Sequence details NCBI ID: XM_004837071.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttc7b
Gene Name tetratricopeptide repeat domain 7B, transcript variant X3
Entrez Gene ID 101712902

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC7B ENSCPOG00000002436 (Guinea pig)

Gene Details

tetratricopeptide repeat domain 7B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002218, Guinea pig)

Protein Percentage 99.13%
CDS Percentage 96.25%
Ka/Ks Ratio 0.03265 (Ka = 0.0042, Ks = 0.1296)

TTC7B ENSG00000165914 (Human)

Gene Details

tetratricopeptide repeat domain 7B

External Links

Gene Match (Ensembl Protein ID: ENSP00000336127, Human)

Protein Percentage 98.0%
CDS Percentage 92.01%
Ka/Ks Ratio 0.02871 (Ka = 0.0095, Ks = 0.3311)

Ttc7b ENSMUSG00000033530 (Mouse)

Gene Details

tetratricopeptide repeat domain 7B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052107, Mouse)

Protein Percentage 96.75%
CDS Percentage 89.51%
Ka/Ks Ratio 0.03835 (Ka = 0.017, Ks = 0.4427)

Ttc7b ENSRNOG00000027300 (Rat)

Gene Details

tetratricopeptide repeat protein 7B

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036097, Rat)

Protein Percentage 95.55%
CDS Percentage 89.1%
Ka/Ks Ratio 0.06181 (Ka = 0.0275, Ks = 0.4444)

Genome Location

Sequence Coding sequence

Length: 2457 bp    Location: 11698636..11935122   Strand: +
Raw sequence   
>XM_004837071.1
ATGGCAGAACTTCTCCTCGGGGAGTCGAAGCTGGAGCAGTACCTGAAGGAGCACCCCCTGAGGCAGGGTGCCAGTCCCCGAGGCCCCAGGCCCCAGCTGACTGAGGTCCGCAAACATCTGACTGCCACCCTGGACCGAGGGAATCTCAAGTCAGAATTCCTACAAGAATCCAATCTGATCATGGCCAAGTTGAATTATGTGGAAGGAGATTATAAAGAAGCTCTGAACATTTATGCCCGGGTGGGCCTCGATGACCTGCCCCTGATGGCCATCTCTCCGTACAGGTTGCGCATGATTGCAGAAGCCTATGCTACCAAAGGACTTTGTTTAGAGAAGCTGCCTATTTCATCTTCTACCAGTAATCTTCATGTCGACCGGGAACAGGATGTCATCACCTGTTATGAGAAAGCTGGGGACATCGCACTCTTGTATCTCCAAGAGATAGAAAGGGTAATCCTTACTAATATTCAGAACAGAAGCCCTAAGCCTGGCCCTGCTCCCCACGATCAAGAACTAGGTTTTTTCCTAGAAACAGGACTTCAGAGAGCCCATGTCCTCTATTTCAAAAATGGGAACTTGACAAGAGGAGTTGGAAGATTCAGAGAGATTCTCAGAGCGGTGGAAACGAGAACAACACAAAACTTGCGAATGACAATCGCCAGGCAGTTGGCGGAGATCTTGTTGCGGGGTATGTGTGAGCAGAGCTACTGGAACCCCCTGGAGGATCCTCCATGCCAGTCCCCTCTGGATGATCCTCTCCGGAAAGGAGCAAACACCAAAACCTACACCCTCACTCGCAAAGCCCGCGTCTACTCAGGAGAGAACATTTTTTGTCCTCAAGAAAATACTGAAGAGGCCCTGTTGTTACTGCTGATTAGTGAATCAATGGCCAACCGGGACGCTGTGCTGAGCAGGATACCTGAGCACAAAACTGACCGCCTCATCAGTCTGCAGAGCGCATCTGTGGTCTACGATTTGCTGACCATTGCTCTTGGGAGAAGAGGCCAGTATGAGATGCTGTCGGAGTGCTTAGAAAGAGCCATGAAGTTCGCCTTTGAGGAGTTCCACTTATGGTACCAGTTCGCTCTCTCACTGATGGCTGCTGGAAAATCTGCTCGAGCTGTGAAGGTGCTGAAAGAGTGCATCCGTCTGAAGCCCGACGACGCAACCATCCCGCTCCTTGCTGCCAAGCTGTGCATGGGCTCCCTGCACTGGTTGGAAGAGGCTGAGAAGTTTGCCAAAACTGTTGTTGATGTGGGAGAAAAAACGTCAGAGTTCAAGGCCAAAGGCTACTTAGCTCTCGGGCTCACATACAGTCTGCAGGCCACTGACGCTTCTTTGCGAGGGATGCAGGAGGTCCTGCAGAGGAAGGCTCTTCTCGCATTTCAGAGGGCCCACAGCCTGTCACCTACAGATCACCAAGCAGCTTTCTACCTGGCTCTTCAGCTTGCAATCTCCAGACAGATACCAGAGGCCCTAGGCTACGTCCGCCAAGCTCTTCAGCTTCAAGGTGACGACGCCAATTCCCTGCACCTCCTTGCCCTCTTACTGTCTGCACAAAAGCACTACCATGACGCTCTCAACATCATTGACATGGCCCTGAGCGAATATCCAGAAAACTTTATATTACTATTTTCCAAAGTGAAGATGGAGTCCCTCTGCCGGGGCCCAGATGAGGCACTGCTCACCTGTAAGCACATGTTACAAATATGGAAATCCTGCTACAACCTAACCAATCCCAGTGACTCTGGACGTGGGAGCAGCCTCTTAGATAGAACCATTGCTGACAGACGCCAGCTTAACACAATCACTTTGCCAGACTTCAGCGATCCTGAGACAGGCAACTCTCCAGAAGCATACTTTCATGGTTTTCCTTCCCTTTTTTCAGTTAGCTCTGTCCACGCCACATCTGTGGCAGCCTCAAGAGTGGAGCAAGCACTGTCAGAAGTGGCCTCATCTCTGCAGAGCAGTGCCCCCAAGCAGGGCCCACTACACCCCTGGATGACTCTGGCACAGATCTGGCTCCATGCAGCTGAGGTCTACATTGGCATTGGGAAACCCGCAGAAGCCACAGCCTGTACTCAAGAAGCTGCCAACCTCTTCCCGATGTCCCACAACGTCCTGTACATGAGGGGCCAGGTGGCTGAGCTCCGAGGAAACATGGACGAGGCCCGGCGGTGGTATGAGGAGGCCCTGTCCATCAGTCCCACCCATGTGAAGAGCATGCAGCGCCTGGCCCTGATCCTTCACCAGCTGGGCCGCTACAGCCTGGCAGAGAAGATCCTCCGCGATGCAGTGCAGGTGAACTCCACAGCTCATGAGGTCTGGAACGGGCTGGGCGAGGTCCTCCAAGCCCAGGGCAACGATGTGGCGGCCACCGAGTGCTTCCTGACGGCCTTGGAGCTGGAGGCCAGCAGCCCCGCCGTGCCCTTCACCATCATCCCCCGAGTGCTCTGA

