Sequence details NCBI ID: XM_004837063.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc88c
Gene Name coiled-coil domain containing 88C
Entrez Gene ID 101711088

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC88C ENSCPOG00000009579 (Guinea pig)

Gene Details

coiled-coil domain containing 88C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008595, Guinea pig)

Protein Percentage 91.37%
CDS Percentage 91.42%
Ka/Ks Ratio 0.11746 (Ka = 0.0409, Ks = 0.3486)

CCDC88C ENSG00000015133 (Human)

Gene Details

coiled-coil domain containing 88C

External Links

Gene Match (Ensembl Protein ID: ENSP00000374507, Human)

Protein Percentage 86.51%
CDS Percentage 86.66%
Ka/Ks Ratio 0.10374 (Ka = 0.0692, Ks = 0.667)

Ccdc88c ENSMUSG00000021182 (Mouse)

Gene Details

coiled-coil domain containing 88C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068629, Mouse)

Protein Percentage 83.31%
CDS Percentage 83.89%
Ka/Ks Ratio 0.09536 (Ka = 0.0876, Ks = 0.9191)

Ccdc88c ENSRNOG00000004482 (Rat)

Gene Details

Protein Ccdc88c

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005908, Rat)

Protein Percentage 84.55%
CDS Percentage 84.13%
Ka/Ks Ratio 0.09119 (Ka = 0.0824, Ks = 0.9031)

Genome Location

Sequence Coding sequence

Length: 6051 bp    Location: 11215357..11336413   Strand: +
Raw sequence   
>XM_004837063.1
ATGGACGTGACGGTCTCGGAGCTCATGGAGCTCTTTCTGCAGAGCCCGCTGGTGACCTGGGTGAAAACTTTTGGCTCCTTCGGAAGCGGCCACCAGGATAACTTGACTATGTACATGGATTTAGTGGATGGCATCTTTTTGAACCAAATTATGCTGCAAATAGATCCCAGGCCGACCAACCAGCGCATCAATAAGCACGTCAACAATGATGTGAACCTTCGTATTCAGAACCTGACCGTCCTGGTGCGGAACATTAAGACTTACTATCAGGAAGTTCTCCAGCAGCTGATCGTAATGAATTTGCCCAATGTTTTGATGATTGGCAAAGACCCACTGTCTGGGAAGAGCATGGAGGAGATTAAGAAAGTGCTGCTGCTGGTGCTGGGTTGTGCTGTCCAGTGTGAGAAGAAAGAGGAGTTCATTGAAAGAATCAAACAGCTGGACATTGAGACCCAGGCTGGCATCGTGGCTCACATCCAGGAGGTGACCCACAACCAGGAGAACGTGTTCGACCTGCAGTGGCTGGAGCTGCCGGACGTGGCCCCGGAGGAGCTGGAGGCCCTGTCCAGGAGCATGGTGTTCCACCTCCGCAGGCTCATTGATGAGCGCGACGAGTGCACCGAGCTGATCGTCGACTTGACGCAGGAGCGGGACTACCTGCAGGCACAGCACCCGCCCAGCCCTGTCAGGTCGTCCAGCGCAGACTCCACGCCCAGCCCCACCAGCAGCCTCTCCAGCGAGGACAAGCAGCACCTGGCGGTGGAGCTGGCCGACACCAAGGCCAGGCTTCGGCGTGTCAGGCAGGACCTGGAGGAGAAGACAGAGCAGCTCGTGGATACCAGGCACGAGGTGGACCAGCTGGTGCTGGAGCTGCAGAAGGTCAAGCAGGAGAACATACAGCTGGCGGCCGATGCCCGGTCTGCCCGTGCCTACCGGGATGAGCTGGACTCCCTGCGGGAGAAGGCAAACCGTGTGGAGAGGCTGGAGATGGAGCTGGTTCGCTGCAAGGAGAAGCTGCACGATGTGGACTTCTACAAGGCCCGCATGGAGGAGCTGAGAGAAGACAACATTATCTTAATTGAAACCAAGGCCATGCTGGAGGAGCAGCTGACCGCTGCCCGGACACGCGGTGATAAAGTCCACGAGCTGGAGAAGGAGAACCTGCAGCTGAAATCCAAGCTGCACGACCTGGAATTGGACCGAGACACAGATAAGAAGCGAATAGAGGAGCTGCTGGAAGAAAACATGGTCCTGGAGATTGCCCAGAAGCAGAGCATGAATGAGTCGGCCCACCTGGGTTGGGAGCTGGAGCAGCTGTCTAAGAATGCAGAGCTTTCAGATGCCTCCAGGAAGTCATTTGTGTTTGAGCTGAATGAATGTGCCTCCAGCCGCATCCTGAAGCTGGAGAAGGAGAACCAGAGCCTCCAGAGCACCATCCAGGGCCTGCGAGATGCATCCTTGGCGCTGGAGGAGAGCAGCCTCAAATGTGGGGAGCTGGAGAAGGAGAACCATCAGCTCAGCAAGAAGATTGAAAAGTTACAGACCCAGCTGGAGAGAGAGAAGCAGAGCAGCCAAGACCTGGAGACCCTCAGTGAGGAGCTGATCCGGGAGAAGGAACAGCTGCAGAGTGACATGGAGGCCCTGAAGGCCAACAAGGCCAGGCAGATCAAGGATCTGGAGCAGGAGAAGGACTACCTGCACCGAACTGTGTGGTCGCTGCAGGAGAGGTCGCAGGCCAGCAGCGAGGCCCGAGGGAGGGACATTGAGAAGGAGAACAGGGCCCTCCACCAGGCGGTGACAGAGGCTGGCAGCAAACTGAGCCAGCTTGAGTTGGATAAGAAGCAACTGCACAGGGACTTGGAGCAGGCCAAGGAAAAGGGGGAGCAGGCGGATGCATTGGAGAAGGAGCTGCGCCGGCTAGAGAAGGAGAATGAGCAGCTGGCCAGGAAGGTGACCTCCCTGAAGATGGTCACTGAGAAGGTCGAGGCCCTGGAGCATGAAAGCCGGGGCCTGGAGCTGGAGAACCGGACTCTGAAGAAGTCCCTGGACACCCTACAGAACGTGTCAGTGCAGCTCGAGGGCCTGGAGCGAGACAACAAGCAGCTGGACCAGGAGAACCTGGAGCTGCGGAAGATGGTGGAGACCATGCGCTTCACCAGCGCCAAAATGGCACAGATAGAGAGGGAGAACCAGCAGCTGGAGCTCGAGAAGGAGGAGCTGCGGAAGAACGTGGACCTGCTGAAGGCGCTGAGCAAGAAGTCGGAGCGCCTGGAGCTCAGCTACCAGAGCGTGAGCGCCGAGAACCTCCGGCTGCAGCAGAGCTTAGAGACCAGCAGCCACAAATCGGAGACCCTAGAGCAGGAGCTGAGCGAGCTGGAGACCGAACACCAGGCACTGCGGCGAGACTTGGAGGCCCTTCGGCTCACCAATAAGCAGCTGGAGAGGGCTGAGAAGGACAGAAAGGCTCTGGAGCAGGAGGTGGCCCAGTTGGAGAAGGACAAGAAGCTGCTGGAGAAGGAGGCCAAGCGTCTGTGGCAGCAGGTGGAGCTGAAGGAGGCCGTCTTGGACGACAGCACCGCCAAGCTGTCAGCGGCCGAGAAGGAGAGCCGCGTGCTGGACAAGGAGCTGGCCCGCTGCCGGGATGCAGCCAGCAAGCTGAAGGAGCTGGAGAAGGACAACAGGGACCTCACCAAGCAGGTCACCATGCACACAAGGACGCTGACCACCCTGAGAGAGGACCTGGTGCTGGAGAAGTTGAAGAGCCAGCAGCTGACTGGTGAGCTGGACAGACTGGGCCAGGAGCTGGAGAAGGTTGGGCTCAGCAAGGAGCTGCTGCTGCAGGACGAAAACAGCCACGGTGACACAAAATACAAGATTTTGGAAGGCAGAAATGAGTCAACATTAAGAACAGCACTGACCATGAAAGAAGAAAAGATTATGTTCTTGGAAGCCCAGGTGGAAGAGAAAGTAGGCCTGAACCAGCAGTTACAGAGCGAGCTCCAGATGGTGAAGGATGAGCGGGACCGGCTCAGGCAGACCCAGGAAGAAGCAACGCATGTGCAGAACTCGTTCAAGTGCCCTCTGGGCACATCAGTCCCCAGTCCCCAGGAAAAGGAAGCCTGGGGACCTGGCCACAAGGAAGCCACCATGGAGCTGCTCCGTGTGAAGGACCGGGCCATTGAGCTGGAGCGGAATAACGCAGCTCTGCAGGCCGAGAAGCAGCTGCTGAAGGAGCAGCTGCAGCACCTGGAGACGCAGAACATGGCCTTCAGTAGTCAGATCCTGACGCTGCAGAAGCAGAGTGCCTTCCTGCAGGAACACACCACCATGCTGCAGACCCAGACCGCCAAGTTGCAGGTGGAGAATTCCACGCTGAGTTCCCAGAGTGCTTCGCTGGCCGCACAGTACACACTGCTGCAGAGCCAACACACAGCCAAGGAGACAGAGCACGAGGGCCTGCAGAGGCAGCAGGAGCAGTTGGCGGCCGCCTACGAGGCCTTGCTCCAGGACCACGAGCACCTGAGCTCACTGCATGAGCACCAGTCCTCAGAGTACGAGGCCCTCATCCGCCAGCACAGCTGCCTGAAGACACTGCACCGGAACCTGGATCTGGAGCACAAGGAGCTCAGAGAGAGGCACGGCGACATGCTGAAGCACAGGGAGGAGTTGGACCAGCTGGAGAAGGTCCTGACTGCCGAGCGGGAGGCGCTGCAGCAGGAGCAGAGGACGCACGCTGTCACTACGGATGAGAACCGGAGGCTGCGGGCAGAGCTGGACAGGGTCAATTTCCTGCATCAGCAGCTGAAGGGGGAATGTGAAGAGCTGCATGCCCACACCAAGGAGCTGAAAACCTCACTGAACACGTCGCAGCTGGAGCTGAACCGCTGGCAGGCCCGCTTCGATGAGCTGAAGGAGCAGCACCAGACCATGGACATCTCGCTGACCAAGCTGGACAACCACTGCGAGCTGCTCTCCCGCCTAAAGGGGAACTTGGAGGAGGAGAACCATCACCTCCTGAGCCAGATCCAGCTGCTGAGCCAGCAGAACCAGATGCTCCTAGAACAGAACCTGGAGAACAAGGAGCAGTACCATGAGGAGCAGAAGCAGTACATAGACAAATTAAATGCCTTACGGAGACATAAGGAAAAACTGGAAGAGAAAATCATGGATCAGTACAAGTTCTATGATCCTGCTCCAAAGAAGAAGAACCACTGGATTGGAGCCAGAGCCTTAGTGAAATTCATTAAGCCAAAGAAAGAGGGTTCCAGAGAACGACTGAAGTCAACTGCAGACAGCCCGCCCTGGCAATCTGAGTCCTCAGACCCGGCCTCGCCATCAGCTGCTCAGCCTCTCAGATCACAGCCAGAGAACCCCAGCAGTGCCCCTCTGGGCTCAAACTGTGCTGAAGAGCGTGATGCTCACAATGGGCCTGTGGGGAAAGGCCCTGGGGATCTAAAACCAAAGCGAGGGTCCCCACACGGAGGCGGCCTGGACCGCACAGATGCCTCCACCAACCCAGCCACGAAGTCCTGGCCCTCAGAGCTGGGCTCCCAGACCTGCTCGGCCTCGGTGATCACAGCAGCCCCCTCCAGTTCCACCCCTGCCCCCCGGCTCCCAGGTCGCCCCAAAGGCTACAGTTCAGACGACAACCTCTGTGAGGCGTCCCTGGAGCTCGAGGGCACCCCGCACAGGCAGCATGTGTCTCGTCCAAGCAGCTTGGAGAGCAGCAGAAACACATCTAGCAACAGCTCACCTCTGAGCCTCAAAGGTTCCTCCGACCAGCTCTACGGCCGCTCCGAGAGCTTCAGCAGTGAAGATCTGATCCCTAGCAGGGACCCCAGCACCCTGGGACACGGTGCCCTCAGCTGCCATGAGTACCCCCTGCCCCGGAATCGGCCTCTCCCCCAGGAGGCTTCCCAGAAAAGGGGCGTGGCCACAGCCCACCCTGGGGTGCGGCCCTGTTCAGCCTCCCCCAGCAGTGAGATGGTCACCTTGGAGGAGTTCCTGGAGGAGAGTAACCGCAGCTCCCCAACCCACGACACTCCCAGCTGTCGGGATGACCTGCTAAGTGACTACTTCCGAAAGGCCAATGATTCCCCGGCCATTGGAGGCCCACCAGGACCTCCTGCCAGGAAGGAGGGAGCCAAGATGCCCACCAGCTTTGTGGCCCCCACCGTGAAGATGGCCATCAGCACCTCCGAGGGGAGGCAGCTGAAGCCTGGGCATTATGTGAAGCCGAACTTCAGACCGACAGAAGCAGAGGTCCCAGTGGGTCCCCCTGCAAGACAGGCCCAGCCTCCCCAGAGCCTGTCTCTGGGCAGACCCCGGCAAGCCACAATGACCCCTGCTTCCCACACCCCTGCCAGTCGGAGTGCATCCCTGAGCCGTGCCTACAGCCTGGCCTCTGCCGACCTTCTCCGGGCCAGCGGGCCAGAAGCCTGCAGACAACAGTCCCCTCAGAAACTGGGGGGTCCTGAGGCCTTGGGGAGCAGAGAGACAGGCAGCCACGCCCTGCAGAGCCCTGTACCTCCCAGCTCTCATAGCCTGGTACGGGAGCGGACCCCACTGGTGGGCAAGGCTGATGGCTCCTGCGCAGGCCCTGGCCCCCGAAACCGGCCACCAGACACCAGGCGCTTCTCACTGGCTCCCCCGAAGGAGGAGAGGCTGGCACCCCTGCAGCAGTCCGCCACGGTCCCCGCCATTGCCACCACCACAGGCAGCAGTGGCAGTAGCTCCCAGCTCCAGCACTTCTCATCTGCTGCAGCCCCTGCCACCAGGACCAAGCCCAAAGTGCTCCCCCATTCAGGGGAGGTAGCCACCGTGGCCCCGGTCCGGGTGGGGCTCAGCATCTCAGAGGGAGACAAGAACCTGGGTCAGGGCCACTCTGAGGGCCTCCTGGCCAAGAGCCCTGGTAGGTCACCTGACTCAGCTCCCCATGCCAGCCGGGGCCCTGAGGACTTCAGCCGTGGGGGCAGCTCAAAGAGCACCCCAGCATCCCCGGAGCCAGGCGGGGACCAGCAGACAGTGTGGTACGAGTATGGCTGCGTGTGA

