Sequence details NCBI ID: XM_004836983.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Bcl11b
Gene Name B-cell CLL/lymphoma 11B (zinc finger protein), transcript variant X2
Entrez Gene ID 101712090

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BCL11B ENSCPOG00000009946 (Guinea pig)

Gene Details

B-cell CLL/lymphoma 11B (zinc finger protein)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008925, Guinea pig)

Protein Percentage 98.31%
CDS Percentage 96.58%
Ka/Ks Ratio 0.02919 (Ka = 0.0071, Ks = 0.2428)

BCL11B ENSG00000127152 (Human)

Gene Details

B-cell CLL/lymphoma 11B (zinc finger protein)

External Links

Gene Match (Ensembl Protein ID: ENSP00000349723, Human)

Protein Percentage 97.08%
CDS Percentage 94.46%
Ka/Ks Ratio 0.02955 (Ka = 0.0123, Ks = 0.4178)

Bcl11b ENSMUSG00000048251 (Mouse)

Gene Details

B cell leukemia/lymphoma 11B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000068258, Mouse)

Protein Percentage 94.07%
CDS Percentage 89.21%
Ka/Ks Ratio 0.03932 (Ka = 0.0283, Ks = 0.7208)

BCL11B ENSRNOG00000005776 (Rat)

Gene Details

B-cell lymphoma/leukemia 11B isoform 2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007602, Rat)

Protein Percentage 95.13%
CDS Percentage 89.34%
Ka/Ks Ratio 0.02606 (Ka = 0.0227, Ks = 0.8695)

Genome Location

Sequence Coding sequence

Length: 2694 bp    Location: 4560699..4647858   Strand: +
Raw sequence   
>XM_004836983.1
ATGTCCCGCCGCAAACAGGGCAACCCGCAGCACTTGTCCCAGAGGGAGCTCATCACGCAGGCTGACCATGTGGAGGCTGCCATCCTTGAGGAAGACGAGGGTCTGGAGATAGAGGAGCCCAGCGGCCTGGGGCTGATGGTGGGTGGCCCCGACCCTGACCTGCTCACCTGTGGCCAGTGTCAGATGAACTTCCCCCTGGGGGACATCCTGGTTTTTATAGAGCACAAGAAGAAGCAGTGTGGCGGTAGCCTGGGTGCCTGCTATGACAAAGGCCTGGACAAAGGCAGCCCGCCGCCCTCCTCGCGCTCTGAGCTCAGGAAAGTGTCCGAGCCGGTAGAGATCGGAATCCAGGTCACCCCGGACGAAGATGACCACCTGCTCTCACCCACGAAAGGCATCTGCCCCAAGCAGGAGAACATTGCAGGGCCGTGCAGGCCTGCCCAGCTGCCAGCGATGGCCCCTATAGCTGCCTCCTCCTCCCTCCCTCACACATCAGTGATCGCTTCACCTCTGCGGGCCCTGGGCACACTCCCGCCCTGCTTCCCGCTGCCCTGCTGCAGTGCGCGCCCCGTGTCGGGCGACGGGACTCAGGGTGAGGGTCAGACGGAGGTTCCCTTTGGATGCCAATGTCAGTTGTCAGGTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTCAACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGATTCCGCATCTACCTGGAGCCTGGGCCGGCCAGCAGCTCGCTCACGCCGCGCCTCACCATCCCTCCGCCGCTCGGGCCCGAGGCCGTGGCGCAGTCCCCGCTCATGAATTTCCTCGGAGACAGCAACCCCTTCAACCTGCTGCGTATGACGGGCCCCATCCTGCGAGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCCGGCACGCCGCCGCTCTTCAGCCCGCCGCCGCGACACCACCTGGACCCGCACCGCCTCAGCGCCGAGGAGATGGGGCTCGTGGCCCAGCACCCCAGTGCCTTCGACCGAGTCATGCGCCTGAACCCCCTGGCCATCGACTCGCCCGCCATGGACTTCTCGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCGCCACCCCGCCGCCCGTGTCGCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCGTTTCAGCCCAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCCCCCATGGCCCCCGGCGGCACGCCCCCGCCGCAGCCGCCGACCAAGAGCAAGTCGTGCGAGTTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATTGTGCACCGTCGCAGTCACACGGGGGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGTGCTCGCAGGCGAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAGGCGGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTGTCAGTCGCCAGCTCCCCCGAGCCCGGCACCAGCGAGCTGGCCGGCGAGGGCCTCAAGGCGGCCGACGGCGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCATGAGCCCGAGGAGGAGGACGAGGAGGAGGAGGAGGAGGAAGAGGAGCTGCTGCTGGAGAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCCGCAATCGCGAGAATGGCGGCGGCGTGGTGGCCGGCGTGGCGGGCGCGGGCGGCGTGGGCGTGGGCGGCGCGGCCAAGGCGCTGGCTGATGAGAAGGCGCTGGTGCTGGGCAAGGTCATGGAGAACGTGGGCCTGGGCGCGCTGCCCCCGCAGTACGGCGACCTCCTGGCCGACAAGCAGAAGCGTGGCGCCTTCCTGAAACGCGCAGCCGGCGGCGGGGACGCGGGCGACGAGGACGACGCGGGCGGCTGTGGGGACTCGGGCGCGACTGGCGCGGTGAACGGGCGTGGCGGCGGCTTCGCGCCGGGCACCGAGCCCTTCCCGGGCCTGTTTCCGCGCAAGCCCGCGCCCATGCCCAGCCCCGGGCACAACAGCAAGCGCATTAAGGTGGAGAAGGACCTGGAGCTGCCACCCGCCGCGCTCATCCCCTCGGAGAACGTGTACTCGCAGTGGCTCGTGGGCTATGCGGCGTCACGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACGGACGCGCGCCAGTCGCCCTTCGCCACGTCCTCCGAGCACTCGTCCGAGAACGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGGGCTGTCGGGGCGCAGCGGCACGGCCAGCGGGGGCAGCACCCCGCACCTGGGCGGCCCGGGCCCTGGCCGGCCGAGCTCCAAGGAGGGCCGGCGCAGCGATACATGCGAGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACCTGACGGTGCACCGGCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAACTACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGGGCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCAGCGTCTACAGCACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCACTTGCTAACTAACGACGTCAAAATCGAGCAGGCGGAGAGGAGCTAA

