Details from NCBI annotation

Gene Symbol Traf3
Gene Name TNF receptor-associated factor 3, transcript variant X3
Entrez Gene ID 101718736

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAF3 ENSCPOG00000001756 (Guinea pig)

Gene Details

TNF receptor-associated factor 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001587, Guinea pig)

Protein Percentage 95.94%
CDS Percentage 92.0%
Ka/Ks Ratio 0.03209 (Ka = 0.0169, Ks = 0.5274)

TRAF3 ENSG00000131323 (Human)

Gene Details

TNF receptor-associated factor 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000454207, Human)

Protein Percentage 95.41%
CDS Percentage 90.06%
Ka/Ks Ratio 0.03645 (Ka = 0.0206, Ks = 0.5659)

Traf3 ENSMUSG00000021277 (Mouse)

Gene Details

TNF receptor-associated factor 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021706, Mouse)

Protein Percentage 96.65%
CDS Percentage 88.42%
Ka/Ks Ratio 0.01697 (Ka = 0.0144, Ks = 0.8462)

Traf3 ENSRNOG00000008145 (Rat)

Gene Details

Tnf receptor-associated factor 3 (Traf3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010906, Rat)

Protein Percentage 96.12%
CDS Percentage 89.01%
Ka/Ks Ratio 0.02504 (Ka = 0.0182, Ks = 0.7267)

Genome Location

Sequence Coding sequence

Length: 1704 bp    Location: 1820257..1728353   Strand: -
>XM_004836912.1
ATGGAGCCGAGTAAAAAGATGGACTCAGCCGGCACGTTGCAAACCAACCCGCCGCTGAAGCTGCAGCCTGACCGCAGCGCGGGGTCCGTGTTTGTCCCCGAGCAAGGCGGCTACAAGGAGAAGTTTGTGAAGGCCGTGGAGGACAAGTACAAGTGCGAGAAGTGCCGCCTGGTGCTGTGCAACCCGAAGCAGACCGAGTGTGGGCATCGCTTCTGTGAGAGCTGCATGGCTGCGCTGCTCAGCTCCTCGAGTCCCAAGTGCACAGCGTGTCAAGAAGGCATCGTCAAAGAGAAGGTGTTTAAGGACAATTGCTGCAGGAGAGAGATCCTGGCCCTCCAGATCTGCTGTCGGAACGAAGGCAGGGGATGTTCGGAGCAGCTGACGCTCGGGCATCTGCTGGTGCACCTGAAGAATGACTGCCAATTCGAGGAGCTCCCCTGCTTGCGTGCCGACTGCAGGGAAAAGGTGCTGAGGAGAGACCTGCGAGATCACGTGGAGAAGGCCTGCAAGTACCGGGAGGCCACGTGCACCCACTGCAAGAGCCAAGTCCCGATGATCAAGCTGCAGAAACACGAAGACAGCGAGTGTCCCTGCGTGGTGGTGTCCTGCCCTCACAAGTGCAGTGTCCAGACTCTCCTGAGGAGCGAGTTGAGTGCACACTTGTCAGAGTGTGTCAATGCCCCCAGCACCTGTAGTTTTAAGCGCTATGGCTGCGTTTTTCAGGGGACGAACCAGCAGATCAAGGCCCATGAAGCCAGCTCGGCCGTGCAGCACGTCAACCTGTTGAAGGAGTGGAGCAACTCGCTGGAGAAGAAGGTTTCCTTGCTGCAGAATGAAAGTGTAGAAAAAAACAAGAGCATACAAAGTCTGCACAATCAGATCTGTAGCTTTGAAATTGAAATCGAGAGACAAAAGGAGATGCTGCGAAATAATGAATCCAAAATCCTTCACCTGCAGCGTGTCATAGACAGCCAGGCGGAGAAGCTGAAGGAGCTGGACAAGGAGATCCGTCCCTTCCGGCAGAACTGGGAGGAAGCAGACAGCATGAAGAGCAGCGTGGAGTCGCTGCAGAACCGTGTCACAGAGCTGGAGAGCGTGGACAAGAGTGCGGGGCAGGCGGCGAGGAACACAGGCTTACTGGAATCGCAGCTGAGCCGGCACGACCAGATGCTGAGCGTCCATGACATCCGCCTGGCCGACATGGACCTGCGCTTCCAGGTCCTGGAGACCGCCAGCTACAATGGCGTGCTCATCTGGAAGATCCGCGACTACAAGCGCCGGAAGCAGGAGGCTGTCATGGGGAAGACCCTGTCCCTCTACAGCCAGCCCTTCTACACTGGCTACTTCGGCTACAAGATGTGCGCCAGGGTCTACCTGAATGGGGACGGGATGGGGAAGGGGACGCACCTGTCGCTGTTTTTTGTCATCATGCGCGGAGAGTATGACGCCCTGCTGCCGTGGCCATTTAAGCAGAAAGTGACGCTCATGCTGATGGATCAGGGCTCCTCCCGGCGCCACCTGGGAGATGCGTTCAAGCCTGACCCCAACAGCAGCAGCTTCAAGAAGCCCACTGGAGAGATGAACATCGCCTCCGGCTGCCCCGTCTTTGTGGCCCAAACGGTTCTGGAAAATGGGACGTATATTAAAGATGATACAATTTTTATTAAAGTCATAGTGGATACTTCGGATCTGCCCGACCCCTGA

Related Sequences

XP_004836969.1 Protein

Traf3 PREDICTED: TNF receptor-associated factor 3 isoform X3 [Heterocephalus glaber]

Length: 567 aa      View alignments
>XP_004836969.1
MEPSKKMDSAGTLQTNPPLKLQPDRSAGSVFVPEQGGYKEKFVKAVEDKYKCEKCRLVLCNPKQTECGHRFCESCMAALLSSSSPKCTACQEGIVKEKVFKDNCCRREILALQICCRNEGRGCSEQLTLGHLLVHLKNDCQFEELPCLRADCREKVLRRDLRDHVEKACKYREATCTHCKSQVPMIKLQKHEDSECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP