Details from NCBI annotation

Gene Symbol Ppp1r13b
Gene Name protein phosphatase 1, regulatory subunit 13B, transcript variant X2
Entrez Gene ID 101709202

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPP1R13B ENSCPOG00000021000 (Guinea pig)

Gene Details

protein phosphatase 1, regulatory subunit 13B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018711, Guinea pig)

Protein Percentage 92.53%
CDS Percentage 90.41%
Ka/Ks Ratio 0.1163 (Ka = 0.0391, Ks = 0.3359)

PPP1R13B ENSG00000088808 (Human)

Gene Details

protein phosphatase 1, regulatory subunit 13B

External Links

Gene Match (Ensembl Protein ID: ENSP00000202556, Human)

Protein Percentage 91.71%
CDS Percentage 87.59%
Ka/Ks Ratio 0.0905 (Ka = 0.0432, Ks = 0.4775)

Ppp1r13b ENSMUSG00000021285 (Mouse)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 13B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062464, Mouse)

Protein Percentage 92.98%
CDS Percentage 86.51%
Ka/Ks Ratio 0.068 (Ka = 0.0388, Ks = 0.5711)

Ppp1r13b ENSRNOG00000012653 (Rat)

Gene Details

protein phosphatase 1, regulatory subunit 13B (Ppp1r13b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059338, Rat)

Protein Percentage 90.26%
CDS Percentage 83.8%
Ka/Ks Ratio 0.07922 (Ka = 0.0582, Ks = 0.7344)