Related Sequences

XP_004837040.1 Protein

Bcl11b PREDICTED: B-cell lymphoma/leukemia 11B isoform X2 [Heterocephalus glaber]

Length: 897 aa      View alignments
>XP_004837040.1
MSRRKQGNPQHLSQRELITQADHVEAAILEEDEGLEIEEPSGLGLMVGGPDPDLLTCGQCQMNFPLGDILVFIEHKKKQCGGSLGACYDKGLDKGSPPPSSRSELRKVSEPVEIGIQVTPDEDDHLLSPTKGICPKQENIAGPCRPAQLPAMAPIAASSSLPHTSVIASPLRALGTLPPCFPLPCCSARPVSGDGTQGEGQTEVPFGCQCQLSGKDEPSSYICTTCKQPFNSAWFLLQHAQNTHGFRIYLEPGPASSSLTPRLTIPPPLGPEAVAQSPLMNFLGDSNPFNLLRMTGPILRDHPGFGEGRLPGTPPLFSPPPRHHLDPHRLSAEEMGLVAQHPSAFDRVMRLNPLAIDSPAMDFSRRLRELAGNSATPPPVSPGRGNPMHRLLNPFQPSPKSPFLSTPPLPPMAPGGTPPPQPPTKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSLAGRSDDGLSVASSPEPGTSELAGEGLKAADGDFRHHESDPSLGHEPEEEDEEEEEEEEELLLENESRPESSFSMDSELSRNRENGGGVVAGVAGAGGVGVGGAAKALADEKALVLGKVMENVGLGALPPQYGDLLADKQKRGAFLKRAAGGGDAGDEDDAGGCGDSGATGAVNGRGGGFAPGTEPFPGLFPRKPAPMPSPGHNSKRIKVEKDLELPPAALIPSENVYSQWLVGYAASRHFMKDPFLGFTDARQSPFATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLLTNDVKIEQAERS