Details from NCBI annotation

Gene Symbol Lgmn
Gene Name legumain, transcript variant X2
Entrez Gene ID 101698288

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LGMN ENSCPOG00000001216 (Guinea pig)

Gene Details

legumain

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001100, Guinea pig)

Protein Percentage 91.06%
CDS Percentage 91.21%
Ka/Ks Ratio 0.14332 (Ka = 0.0449, Ks = 0.3133)

LGMN ENSG00000100600 (Human)

Gene Details

legumain

External Links

Gene Match (Ensembl Protein ID: ENSP00000376911, Human)

Protein Percentage 81.76%
CDS Percentage 82.6%
Ka/Ks Ratio 0.14135 (Ka = 0.1025, Ks = 0.7253)

Lgmn ENSMUSG00000021190 (Mouse)

Gene Details

legumain

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021607, Mouse)

Protein Percentage 82.99%
CDS Percentage 82.76%
Ka/Ks Ratio 0.13927 (Ka = 0.1031, Ks = 0.74)

Lgmn ENSRNOG00000007089 (Rat)

Gene Details

legumain (Lgmn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010101, Rat)

Protein Percentage 80.92%
CDS Percentage 82.45%
Ka/Ks Ratio 0.15499 (Ka = 0.112, Ks = 0.7225)

Genome Location

Sequence Coding sequence

Length: 1311 bp    Location: 9239988..9207496   Strand: -
>XM_004837027.1
ATGCTGTGGAACGTAGCTGCGTTACTCAGCCTGGTCCTAGGCATTGGCGCTCTTCCCACCAGTGTGGATGACGACCCGGAGGACAGCGGCAAGCACTGGGTGGTGATTGTCGCAGGCTCCAACGGCTGGTATAATTACAGGCACCAGGCTGACGCGTGCCACGCCTACCAAATCATTCACGGCAATGGGATCCCGGACGAGCAGATTGTCGTGATGATGTATGATGACATTGCCCACTCTGAAGAAAACCCCACTCCAGGAATTGTGATCAACAGGCCTGGAGGCTCGGATGTGTACAAGGGAGTCCTTAAGGATTACACCGGAGAGGATGTGACCCCAGAAAACTTCCTTGCAGTGCTGAGAGGTGACAAAGAAGCAGTGAAGGGCAAAGGGTCTGGAAAAGTCCTGAAGAGTGGCCCCCAAGATCATGTGTTCATTTATTTCACCGACCATGGAGCACCTGGAATACTGGCTTTTCCTAATGATGATCTCCATGCCAAGGACCTGAACAGGACCATCCATTATATGCACAAGCACCACATGTACCAGAAGATGGTGTTCTACATTGAAGCCTGTGAGTCTGGCTCCATGATGAATCACCTGCCCCAGGACATCAACGTTTATGCAACTACTGCCGCCAACCCCAGCGAGTCATCCTATGCCTGCTACTATGACGAGCAGAGGTCCACGTACCTGGGTGACTGGTACAGCGTCAACTGGATGGAAGACTCTGATATGGAGGATCTGAGCAAGGAGACGCTCCACAAGCAGTACCAGCTGGTGAAGTCCCACACCAACACCAGTCACGTCATGCAGTACGGGAACAAGTCTATCTCTGCCATGAAAGTGATACAGTTTCAAGGAGTGAAGCACAAAGCCAGTGCCCCGATCTCTCTGCCTCCCGTCACACACCTTGACCTCACTCCGAGCCCAGAAGTGCCCCTGGAGATCATGAAAAGGAAACTGATGAGCACCAATGACTGGAAGAAGTCCCAGACTCTCATCAAGCAGATCCAGCAACATCTGGATGTTCGGCACCTCATTGAGAAGTCGGTGCACAAGATCATCTTCTTGCTGGCAGGGTCCGAGGCTGTGACAGACAGGCTTCTGTCTGAGAGAGCCCCTCTCACGGAGCACGACTGTTACGAGGGGGCTGTGACGCACTTCCGCACGCACTGCTTCAACTGGCACTCGTCCAGGTACGAATATGCCCTGAGACACCTGTATGTCCTGGTCAACCTGTGCGAGGAGAAGTATCCGATCGACAGGATAAAGTCGTCCATGGACAAGGTGTGCCTCGGTTACTACTGA

Related Sequences

XP_004837084.1 Protein

Lgmn PREDICTED: legumain isoform X2 [Heterocephalus glaber]

Length: 436 aa      View alignments
>XP_004837084.1
MLWNVAALLSLVLGIGALPTSVDDDPEDSGKHWVVIVAGSNGWYNYRHQADACHAYQIIHGNGIPDEQIVVMMYDDIAHSEENPTPGIVINRPGGSDVYKGVLKDYTGEDVTPENFLAVLRGDKEAVKGKGSGKVLKSGPQDHVFIYFTDHGAPGILAFPNDDLHAKDLNRTIHYMHKHHMYQKMVFYIEACESGSMMNHLPQDINVYATTAANPSESSYACYYDEQRSTYLGDWYSVNWMEDSDMEDLSKETLHKQYQLVKSHTNTSHVMQYGNKSISAMKVIQFQGVKHKASAPISLPPVTHLDLTPSPEVPLEIMKRKLMSTNDWKKSQTLIKQIQQHLDVRHLIEKSVHKIIFLLAGSEAVTDRLLSERAPLTEHDCYEGAVTHFRTHCFNWHSSRYEYALRHLYVLVNLCEEKYPIDRIKSSMDKVCLGYY