Related Sequences

XP_004837128.1 Protein

Ttc7b PREDICTED: tetratricopeptide repeat protein 7B isoform X3 [Heterocephalus glaber]

Length: 818 aa      View alignments
>XP_004837128.1
MAELLLGESKLEQYLKEHPLRQGASPRGPRPQLTEVRKHLTATLDRGNLKSEFLQESNLIMAKLNYVEGDYKEALNIYARVGLDDLPLMAISPYRLRMIAEAYATKGLCLEKLPISSSTSNLHVDREQDVITCYEKAGDIALLYLQEIERVILTNIQNRSPKPGPAPHDQELGFFLETGLQRAHVLYFKNGNLTRGVGRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWNPLEDPPCQSPLDDPLRKGANTKTYTLTRKARVYSGENIFCPQENTEEALLLLLISESMANRDAVLSRIPEHKTDRLISLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQFALSLMAAGKSARAVKVLKECIRLKPDDATIPLLAAKLCMGSLHWLEEAEKFAKTVVDVGEKTSEFKAKGYLALGLTYSLQATDASLRGMQEVLQRKALLAFQRAHSLSPTDHQAAFYLALQLAISRQIPEALGYVRQALQLQGDDANSLHLLALLLSAQKHYHDALNIIDMALSEYPENFILLFSKVKMESLCRGPDEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRTIADRRQLNTITLPDFSDPETGNSPEAYFHGFPSLFSVSSVHATSVAASRVEQALSEVASSLQSSAPKQGPLHPWMTLAQIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQVAELRGNMDEARRWYEEALSISPTHVKSMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDVAATECFLTALELEASSPAVPFTIIPRVL