Sequence details NCBI ID: XM_004837062.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Smek1
Gene Name SMEK homolog 1, suppressor of mek1 (Dictyostelium), transcript variant X2
Entrez Gene ID 101710488

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMEK1 ENSCPOG00000003794 (Guinea pig)

Gene Details

SMEK homolog 1, suppressor of mek1 (Dictyostelium)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003425, Guinea pig)

Protein Percentage 94.95%
CDS Percentage 92.85%
Ka/Ks Ratio 0.14803 (Ka = 0.0339, Ks = 0.2292)

SMEK1 ENSG00000100796 (Human)

Gene Details

SMEK homolog 1, suppressor of mek1 (Dictyostelium)

External Links

Gene Match (Ensembl Protein ID: ENSP00000450864, Human)

Protein Percentage 99.15%
CDS Percentage 94.72%
Ka/Ks Ratio 0.01788 (Ka = 0.0039, Ks = 0.2208)

Smek1 ENSMUSG00000041846 (Mouse)

Gene Details

SMEK homolog 1, suppressor of mek1 (Dictyostelium)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000129654, Mouse)

Protein Percentage 98.9%
CDS Percentage 92.97%
Ka/Ks Ratio 0.01617 (Ka = 0.0051, Ks = 0.3132)

Smek1 ENSRNOG00000027773 (Rat)

Gene Details

SMEK homolog 1, suppressor of mek1 isoform 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000038439, Rat)

Protein Percentage 97.92%
CDS Percentage 91.36%
Ka/Ks Ratio 0.03149 (Ka = 0.012, Ks = 0.3807)

Genome Location

Sequence Coding sequence

Length: 2463 bp    Location: 11160270..11197264   Strand: +
Raw sequence   
>XM_004837062.1
ATGACCGATACCCGGCGGCGGGTGAAGGTCTACACGCTCAACGAGGACCGGCAGTGGGACGATCGGGGCACCGGGCATGTGTCGTCCGGCTACGTGGAACGCCTGAAGGGCATGTCCCTGCTTGTCAGGGCCGAGAGCGACGGTTCTCTACTCTTAGAATCTAAAATCAATCCTAACACTGCATACCAGAAGCAACAGGACACTCTGATTGTATGGTCTGAAGCAGAGAATTATGACTTGGCCCTTAGCTTTCAAGAAAAAGCTGGATGTGATGAGATTTGGGAGAAAATATGTCAGGTTCAAGGAAAGGATCCTTCAGTGGACATCACTCAGGACCTTGTGGATGAATCTGAAGAGGAAAGGTTTGATGATATGTCATCACCAGGTTTAGAATTGCCATCTTGTGAATTAAGTCGCCTCGAGGAAATTGCTGAACTTGTGGCATCATCTTTACCTTCCCCCCTCCGTCGAGAGAAACTTGCACTAGCACTGGAAAATGAGGGTTATATTAAAAAGCTCTTAGAGCTTTTTCATGTGTGTGAGGACTTGGAAAATATCGAAGGACTGCACCACTTGTATGAAATTATCAAAGGCATCTTTCTCCTAAACCGAACTGCTCTTTTTGAGGTTATGTTCTCTGAGGAATGCATAATGGACGTCATTGGATGTTTAGAATATGATCCTGCTTTATCACAACCACGAAAACACAGGGAGTTTCTAACAAAAACAGCCAAGTTTAAAGAAGTGATTCCCATATCAGATCCTGAGCTGAAACAAAAAATTCATCAGACGTACAGAGTTCAGTATATACAAGACATGGTTCTCCCTACCCCTTCAGTCTTTGAAGAAAATATGTTATCAACACTTCACTCTTTTATCTTTTTCAATAAGGTAGAAATTGTTGGTATGTTACAGGAAGATGAAAAATTTCTGACAGATTTGTTTGCACAACTAACAGATGAAGCAACAGATGAGGAAAAAAGACAGGAATTGGTTAACTTTTTGAAAGAATTTTGTGCATTTTCCCAAACGCTACAACCTCAAAACAGAGACGCTTTTTTCAAGACTTTGTCAAATATGGGCATATTACCAGCTTTAGAAGTCATCCTTGGCATGGATGATACACAGGTGCGAAGTGCTGCTACTGATATATTCTCATACTTGGTTGAATATAATCCATCCATGGTACGAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGATATTTTACTCATCAACCTTATTATCGAACACATGATTTGTGATACAGATCCTGAACTTGGAGGGGCAGTCCAACTTATGGGCCTGCTTCGAACTTTAGTTGACCCAGAGAACATGTTAGCCACTGCCAACAAAACAGAAAAGACTGAATTTCTGGGTTTCTTCTACAAGCACTGTATGCATGTTCTTACTGCTCCCTTACTAGCAAATACTACAGAAGACAAGCCTAGTAAAGATGACTTTCAGACTGCGCAGTTATTGGCACTTGTGTTGGAACTGTTAACGTTTTGTGTGGAGCACCATACCTACCACATAAAGAACTACATTATCAACAAGGATATCCTCCGAAGAGTGCTAGTTCTTATGGCCTCGAAGCATGCTTTCTTGGCATTGTGTGCCCTTCGTTTTAAGAGAAAGATTATTGGATTAAAAGATGAGTTTTATAACCGCTACATAATGAAAAGTTTTTTGTTTGAACCTGTAGTCAAAGCGTTTCTCAACAATGGATCCCGCTACAATCTGATGAACTCTGCCATAATAGAAATGTTTGAATTTATTAGAGTGGAAGATATTAAATCATTAACTGCTCACGTAATTGAAAACTATTGGAAAGCACTGGAAGATGTAGATTATGTACAGACATTTAAGGGATTAAAACTGAGATTCGAACAACAAAGAGAAAGGCAAGATAACCCCAAACTTGACAGCATGCGTTCCATTTTGAGGAATCATAGATATCGACGAGATGCCAGAACACTAGAAGATGAAGAAGAGATGTGGTTTAACACAGATGAGGATGACATGGAAGATGGGGAACCTGTAGTATCTCCATCTGACAAAACTAAAAATGATGATGATATTATGGATCCAATAAGCAAATTCATGGAAAGGAAGAAATTGAAAGAAAGTGAGGAAAAGGAGGTGCTTTTGAAAACAAATCTTTCTGGACGGCAGAGTCCAAGTTTCAAGCTTTCCTTGTCCAGTGGAACAAAGACTAACCTCACCAGCCAGTCACCTACAGCAAACCTGCCTGGTTCTCCGGGATCCCCCGGATCCCCCGGGTCTCCAGGCTCTCCTGGATCTGTCCCTAAGAGCACATCTCAGACGGCAGCTATTACTACAAAGGGAGGTCTCGTGGGTCTGGTAGATTATCCTGATGATGATGAAGATGATGATGAAGATGAAGACAAAGAAGAGACGCCACCATTGTCAAAGAAAGCAAAATTTGAGTCATAA

Related Sequences

XP_004837119.1 Protein

Smek1 PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X2 [Heterocephalus glaber]

Length: 820 aa      View alignments
>XP_004837119.1
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGMSLLVRAESDGSLLLESKINPNTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQDLVDESEEERFDDMSSPGLELPSCELSRLEEIAELVASSLPSPLRREKLALALENEGYIKKLLELFHVCEDLENIEGLHHLYEIIKGIFLLNRTALFEVMFSEECIMDVIGCLEYDPALSQPRKHREFLTKTAKFKEVIPISDPELKQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEIVGMLQEDEKFLTDLFAQLTDEATDEEKRQELVNFLKEFCAFSQTLQPQNRDAFFKTLSNMGILPALEVILGMDDTQVRSAATDIFSYLVEYNPSMVREFVMQEAQQNDDDILLINLIIEHMICDTDPELGGAVQLMGLLRTLVDPENMLATANKTEKTEFLGFFYKHCMHVLTAPLLANTTEDKPSKDDFQTAQLLALVLELLTFCVEHHTYHIKNYIINKDILRRVLVLMASKHAFLALCALRFKRKIIGLKDEFYNRYIMKSFLFEPVVKAFLNNGSRYNLMNSAIIEMFEFIRVEDIKSLTAHVIENYWKALEDVDYVQTFKGLKLRFEQQRERQDNPKLDSMRSILRNHRYRRDARTLEDEEEMWFNTDEDDMEDGEPVVSPSDKTKNDDDIMDPISKFMERKKLKESEEKEVLLKTNLSGRQSPSFKLSLSSGTKTNLTSQSPTANLPGSPGSPGSPGSPGSPGSVPKSTSQTAAITTKGGLVGLVDYPDDDEDDDEDEDKEETPPLSKKAKFES