Details from NCBI annotation

Gene Symbol Chga
Gene Name chromogranin A (parathyroid secretory protein 1)
Entrez Gene ID 101700108

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHGA ENSCPOG00000014450 (Guinea pig)

Gene Details

chromogranin A (parathyroid secretory protein 1)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013016, Guinea pig)

Protein Percentage 75.93%
CDS Percentage 84.97%
Ka/Ks Ratio 0.38747 (Ka = 0.139, Ks = 0.3588)

CHGA ENSG00000100604 (Human)

Gene Details

chromogranin A (parathyroid secretory protein 1)

External Links

Gene Match (Ensembl Protein ID: ENSP00000216492, Human)

Protein Percentage 74.72%
CDS Percentage 83.07%
Ka/Ks Ratio 0.24231 (Ka = 0.1382, Ks = 0.5704)

Chga ENSMUSG00000021194 (Mouse)

Gene Details

chromogranin A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021610, Mouse)

Protein Percentage 68.71%
CDS Percentage 74.35%
Ka/Ks Ratio 0.16778 (Ka = 0.2174, Ks = 1.296)

Chga ENSRNOG00000007912 (Rat)

Gene Details

chromogranin A

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010592, Rat)

Protein Percentage 64.3%
CDS Percentage 70.69%
Ka/Ks Ratio 0.17566 (Ka = 0.2828, Ks = 1.6098)

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location: 9405147..9416764   Strand: +
>XM_004837031.1
ATGGCTCGCGGGCAGACCGACGGACCCGCGGACGCTCGCCCCCCGAGACGCTGCGCTCCCGCCCGCCGCCGGCCCAGCAGCCTCCCTCATGAGGCCGCCTTGCCGGTCCCCACGCCACCAGCTGGTCCGCGCCCGGGGTTCGCCAAACGCTCCGCCGCCGTCCTGGCGTTCCTGCTGTGCGCCGGGCAAGTCACTGCCCTCCCCGTGAACAGCCCTAGGACTAAAGGGGACATCGAGGTGATGAAGTGCATTGTCGAGGTTATCTCTGACTCGCTGTCCAAGCCCAGCCCCATGCCTGTCAGCCAGGAGTGTTTGGAGATCCTCCGAGGAGACGAACGGATCCTTTCTATCCTGCGACACCAGAATTTGCTGAGGGAGCTGCAAGACCTAGCTCTCCAAGGGACCAAGGAGAGGGCACAGCAGCAGAAAAAGCACAGCAGCTTCGAGGAGGAGCTCTCAGAGGTTGTGGGGAACCACAGCGACAAGGCCAAGCGGAAAGACGTGATGGAGGAAGCTTCCCCCAAGGATGCCATGGAGCGAGGAGGGGATGGTAAGGAGGAGAATGCTGAAGCCACAGAAGAAGCTAGGCCCCAGGCCCTCCCGGAACCTAGGCAGGGCTCTGTGACCTCAGGGAGCAAGCGGGCCCCCAGTGAGGAGGAGGAGGAGCAGGAGGCCCCCAACACCCAGCTGCCAGCCAGCCTCCCCAGCCAGGAACACCCAAGCCCTGCACAGAGTCTAGAGGACGGCCAGAAGGGCACAGGCGCAGAGCAAGGGCAGCCGGAAAAGAGGGAGAAAGAGGAGGAAAAGGAGGAAGACGAAGAGGCCGGAGACGCCGGAGAGAAGGCTGTGCCCGGGGGAGAAGACCCCACTGCAGTGCTGAACTCTCACCAGGATCTCAGTGACAAGGAGATCCAGAAAGGCGACAGTTGGTCCGAGGCCCTGGATGTCGATGGAGCTGGGAAGACTGGGACTGAGGAGGCTCGGCCCACCGAGGGGAAGGGAGAGCAGGAGCAGGAGGAGGAGGAGATGGCAGGGGTCCCCCAAGGCCCCTTCCGGGGTGGGAAGAGCAGGGAGCTGGAGCAGGAGGAGGAGCGGCTCTCCAGGGAGCGGGAGGACGCCGAGCGCTGGAGCAGGATGGATCAGCTGGCCAAAGAGCTGGCAGCCGAGAAGCGGCTGGAGGGGGAGGACCAGGAGGACGACCCTGACCGCTCCATGAAGCTCTCCTTCCAGGCCCCGGCCTATGACTTCCGGGGCTCTGGGCCGCAGCTTCGACGAGGCTGGAGGCCGTCTTCCCGGGAGGACAGCATCGAGGCTGGCCTGCCCCTCCAGGCCCATGGCTTCCGTGAGGAGAAGAAGGAGGAGGAGGGCAGTGCCAACCGCAGAGCAGAGGACCAAGAGCTGGAGAGCCTGTCAGCCATCGAGGCAGAGCTGGAGAAGGCGGCCCACCAGCTGCAGGCGCTGCGGAGGGGCTGA

Related Sequences

XP_004837088.1 Protein

Chga PREDICTED: chromogranin-A [Heterocephalus glaber]

Length: 490 aa      View alignments
>XP_004837088.1
MARGQTDGPADARPPRRCAPARRRPSSLPHEAALPVPTPPAGPRPGFAKRSAAVLAFLLCAGQVTALPVNSPRTKGDIEVMKCIVEVISDSLSKPSPMPVSQECLEILRGDERILSILRHQNLLRELQDLALQGTKERAQQQKKHSSFEEELSEVVGNHSDKAKRKDVMEEASPKDAMERGGDGKEENAEATEEARPQALPEPRQGSVTSGSKRAPSEEEEEQEAPNTQLPASLPSQEHPSPAQSLEDGQKGTGAEQGQPEKREKEEEKEEDEEAGDAGEKAVPGGEDPTAVLNSHQDLSDKEIQKGDSWSEALDVDGAGKTGTEEARPTEGKGEQEQEEEEMAGVPQGPFRGGKSRELEQEEERLSREREDAERWSRMDQLAKELAAEKRLEGEDQEDDPDRSMKLSFQAPAYDFRGSGPQLRRGWRPSSREDSIEAGLPLQAHGFREEKKEEEGSANRRAEDQELESLSAIEAELEKAAHQLQALRRG