATGCATGCCAGCGGCACAGGTGTGATGCGGTCCTGCCACACTGCAGTGGAGTTGTTTAAGAATGTGTGTGAACGAGGCCGCTGGTCAGAGAGGCTGATGACTGCCTATAACAGCTATAAAGACGGTGGCTACAATGCTGCAGTGATCCAGTACCTCCTGCTGGCAGAACAAGGGTACGAAGTGGCACAGAGCAATGCAGCCTTCATTCTTGATCAGAAAGAAGCTACCATTGTTGATGAGAATGAAACTTATCCCAGAGCTTTACTACATTGGAACAGGGCCGCCTCTCAAGGCTATACTGTGGCTAGAATTAAGCTTGGAGACTACCATTTCTATGGATTTGGCACTGATGTAGATTACGAGACTGCATTCATTCATTATCGTCTTGCTTCTGAGCAACAGCACAGTGCACAAGCAATGTTTAACCTCGGATACATGCATGAGAAGGGCCTGGGCATTAAACAGGATATTCATCTTGCAAAACGCTTTTATGACATGGCAGCGGAAGCCAGCCCCGATGCACAAGTCCCAGTCTTCCTAGCACTCTGCAAATTGGGCGTTGTGTACTTCTTGCAGTACATCAGAGAAACAAATATCCGAGATATGTTCACTCAGCTTGACATGGACCAGCTTCTGGGGCCCGAGTGGGACCTTTACCTCATGACCATCATCGCTCTTCTCTTGGGGACGGTCATAGCCTACAGACAGAGGCAGCACCAGGACCTGCCTGTGCCCAGGCCTCCAGGGCCACGGCCAGCCCCGCCCCAGCAGGAGGGGCCACCCGAGCAGCAGCCACCCCAGTAA

Related Sequences

XP_004837157.1 Protein

Sel1l PREDICTED: protein sel-1 homolog 1 isoform X1 [Heterocephalus glaber]

Length: 793 aa      View alignments
>XP_004837157.1
MQVRVGLTLLLCAVLLGSASPSSDEEGNQDESLDSKTSLPSDESVKDHTTTGRVVAGQIFVDSEESELESPIQEEENSLKSQEGKSATEEISFLESPNPEKDYEAPKKVRKPALTAIEGTAHGEPCHFPFLFLDMEYVACTSDGREDGRLWCATTYDYGTDEKWGFCETEEEAARRRQMEEAEMLYQTGMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALLFGDYMTQNIQAAKEMFEKLTEDGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGGYNAAVIQYLLLAEQGYEVAQSNAAFILDQKEATIVDENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLGVVYFLQYIRETNIRDMFTQLDMDQLLGPEWDLYLMTIIALLLGTVIAYRQRQHQDLPVPRPPGPRPAPPQQEGPPEQQPPQ