Details from NCBI annotation

Gene Symbol Syne3
Gene Name spectrin repeat containing, nuclear envelope family member 3
Entrez Gene ID 101722356

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYNE3 ENSCPOG00000010944 (Guinea pig)

Gene Details

spectrin repeat containing, nuclear envelope family member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009835, Guinea pig)

Protein Percentage 77.21%
CDS Percentage 85.7%
Ka/Ks Ratio 0.28909 (Ka = 0.1251, Ks = 0.4327)

SYNE3 ENSG00000176438 (Human)

Gene Details

spectrin repeat containing, nuclear envelope family member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000334308, Human)

Protein Percentage 73.61%
CDS Percentage 80.84%
Ka/Ks Ratio 0.1688 (Ka = 0.1564, Ks = 0.9266)

Syne3 ENSMUSG00000054150 (Mouse)

Gene Details

spectrin repeat containing, nuclear envelope family member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093090, Mouse)

Protein Percentage 72.46%
CDS Percentage 79.34%
Ka/Ks Ratio 0.16425 (Ka = 0.1665, Ks = 1.0135)

Syne3 ENSRNOG00000005287 (Rat)

Gene Details

nesprin-3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036723, Rat)

Protein Percentage 69.72%
CDS Percentage 76.76%
Ka/Ks Ratio 0.15326 (Ka = 0.1989, Ks = 1.2981)

Genome Location

Sequence Coding sequence

Length: 2937 bp    Location: 7945987..7896069   Strand: -
>XM_004837010.1
ATGACCCAGCAGCCCCGAGAGGGCTTCGACAGGAGCGTGCAGGAGACCCGAGCATGGATGCAGGCGGTGCAGGAGCAGCTGCAGGTCAATGACAACACCCAGGGGCCCCTGGCGGCCCTGGAGGCCAGACTGCAGGAGACTGAGAAGATCTGCCGGCTGGAGCCCGAGGGGCAGCTGAAGGTAGACCTGGTGCTTCAAGCAGCAGAGACCCTCCTGGCATGCTGCCTGGAGGACCAGCGGCCTGAGATCCTGGCCCGGCTAAGGGAACTCAAGGACCAGTGGGAGGAGACGGTCACCTACATGACTCACTGTCACAGCCGCATCGAGTGGGTCTGGCTGCACTGGAGGGAGTACCTGCTGGCCCGGGACGAGTTCTACTGCTGGTTTCAGAAGATGGTGGTCATGCTGGAGCCCCCGGCCGAGCTGCAGCTGGGCCTGAAGGAGAAGCAGTGGCAGCTGAGCGATGCCCAGGTGCTGCTGCACAATGTGGAGAACCAGGCTGAGCTCTTGGACAGGCTGCTGGAGGAGGCGGCCTCCCTGTTCAATAGGATCGGGGACCCCAGCGTGGATGAAGAGGCACAGAGGAGGATGAAGACTGAGTTCGACACAGTGAAGGCCAAAGCCCAGAACCGGGTGGACCTGCTGGCGAGGGTGGCCCAGGAGCATGAGGAGTACCAGGTAGGCGTGGATGAGTTCCAGCTGTGGCTGAGGGCACTGGTGGAGAAGGTGCAGAACTGCGTGGGCAGCCGCTGCCATCTGTCCGCCGAGCTCCACCTCTCTGAGCTGCAGGACATCACCAAGGATTTCTCCCAGGGTGAGGAGTCTTTGAGGAGGCTGGAGGCACAGTCTGCCTGCATCATACAGAACACCTCTCCCTTGGGTGCCGAGAAAATCACCAGGGACCTGGAGGAGATGCGGAAGGTCCTGCAGAAGCGGCGGGTCCTCTGGGAGGCGGAGAAGGCACAGCTGCAGGACCTGCTCTCATCCAAGGGTGCCGGTGAGCAGCGGATCCAGTGGCTGGAGGCCGAGCTCGGAGAGTTCCGGAAGGGCCTCCAGAGGCTGGCCCAGGGCGGGCTGGAGCCCTCAGCAACGGTGATGACAGTGGGGACTGAAGATGAGCTGGTGGCCCGCTGGAGGCTCTACTCGGTGTCGAGGGCAACACTGGCCTCGGAGGAGCCGCGGGTGGACCAGCTGCAGGCCCAGCTGAAGGAGCTTGTTGCCCTCCCTAACCTGCAGCCGCTGTGTGACAGTGTGGTGGCCGCCATCCAGGAATTCAAGAGCATGAAGGGGAAGAGCACCAGGCTGTGCAATGCCACCAGGGTGGCCCTGTGGCAATGCTTCCAGCGACCCCTCCATGATCTGCAGCTGTGGCGGGCCCTGGCCCAGCGGCTCCTGGATGTCACCATCAGCCTGCCAGACCTGCCCTCCATCCACACCTTCCTGCCCCAGATCAAGGCGGCCCTGGTGGAGAGCTCCCGCCTGAAGGAGCAGCTGGGGTCTCTGCCGCTGAAGAGGGATCTGCTGGGCAGCGTCTTCGGCCAGGAGAGAGCCTCGGGCCTCCTGGAGCAGGCGGAGAGCTGCCTGCGGGACAGAGACCTGCTGCACAGCGGCCTGCTGCGGAGGAAGAGCAAACTGCAGAGTTCGCTTGCTCAGCACAAAGACTTTGGGGCTGCTTTCGAGCCCCTGCAGAAGAAGCTGCTGGACCTCCGGGCCAGGGTCCAAGCTGAGAAAGGGCTTCAGCCGGACCTTCCGGGGAAAAAGGCCCAGCTCCTGCGGCTGCAGGGCCTGCAGGAGGAGGGACTGGAGCTGGAGATGCAGATAGAGGCCATGAGGCCTCTTGTCCGGGGGGATTCCAGCCACCAGCACAAAATGGATCAGCTCTCCTCTGACTACCGGACCCTGCACAGGTCCCTGAAGGACCGCATGGACAGGTGTCGGCAGAGTGTGCAGGAGCATTGCACCTTCAGCTGCCGGCTGCTAGAGCTGCAGCAGTGGGTCACCATGGCCACACGGACGCTGGAGTCGCACCGAGGGGATGTGGGCCTGTGGAATGCCAAGTCCCAAGAGGCTTCGGTCGAGACACTGGCAGCTGAGCTCCCCAAGAAGGAGGCCTGCCTGGCCCTGGTGGAGGCGCACGGCCGGCTGGTGATGGAGAAGTCTTCTCCGGAGGGCGTGGCCATGGTCCAGGAGGAGCTGAAGGAGCTGGCGGAGTCCTGGCAGGCCCTGCAGCAGCTGGAGGAGAACATGCTGAGCCTCATCAGAAACCGGCAGCTGCAGAGCACAGAGGTGGACTCAGGGAGGAAGCTGGTTTTCACCAACAACATCCCAAAGTCGGGGTTCCTCATCAACCCCCTGGATCCTATCCCCAGGCGCCGGCGGCACGGGGCACATCTGCTGGAGGAAGGTGAAGGCAGCCATGAAGATTTCTCCCAGCTCCAGAGGAACTTTGAACAGTGGCTGCAGGTGGAGAATTCCAAGCTGGTTAGAATCATTGCGATGAGAGCCACCTCGGCCAAGGACAGGAGGACCAGAGAGGCAAAGCTGCAGGAGCTGCAGGCGCGAATCCCAGAAGGGCAGCACCTCTTGGAGAACCTCCTTCATCTTGGGCCCTCGAGGCCGGTCTCAGAGGAGCTGGAAGACCTGCGCTACTGCTGGATGCTGTACAAATCCCAGCTCAAGGATGCTGGCCACCTGCTGCCACGGAGTTCTGCAGGGGAGCTGAGCGGATCTCAGAAGGTGCGGCGGGCGCATGGTCCGTGCTCCCTGCTCCGGAAGGCGTGCTGTCTGGTGCTCTGGTTGCTGCTGTTGCTCCTGCTGTTTCTGCTGCTGCTCTTCCTGCTGCCGGCTGGAGAGGAGGCCCTCAGCTGCACCCAGGCCAACAACTTCGCCAGCTCCTTCCTGCTCATGCTCCACTACAATGGCCCCCCACCCACCTAG

Related Sequences

XP_004837067.1 Protein

Syne3 PREDICTED: nesprin-3 [Heterocephalus glaber]

Length: 978 aa      View alignments
>XP_004837067.1
MTQQPREGFDRSVQETRAWMQAVQEQLQVNDNTQGPLAALEARLQETEKICRLEPEGQLKVDLVLQAAETLLACCLEDQRPEILARLRELKDQWEETVTYMTHCHSRIEWVWLHWREYLLARDEFYCWFQKMVVMLEPPAELQLGLKEKQWQLSDAQVLLHNVENQAELLDRLLEEAASLFNRIGDPSVDEEAQRRMKTEFDTVKAKAQNRVDLLARVAQEHEEYQVGVDEFQLWLRALVEKVQNCVGSRCHLSAELHLSELQDITKDFSQGEESLRRLEAQSACIIQNTSPLGAEKITRDLEEMRKVLQKRRVLWEAEKAQLQDLLSSKGAGEQRIQWLEAELGEFRKGLQRLAQGGLEPSATVMTVGTEDELVARWRLYSVSRATLASEEPRVDQLQAQLKELVALPNLQPLCDSVVAAIQEFKSMKGKSTRLCNATRVALWQCFQRPLHDLQLWRALAQRLLDVTISLPDLPSIHTFLPQIKAALVESSRLKEQLGSLPLKRDLLGSVFGQERASGLLEQAESCLRDRDLLHSGLLRRKSKLQSSLAQHKDFGAAFEPLQKKLLDLRARVQAEKGLQPDLPGKKAQLLRLQGLQEEGLELEMQIEAMRPLVRGDSSHQHKMDQLSSDYRTLHRSLKDRMDRCRQSVQEHCTFSCRLLELQQWVTMATRTLESHRGDVGLWNAKSQEASVETLAAELPKKEACLALVEAHGRLVMEKSSPEGVAMVQEELKELAESWQALQQLEENMLSLIRNRQLQSTEVDSGRKLVFTNNIPKSGFLINPLDPIPRRRRHGAHLLEEGEGSHEDFSQLQRNFEQWLQVENSKLVRIIAMRATSAKDRRTREAKLQELQARIPEGQHLLENLLHLGPSRPVSEELEDLRYCWMLYKSQLKDAGHLLPRSSAGELSGSQKVRRAHGPCSLLRKACCLVLWLLLLLLLFLLLLFLLPAGEEALSCTQANNFASSFLLMLHYNGPPPT