Related Sequences

XP_004837120.1 Protein

Ccdc88c PREDICTED: protein Daple [Heterocephalus glaber]

Length: 2016 aa      View alignments
>XP_004837120.1
MDVTVSELMELFLQSPLVTWVKTFGSFGSGHQDNLTMYMDLVDGIFLNQIMLQIDPRPTNQRINKHVNNDVNLRIQNLTVLVRNIKTYYQEVLQQLIVMNLPNVLMIGKDPLSGKSMEEIKKVLLLVLGCAVQCEKKEEFIERIKQLDIETQAGIVAHIQEVTHNQENVFDLQWLELPDVAPEELEALSRSMVFHLRRLIDERDECTELIVDLTQERDYLQAQHPPSPVRSSSADSTPSPTSSLSSEDKQHLAVELADTKARLRRVRQDLEEKTEQLVDTRHEVDQLVLELQKVKQENIQLAADARSARAYRDELDSLREKANRVERLEMELVRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLTAARTRGDKVHELEKENLQLKSKLHDLELDRDTDKKRIEELLEENMVLEIAQKQSMNESAHLGWELEQLSKNAELSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDASLALEESSLKCGELEKENHQLSKKIEKLQTQLEREKQSSQDLETLSEELIREKEQLQSDMEALKANKARQIKDLEQEKDYLHRTVWSLQERSQASSEARGRDIEKENRALHQAVTEAGSKLSQLELDKKQLHRDLEQAKEKGEQADALEKELRRLEKENEQLARKVTSLKMVTEKVEALEHESRGLELENRTLKKSLDTLQNVSVQLEGLERDNKQLDQENLELRKMVETMRFTSAKMAQIERENQQLELEKEELRKNVDLLKALSKKSERLELSYQSVSAENLRLQQSLETSSHKSETLEQELSELETEHQALRRDLEALRLTNKQLERAEKDRKALEQEVAQLEKDKKLLEKEAKRLWQQVELKEAVLDDSTAKLSAAEKESRVLDKELARCRDAASKLKELEKDNRDLTKQVTMHTRTLTTLREDLVLEKLKSQQLTGELDRLGQELEKVGLSKELLLQDENSHGDTKYKILEGRNESTLRTALTMKEEKIMFLEAQVEEKVGLNQQLQSELQMVKDERDRLRQTQEEATHVQNSFKCPLGTSVPSPQEKEAWGPGHKEATMELLRVKDRAIELERNNAALQAEKQLLKEQLQHLETQNMAFSSQILTLQKQSAFLQEHTTMLQTQTAKLQVENSTLSSQSASLAAQYTLLQSQHTAKETEHEGLQRQQEQLAAAYEALLQDHEHLSSLHEHQSSEYEALIRQHSCLKTLHRNLDLEHKELRERHGDMLKHREELDQLEKVLTAEREALQQEQRTHAVTTDENRRLRAELDRVNFLHQQLKGECEELHAHTKELKTSLNTSQLELNRWQARFDELKEQHQTMDISLTKLDNHCELLSRLKGNLEEENHHLLSQIQLLSQQNQMLLEQNLENKEQYHEEQKQYIDKLNALRRHKEKLEEKIMDQYKFYDPAPKKKNHWIGARALVKFIKPKKEGSRERLKSTADSPPWQSESSDPASPSAAQPLRSQPENPSSAPLGSNCAEERDAHNGPVGKGPGDLKPKRGSPHGGGLDRTDASTNPATKSWPSELGSQTCSASVITAAPSSSTPAPRLPGRPKGYSSDDNLCEASLELEGTPHRQHVSRPSSLESSRNTSSNSSPLSLKGSSDQLYGRSESFSSEDLIPSRDPSTLGHGALSCHEYPLPRNRPLPQEASQKRGVATAHPGVRPCSASPSSEMVTLEEFLEESNRSSPTHDTPSCRDDLLSDYFRKANDSPAIGGPPGPPARKEGAKMPTSFVAPTVKMAISTSEGRQLKPGHYVKPNFRPTEAEVPVGPPARQAQPPQSLSLGRPRQATMTPASHTPASRSASLSRAYSLASADLLRASGPEACRQQSPQKLGGPEALGSRETGSHALQSPVPPSSHSLVRERTPLVGKADGSCAGPGPRNRPPDTRRFSLAPPKEERLAPLQQSATVPAIATTTGSSGSSSQLQHFSSAAAPATRTKPKVLPHSGEVATVAPVRVGLSISEGDKNLGQGHSEGLLAKSPGRSPDSAPHASRGPEDFSRGGSSKSTPASPEPGGDQQTVWYEYGCV