Details from NCBI annotation

Gene Symbol Setd3
Gene Name SET domain containing 3, transcript variant X4
Entrez Gene ID 101710371

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SETD3 ENSCPOG00000027403 (Guinea pig)

Gene Details

SET domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015387, Guinea pig)

Protein Percentage 91.91%
CDS Percentage 89.21%
Ka/Ks Ratio 0.10751 (Ka = 0.0424, Ks = 0.3939)

SETD3 ENSG00000183576 (Human)

Gene Details

SET domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000327436, Human)

Protein Percentage 90.6%
CDS Percentage 87.01%
Ka/Ks Ratio 0.10231 (Ka = 0.0507, Ks = 0.4956)

Setd3 ENSMUSG00000056770 (Mouse)

Gene Details

SET domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066413, Mouse)

Protein Percentage 90.1%
CDS Percentage 86.75%
Ka/Ks Ratio 0.10242 (Ka = 0.0517, Ks = 0.5048)

Genome Location

Sequence Coding sequence

Length: 1782 bp    Location: 4406299..4468593   Strand: +
>XM_004836980.1
ATGGCCAGTCGGAAAATGGGTAAGAAGAGTCGAGTAAAAACGCAGAAATCGGGCACTGGGGCTGCAGCCAGCGTGTCTCCGAAGGAAATGTTGAACCTGACCGAATGCAGCAGTCCTGCACCCAGCCCAGGAAAAGAATGGGAAGAGTATGTGCAGATCCGGTCCCTGGTTGAGAAAATACGGAAAAAGCAAAAAGGTCTGTCTGTTACTTTTGATGGAAAAAGAGAAGATTACTTTCCTGATCTAATGAAATGGGCCTCTGAAAATGGGGCGTCTGTCGAGGGTTTTGAAATGTTTAACTTCAAAGAAGAGGGCTTTGGTTTGAGAGCAACAAGAGACATCAAGGCAGAAGAATTATTTTTATGGGTTCCACGAAAATTGCTAATGACTGTTGAATCTGCTAAAAATTCAGTATTGGGCCCCTTATATTCTCAAGACCGAATTCTTCAAGCCATGGGAAATATCGCACTGGCCTTCCATCTGCTGTGTGAGCGAGCCAGCCCCAGCTCTTTCTGGCTGCCCTACATTCAGACCCTCCCCAGTGAGTACGACACTCCTCTCTACTTTGAAGAAGAGGAAGTTCGGTGTATTCAGTCAACACAAGCCATCCACGATGTCTTCAGCCAGTATAAAAACACAGCTCGACAGTATGCCTATTTCTATAAAGTTATCCAGACCCATCCTCATGCCAACAAACTGCCCTTGAAGGATTCTTTCACTTATGAGGACTACAGGTGGGCCGTCTCTTCTGTAATGACTCGACAAAACCAGATTCCCACGGAGGATGGTTCCCGGGTGACCCTGGCCCTGATTCCCCTGTGGGATATGTGTAACCACACCAACGGCCTGATCACGACCGGCTACAACCTGGAGGACGACCGCTGCGAGTGTGTGGCCCTGCAGGACTTCCAGGCCGGGGAGCAGATTTACATTTTTTATGGCACTCGGTCAAATGCAGAGTTTGTGATCCACAGTGGTTTTTTCTTTGACAACAATTCACACGACAGAGTGAAAATAAAGCTTGGCGTGAGTAAAAGCGACCGGCTGTACGCGATGAAGGCGGAGGTCTTGGCTCGCGCTGGCATCCCAACGTCCAGTGTTTTTGCACTGCATTTTACGGAGCCACCCATCTCTGCTCAGCTTCTGGCTTTTCTCCGAGTATTCTGCATGACTGAAGAAGAGCTGAAAGAACATTTGCTAGGAGAGAATGCTATCGATAGGATCTTCACTCTGGGGAACTCTGAGTTTCCGGTCAGCTGGGAAAATGAGGTCAAACTTTGGTCGTTTCTCGAAGATCGAGCTTCTCTTCTTTTAAAAACATATAAAACAACAACTGAGGAGGACAAAGCCGTCCTGAAGAACCCTGACCTTCCTGCCCGCACGAAGATGGCCATCAAGCTGCGGCTGGGGGAGAAGGAGATTCTAGAGAAAGCCGTGCAGAGCGCGGCCACCAACCGGAAGTGCTTCCGCAAGCACATGGAGGAGCAGGCACCACTCCCCAAGTACGAGGAGAGTAACCTTGGGCTGCTGGAGGGCGGCGCGGGTGACTCGAGGCTGCCCCTGGTCCTGCGAAACCTAGAGGAGGAGGCCGGGGTGCAGGAGGCCCTGAGCCGTAAGGAGGCCGGCAGCACTGCTGGACATGGGCTCATCAACGGCGAAAACTCTATCCCCAACGGGACTGGGTCCGAAAATGAGAATTTAAGTCCCGGAGAAAGCAAAAGAGCGATTGGAGGCGCCAAAGAATCTTCAGACAGCACTGACAAAGCCAGAGAGCAGCTCTGA

Related Sequences

XP_004837037.1 Protein

Setd3 PREDICTED: histone-lysine N-methyltransferase setd3 isoform X4 [Heterocephalus glaber]

Length: 593 aa     
>XP_004837037.1
MASRKMGKKSRVKTQKSGTGAAASVSPKEMLNLTECSSPAPSPGKEWEEYVQIRSLVEKIRKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMFNFKEEGFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFHLLCERASPSSFWLPYIQTLPSEYDTPLYFEEEEVRCIQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFQAGEQIYIFYGTRSNAEFVIHSGFFFDNNSHDRVKIKLGVSKSDRLYAMKAEVLARAGIPTSSVFALHFTEPPISAQLLAFLRVFCMTEEELKEHLLGENAIDRIFTLGNSEFPVSWENEVKLWSFLEDRASLLLKTYKTTTEEDKAVLKNPDLPARTKMAIKLRLGEKEILEKAVQSAATNRKCFRKHMEEQAPLPKYEESNLGLLEGGAGDSRLPLVLRNLEEEAGVQEALSRKEAGSTAGHGLINGENSIPNGTGSENENLSPGESKRAIGGAKESSDSTDKAREQL