Genome Location

Sequence Coding sequence

Length: 3363 bp    Location: 1122098..1205677   Strand: +
>XM_004836881.1
ATGATGCCGATGATATTAACCGTGTTCTTGAGCAACAATGAACAGATTTTAACAGACGTTCCTATAACACCGGAAACAACCTGTCGAGATGTTGTAGAATTTTGCAAGGAACCTGGAGAAGGCGGTTGCCATTTAGCTGAAGTGTGGAGGGGAAATGAGCGCCCCATACCCTTCGAGCACATGATGTATGAGCACCTGCAGAAGTGGGGGCCTCGGAGGGAAGAAGTGAAGTTTTTCCTGAGACATGAGGACTCCCCAACTGAGAGCAGTGAACAAGGTGGCCGCCAGACCCAAGAGCAGAGAACTCAAAGAAATGTGATAAATGTACCTGTAGAAAGACGTACTGAAAATGGGGTTGGGAATCCGCGTGTTGAACTCACCCTCTCAGAGCTCCAGGATATGGCAGCGAGGCAACAGCAGCAAATTGAAAACCAACAGCAAATGTTGGTGGCCAAGGAACAGCGTTTACACTTTCTAAAGCAACAGGAGCGTCGCCAGCAGCAGTCTATTTCTGAAAATGAGAAGCTTCAGAAGTTGAAAGAACGAGTTGAAGCCCAAGAAAACAAGCTAAAGAAAATTCGTGCCATGAGAGGACAACTTGATTACAGCAAAGTTATGAACGGCAGTCTGTCTGCTGAAATAGAAAGATTCAGTGCCATGTTCCAGGAGAAGAAGCAGGAAGTACAGACTGCAATTTTAAGAGTTGATCAGCTTAGTCAGCAATTGGAAGATTTAAAGAAAGGAAAACTGAATGGATTCCAGTCTTACAATGGCAAGCTGACAGGACCAGCTGCAGTGGAGTTGAAGAGACTCTACCAGGAGCTACAGATTCGTAACCAGCTTAACCAGGAGCAGAACTCAAAGCTGCAGCAGCAGAAGGAGCTCTTAAACAAGCGCAACATGGAGGTGGCCATGATGGACAAGCGCATCAGTGAGCTGCGCGAGCGTCTTTATGGCAAGAAGATTCAGCTAAACCGTGTGAATGGCACCTCATCCCCGCAGTCCCCCCTGAGCACATCCAGCAGGGTCGCTGCCGTGGGGCCTTACATCCAAGTCCCCAGTGGCGGAAGCCATCCTGTCCCAGGGGACCCTGTGAAGCCCCAGTCTCTCACTGTTGCCTCAAGTGCTGCCCACGGGAGATCTAAATCTGATGGCCACAGCAGACGCAGAGTGACCAGCATGTGGACGGTGTCAGATCTGGACGTCGGGCCTGACTATGGCCCCGCACAGCAGTCTGCCAGCCCCCTTGTGAACTCTAATGATGGCAACTGGCCGACATTAAAGCCGAATTCTGGCTCTTCGGGGAAGCCAGCACAGATGGCCAGCACAGACTGGAAGGAGTCGGGCGTGGAGGGAGCCCTAAAGCAGGGCGCCATCTCAAGCCAACCTCTGCCTTTGTCAGCCCTGGGAACCACAGAGAAGCTGGGCATCGAGATTGGCAAAGGGCCACCTCCTATGCCGGGCATAGGCAAACCACTGCCTCCAAGCTACGGGACATACCCAAGCCCTACACCTCAGGGCCCAGGGTCAACGAGCTCCCTGGAGAGGAGGAAAGACAGCAGTTTGCCCAGACCCGGTGCCGGCCTGCCAAGTCGGCAGAAGCCCGCCCTGCTGCCCCCAGCAGCCAGCACCCCCCAGCCTGGCTCCTCACAGCAGATTCAACAGAGGATTTCTGTGCCGCCAAGTCCCACGTACCCACCAGCAGGGCCACCTTCATTTCCACCTGGAGATGGCAAACCTGAACTCCCTCTGACAGTGGCCATTAGACCCTTTCTGGCTGACAAAGGGTCAAGGCCACAGTCTCCCCGCAAAGGACCCCAGACAGTAAATTCGAGTTCCATATACTCCATGTACCTCCAGCAAGCCACACCACCTAAGAACTACCAACCAGCGGTGCACGGCACCTTAAACAAGTCAGTAAAAGCAGTGTACGGCAAGCCTGTCTTAGCATCAGGGTCGACGTCTCCATCACCCTTACCGTTTCTTCACGGCTCCTCGCAGCCCCAGCCGTCTTCAGAGTGTGCGGAGAAGGAGCCCGAGCCCGAGGGCCCCACTGCACCTGGGGAGGGCAGCACGGTGGAGAGCCTGCCGAGGCCGCTCAGCCCCACCAAGCTCACCCCCATCGTGCACTCACCGCTGCGCTACCAGAGCGACGCCGACCTGGAGGCCCTGCGCAGGAAGCTGGCCAACGCACCCCGGCCCCTCAAGAAGCGCAGCTCCATCACGGAGCCTGAGGGCCCTGGCGGGCCCAACATCCAGAAGCTGCTGTACCAGCGCTTCAACACGCTGGCTGGGGGCATGGAGGGCACACCGTTCTACCAGCCCAGCCCCTCCCAGGACTTCGTGGGCACCTTGGCCGACATGGACAATGGAAATACCAATGCCAACGGCAACCTGGACGAGCCCAGCCCTGCCCAGCCCACAGGCCCACTGCTCAGCGAGCCCATCCCCTCCTCAGATGCCAACGATAATGAGCTGCCTTCCCCCGAGCCGGAGGAGCTCATCTGCCCACAAACTACCCACCAGACTGCGGAGCCCACAGAGGACAATAACAACAATGTTGCCCCGGTGCCCTCCACAGAGCAGATCGGCAGCCCGGTGGCTGAGCCTCCATCGCCAGTGGAAGAGCAAGTCCCTCCAGCAGCTCTGGCCCCTGTCCTGCACCCTCCGGCAGCCTCTGCGAGTAAACGAACCAACCTGAAGAAGCCCAACTCGGAGCGGACAGGGCACGGGCTGAGAGTGCGCTTCAATCCCCTGGCGCTGCTTCTAGACGCGTCCTTGGAAGGCGAGTTTGACCTGGTGCAAAGGATCATCTATGAGGTGGAGGACCCCAGCAAGCCCAACGACGAGGGCATCACCCCGCTGCACAACGCCGTCTGTGCCGGCCACCATCACATCGTGAAGTTCCTGCTGGACTTCGGCGTCAACGTGAACGCTGCTGACAGCGACGGGTGGACCCCACTGCACTGTGCTGCCTCCTGCAACAGTGTTCACCTCTGCAAGCAGCTGGTGGAGAGCGGCGCGGCCATCTTTGCCTCGACCATCAGCGACATCGAGACCGCTGCCGACAAGTGTGAGGAGATGGAAGAGGGCTACATCCAGTGCTCGCAGTTTCTGTACGGGGTGCAGGAGAAGCTGGGAGTGATGAACAAAGGGGTGGTATATGCCCTGTGGGACTATGAGGCCCAGAACAGCGACGAGCTGACCTTCCATGAAGGCGACGCCATCACCATCCTGAGGCGCAAGGACGAAAGCGAGACTGAGTGGTGGTGGGCTCGCCTCGGGGACCGGGAGGGCTACGTGCCCAAAAACCTGCTGGGGTTGTATCCACGGATCAAGCCCCGGCAGCGAACGCTGGCCTGA

Related Sequences

XP_004836938.1 Protein

Ppp1r13b PREDICTED: apoptosis-stimulating of p53 protein 1 isoform X2 [Heterocephalus glaber]

Length: 1120 aa      View alignments
>XP_004836938.1
MMPMILTVFLSNNEQILTDVPITPETTCRDVVEFCKEPGEGGCHLAEVWRGNERPIPFEHMMYEHLQKWGPRREEVKFFLRHEDSPTESSEQGGRQTQEQRTQRNVINVPVERRTENGVGNPRVELTLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKLKKIRAMRGQLDYSKVMNGSLSAEIERFSAMFQEKKQEVQTAILRVDQLSQQLEDLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEVAMMDKRISELRERLYGKKIQLNRVNGTSSPQSPLSTSSRVAAVGPYIQVPSGGSHPVPGDPVKPQSLTVASSAAHGRSKSDGHSRRRVTSMWTVSDLDVGPDYGPAQQSASPLVNSNDGNWPTLKPNSGSSGKPAQMASTDWKESGVEGALKQGAISSQPLPLSALGTTEKLGIEIGKGPPPMPGIGKPLPPSYGTYPSPTPQGPGSTSSLERRKDSSLPRPGAGLPSRQKPALLPPAASTPQPGSSQQIQQRISVPPSPTYPPAGPPSFPPGDGKPELPLTVAIRPFLADKGSRPQSPRKGPQTVNSSSIYSMYLQQATPPKNYQPAVHGTLNKSVKAVYGKPVLASGSTSPSPLPFLHGSSQPQPSSECAEKEPEPEGPTAPGEGSTVESLPRPLSPTKLTPIVHSPLRYQSDADLEALRRKLANAPRPLKKRSSITEPEGPGGPNIQKLLYQRFNTLAGGMEGTPFYQPSPSQDFVGTLADMDNGNTNANGNLDEPSPAQPTGPLLSEPIPSSDANDNELPSPEPEELICPQTTHQTAEPTEDNNNNVAPVPSTEQIGSPVAEPPSPVEEQVPPAALAPVLHPPAASASKRTNLKKPNSERTGHGLRVRFNPLALLLDASLEGEFDLVQRIIYEVEDPSKPNDEGITPLHNAVCAGHHHIVKFLLDFGVNVNAADSDGWTPLHCAASCNSVHLCKQLVESGAAIFASTISDIETAADKCEEMEEGYIQCSQFLYGVQEKLGVMNKGVVYALWDYEAQNSDELTFHEGDAITILRRKDESETEWWWARLGDREGYVPKNLLGLYPRIKPRQRTLA