Sequence details NCBI ID: XM_004837022.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cpsf2
Gene Name cleavage and polyadenylation specific factor 2, 100kDa
Entrez Gene ID 101696793

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CPSF2 ENSCPOG00000010899 (Guinea pig)

Gene Details

cleavage and polyadenylation specific factor 2, 100kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009792, Guinea pig)

Protein Percentage 99.74%
CDS Percentage 94.25%
Ka/Ks Ratio 0.0045 (Ka = 0.0012, Ks = 0.2616)

CPSF2 ENSG00000165934 (Human)

Gene Details

cleavage and polyadenylation specific factor 2, 100kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000298875, Human)

Protein Percentage 99.49%
CDS Percentage 93.99%
Ka/Ks Ratio 0.00816 (Ka = 0.0023, Ks = 0.2848)

Cpsf2 ENSMUSG00000041781 (Mouse)

Gene Details

cleavage and polyadenylation specific factor 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047797, Mouse)

Protein Percentage 97.95%
CDS Percentage 89.73%
Ka/Ks Ratio 0.01936 (Ka = 0.01, Ks = 0.519)

Cpsf2 ENSRNOG00000005733 (Rat)

Gene Details

cleavage and polyadenylation specific factor 2, 100kDa (Cpsf2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008612, Rat)

Protein Percentage 98.34%
CDS Percentage 89.9%
Ka/Ks Ratio 0.01722 (Ka = 0.0085, Ks = 0.4911)

Genome Location

Sequence Coding sequence

Length: 2349 bp    Location: 8736876..8766599   Strand: +
Raw sequence   
>XM_004837022.1
ATGACATCTATTATTAAATTAACTACCCTGTCTGGGGTCCAAGAAGAGTCTGCCCTTTGCTATCTTCTGCAGGTTGATGAGTTTAGATTTTTATTGGACTGTGGCTGGGATGAGCACTTTTCTATGGATATTATAGATTCCCTGAGGAAGCATGTTCATCAGATTGATGCAGTGCTGCTGTCTCACCCTGACCCTCTCCATCTTGGTGCCCTCCCTTATGCTGTGGGAAAGCTGGGTCTGAACTGCGCTATCTATGCAACCATTCCTGTTTATAAAATGGGACAGATGTTCATGTATGATCTTTATCAGTCTCGACACAATACAGAAGATTTTACACTCTTTACGTTAGATGATGTGGATGCAGCCTTTGATAAAATACAGCAGCTAAAATTCTCTCAGATTGTGAATTTGAAAGGTAAAGGACATGGCTTGTCTATCACACCTCTGCCAGCTGGCCATATGATAGGCGGAACAATATGGAAAATTGTCAAAGATGGAGAAGAAGAAATTGTTTATGCAGTTGATTTCAACCACAAGAGGGAGATCCACTTGAATGGATGTTCCCTGGAAATGCTAAGCAGACCCTCTCTACTCATCACAGATTCATTTAATGCTACTTATGTGCAGCCTAGAAGGAAACAGAGAGATGAACAGCTACTGACAAATGTCCTGGAAACCCTTCGAGGTGATGGGAATGTATTGATAGCCGTGGATACTGCAGGCAGAGTTTTGGAACTTGCTCAGCTTCTTGATCAGATTTGGAGAACTAAAGATGCAGGATTGGGTGTTTACTCACTGGCACTCCTAAATAACGTCAGTTATAATGTGGTGGAGTTTTCTAAGTCCCAGGTAGAATGGATGAGTGATAAATTGATGAGATGTTTTGAAGACAAAAGAAATAACCCATTTCAGTTTCGCCATCTTTCTTTATGCCATGGTCTGTCGGACTTGGCTCGAGTACCCAGCCCCAAAGTTGTGCTTGCCAGCCAGCCTGACCTGGAATGTGGATTCTCAAGAGATCTCTTTATTCAGTGGTGTCAGGACCCTAAAAACTCAATAATTCTAACTTACAGAACTACTCCTGGGACTTTAGCACGTTTCCTGATTGATAATCCTTCTGAAAAAATTACAGAAATAGAGCTGAGGAAACGTGTGAAGCTTGAAGGGAAAGAACTTGAGGAATACTTGGAAAAAGAGAAACTAAAGAAAGAAGCTGCTAAAAAACTTGAGCAGTCAAAAGAGGTGGATATAGATTCCAGTGATGAGAGTGATGTTGAGGAAGATATTGACCAGCCATCGGCTCATAAGACAAAGCATGACCTGATGATGAAAGGTGAAGGTAGTCGTAAAGGAAGCTTCTTCAAACAGGCAAAAAAGTCTTATCCTATGTTTCCTGCCCCAGAAGAAAGAATTAAATGGGATGAATATGGAGAAATTATCAAACCAGAGGATTTCTTAGTGCCAGAACTTCAAGCTACTGAAGAAGAAAAAAGCAAATTAGAATCTGGTTTGACAAATGGAGATGAGCCCATAGATCAGGATTTATCTGATGTTCCGACTAAGTGTATTTCTACAACAGAATCTATTGAAATAAAAGCCAGGGTTACTTACATAGACTATGAAGGACGCTCTGATGGAGATTCCATTAAAAAAATCATTAATCAGATGAAACCACGCCAGCTGATAATTGTCCACGGCCCACCAGAGGCCAGTCAAGATCTGGCGGAGTGCTGCCGTGCATTTGGCGGGAAAGACATTAAAGTGTACATGCCGAAGCTGCACGAAACAGTCGATGCTACGAGTGAAACACACATCTACCAGGTGAGATTAAAAGACTCACTTGTCAGCTCCCTTCAGTTTTGTAAGGCAAAAGATGCTGAATTAGCGTGGATCGATGGTGTCCTAGACATGAGAGTTTCCAAAGTGGACACGGGAGTAATTTTAGAAGAAGGAGAGCTCAAGGATGACGGAGAAGACTCAGAAATGCAAGTGGATGCTCCTTCAGATTCCAGCGTGATAGCACAACAGAAGGCCATGAAAAGTCTGTTTGGAGATGATGAGAAAGAAACGGGTGAAGAGAGTGAGATCATCCCTACTTTGGAGCCCTTGCCCCCTCACGAGGTTCCTGGACATCAGTCAGTTTTTATGAATGAACCAAGACTATCAGACTTCAAGCAAGTTCTTTTACGGGAGGGGATTCAAGCTGAATTTGTAGGAGGTGTACTTGTTTGCAACAATCAAGTAGCAGTCCGAAGAACGGAAACTGGACGCATTGGATTAGAAGGCTGTCTTTGTCAAGATTTTTATAGGATAAGAGACCTTTTGTATGAACAGTATGCCATCGTGTAA

Related Sequences

XP_004837079.1 Protein

Cpsf2 PREDICTED: cleavage and polyadenylation specificity factor subunit 2 [Heterocephalus glaber]

Length: 782 aa      View alignments
>XP_004837079.1
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEVDIDSSDESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPIDQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYAIV