Details from NCBI annotation

Gene Symbol Clmn
Gene Name calmin (calponin-like, transmembrane)
Entrez Gene ID 101721644

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLMN ENSCPOG00000004228 (Guinea pig)

Gene Details

calmin (calponin-like, transmembrane)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003814, Guinea pig)

Protein Percentage 82.48%
CDS Percentage 86.22%
Ka/Ks Ratio 0.29017 (Ka = 0.1023, Ks = 0.3524)

CLMN ENSG00000165959 (Human)

Gene Details

calmin (calponin-like, transmembrane)

External Links

Gene Match (Ensembl Protein ID: ENSP00000298912, Human)

Protein Percentage 71.74%
CDS Percentage 79.24%
Ka/Ks Ratio 0.33641 (Ka = 0.1779, Ks = 0.5289)

Clmn ENSMUSG00000021097 (Mouse)

Gene Details

calmin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105563, Mouse)

Protein Percentage 70.18%
CDS Percentage 75.24%
Ka/Ks Ratio 0.23354 (Ka = 0.2001, Ks = 0.8566)

Clmn ENSRNOG00000011044 (Rat)

Gene Details

calmin (Clmn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061235, Rat)

Protein Percentage 70.29%
CDS Percentage 75.44%
Ka/Ks Ratio 0.23335 (Ka = 0.1958, Ks = 0.8392)

Genome Location

Sequence Coding sequence

Length: 2940 bp    Location: 7797763..7716202   Strand: -
>XM_004837009.1
ATGGCTGCGCAGGAATGGGACTGGTTCCAGCGCGAGGAGCTCATCGGGCAGATCAGCGACATCCGCGTGCAGAACCTGCAAGTTGAGAGGGAAAATGTTCAGAAGAGGACTTTTACTCGATGGATAAATCTACATCTTGAAAAGTGTGATCCACCTCTAGAAGTTACAGACCTCTTCGTTGATATACAAGATGGCAAAATCCTCATGGCTTTGTTAGAAGTCCTGTCCGGGCGGAATCTGCTGCATGAGTACAAATCCTCCTCGCATCGGATTTTTCGGTTGAACAACATAGCGAAAGCACTTTCTTTCCTGGAAGATAGCAACGTAAAACTGGTTAGCATCGATGCAGCAGAAATAGCGGACGGCAACCCCTCTCTGGTTCTCGGGCTGATATGGAACATCATCCTCTTCTTCCAGATTAAGGAGCTCACGGGCAACCTCAGCAGGAGCTCCCCATCCTCCAGCCTGTCACCCGGCTCGGGGGGCACAGACTCGGACTCCTCCTACCCACCCACGCCCACCACCGAGAGGAACGCGGCCATCGCGGTGAAAGACCAGAGGAAGGCCATCAAGACCCTGCTGGCCTGGGTGCAGAGGAAGACGAGGAAGTATGGCGTGGCAGTGCAGGACTTTGCGGGCAGCTGGAGAAGCGGGCTGGCTTTCCTGGCTGTGGTCAAGGCCATTGACCCTAGCCTGGTGGACATGAAGCAGGCCCTGGAGGAGTCACCGAGGGAAAACCTAGAGAAGGCTTTTCGCATTGCACATGAGGCCCTGCACATCCCCAGGCTCCTGGAGCCGGAAGACATCATGGTTGATGTGCCGGACGAGCAGTCCCTTGTGACCTACGTGGCACAGTTTCTAGAACGTTTTCCGGAGCTGGAAGCCGAAGAGTTCGTGGATCCAGATAAAGAAGTTCCCATCGAGTCCACTTTTGTCCGCATCCGAGAAACTCCTCCTGACCAGGAGAGCAAGGTCCTCCTCCTGACACAGAATGGAGAGCGAACCTATACCACGAACCATGAAACCAGCCACCCGCCCCCTGCCAAAGTCTTCGTCTGCGACCGGCCTGAGTGTAGCACATCCAGCAGCATGTCAGACAGCTCCGCCGAGTTCGTGCACCAGATCATCGACCAGATCCTCCAGGAGGGGCCGGGGAAGACCGGTGCCACCAGCGAGTCCACTCCCGAATCTTCCATCTTGTCCACCAGAAAGGACAGCCGCAGGTCCAGCCTTCTGCCCACCAAGAAAACTGTGCACTTTGAGGATGGCACCTACAAGGACACTTCCTATAGCCAGGAGCCTTTCTACAGCCCCGACTTTCGCTTTGAAGGGAGTCCGAGGGCAGTGAGGGAGCTACTGAGGCAGGGCAGGCATGCCTCAGTGGAGGAGGATGTCGAAGAAAGGAAACTGGAAGAGGCAGCCTCGCTGGTCCCAGAAGCGGGCTCCGGTGAGGTCTCTAGGGCCGATGGCACAATGGGTCACACACAGCCACCCCAGGATTCTTCCTCCTTTAATGGCTCCTTAGAGGCTCCAGCCAGCCACAGTGAAGAAAGTCCTTCTCTCCCGCCCTTTGGGGTAAAGACTGTCCTGGCCGATTCTGTAAAGATCGAGGTTGAGCTGCAGACTGCAGAAGCTATGCAGAAAGACTTTCTGGAAGATGTCCCATCACAAGCCGTGATCAGCAGCATGGTAGATTTGGCTTCCACCAGCCAGGCTTTGGGTGAGGCTCCTTCTGGTGAGAAGGCAGCTGGCGAGGAGGAGGAGGCCTCTAGGAACTGTGCCCAGGAGCCACCAGTGAGGTGTGACAGACACAAGCCCCCCACAGGCTCAGGACGAGACTCTCCAGGCTACTCTGTGTCCCCCGGAGAGACAGCTGTGGATAAAAAGCCAGAGACACCTGTGCATGAAAAAGCCAAGAGGAAGTCCCCCCGGCATTGCAGTGAGGATGAGGAAGAAGCCGATGGTCCCCCAGGGCTTGGTGAAGAACTGTCCTCCAACTCCCTAAGGGGCAGCATCAGCTTGGAGACCCTCAGCAGCCCCAGTGAGGAAGGCCTGGATTTCAAGCCCTCGCCTCCCCTCTCCAAGATTTCCGTCATTCCCCACGACCTCTTCTATTACCCGCACTACGAGGTGCCCCTGGCTGCGGTTTTAGAGGCATATGCGGAGGGTAGGGAGGACGAGAGGAGTGTGGACTTGGAGCTGGAAGAGCCCATGGACTGTCTGCCCGACCTGGAGCCCAGTGAGGACAACGCCGAAGGCCCTTTGAGCAGCTGCAGCTTCTCAGGCCCGGGCCAGGGTCTCCCCAGCGCCAGCAACCAGGTGCTGCCTCCCAGCAGGCACACTGTGGTGGCCACACCAGCCTCAGGACCCGCTCCCCCAGCCCTGAGTGGGGACCAGCAGCCACGGGAGGCCAAGGAGAGCAACCCTGTTGGGAGCCATCAGTCCCCAAAATTCCCAGACTCAGAAAACACAGCAAACTCCTTAGAAGAAAAGGTAATGGAAGAATCAACCAGCAGTAAAAAAAAGGAAAAAAGGAAACATGTGGACCACGTAGAAAGCTCCTTATACAGAGCACCTGGAATTGTTCAGTCCTCAGAAGACCTAGAAGACAACATTGGCGACCACAGGGTCCCTTCCAGGACTAGTCACAGTGACTCCAGCATTTACATTCGACGTCATACGAATAGATCTGCGGAGTCGGACCATATTAGCTTTGTTCAGTTGAGGAATGCAGCAGATGTGGATGACAGAAGAAACCGAATGTTAACCAGGAAGGCCAGTAGCTCTGGAGAAGCTGAGTCGCTGGGGAGCCAGAGCATGCCGAGTGACTCCCTGACACAGCTGGTCCAGCAGCCGGACATGATGTATTTTATCCTCTTCCTCTGGCTCCTGGTCTACTGTCTGCTGCTCTTCCCACAGCTGGATATCAACAGGCTCTGA

Related Sequences

XP_004837066.1 Protein

Clmn PREDICTED: calmin [Heterocephalus glaber]

Length: 979 aa      View alignments
>XP_004837066.1
MAAQEWDWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCDPPLEVTDLFVDIQDGKILMALLEVLSGRNLLHEYKSSSHRIFRLNNIAKALSFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQIKELTGNLSRSSPSSSLSPGSGGTDSDSSYPPTPTTERNAAIAVKDQRKAIKTLLAWVQRKTRKYGVAVQDFAGSWRSGLAFLAVVKAIDPSLVDMKQALEESPRENLEKAFRIAHEALHIPRLLEPEDIMVDVPDEQSLVTYVAQFLERFPELEAEEFVDPDKEVPIESTFVRIRETPPDQESKVLLLTQNGERTYTTNHETSHPPPAKVFVCDRPECSTSSSMSDSSAEFVHQIIDQILQEGPGKTGATSESTPESSILSTRKDSRRSSLLPTKKTVHFEDGTYKDTSYSQEPFYSPDFRFEGSPRAVRELLRQGRHASVEEDVEERKLEEAASLVPEAGSGEVSRADGTMGHTQPPQDSSSFNGSLEAPASHSEESPSLPPFGVKTVLADSVKIEVELQTAEAMQKDFLEDVPSQAVISSMVDLASTSQALGEAPSGEKAAGEEEEASRNCAQEPPVRCDRHKPPTGSGRDSPGYSVSPGETAVDKKPETPVHEKAKRKSPRHCSEDEEEADGPPGLGEELSSNSLRGSISLETLSSPSEEGLDFKPSPPLSKISVIPHDLFYYPHYEVPLAAVLEAYAEGREDERSVDLELEEPMDCLPDLEPSEDNAEGPLSSCSFSGPGQGLPSASNQVLPPSRHTVVATPASGPAPPALSGDQQPREAKESNPVGSHQSPKFPDSENTANSLEEKVMEESTSSKKKEKRKHVDHVESSLYRAPGIVQSSEDLEDNIGDHRVPSRTSHSDSSIYIRRHTNRSAESDHISFVQLRNAADVDDRRNRMLTRKASSSGEAESLGSQSMPSDSLTQLVQQPDMMYFILFLWLLVYCLLLFPQLDINRL