Details from NCBI annotation

Gene Symbol Brf1
Gene Name BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit, transcript variant X1
Entrez Gene ID 101723395

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

BRF1 ENSCPOG00000000067 (Guinea pig)

Gene Details

BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000059, Guinea pig)

Protein Percentage 93.94%
CDS Percentage 90.79%
Ka/Ks Ratio 0.07141 (Ka = 0.0281, Ks = 0.3929)

BRF1 ENSG00000185024 (Human)

Gene Details

BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000448323, Human)

Protein Percentage 87.89%
CDS Percentage 84.44%
Ka/Ks Ratio 0.07014 (Ka = 0.0628, Ks = 0.895)

Brf1 ENSMUSG00000011158 (Mouse)

Gene Details

BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000011302, Mouse)

Protein Percentage 88.17%
CDS Percentage 83.68%
Ka/Ks Ratio 0.07794 (Ka = 0.0661, Ks = 0.8482)

Brf1 ENSRNOG00000014595 (Rat)

Gene Details

BRF1, RNA polymerase III transcription initiation factor 90 subunit (Brf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019689, Rat)

Protein Percentage 81.51%
CDS Percentage 79.49%
Ka/Ks Ratio 0.12255 (Ka = 0.1184, Ks = 0.9664)

Genome Location

Sequence Coding sequence

Length: 2034 bp    Location: 213537..280797   Strand: +
>XM_004836828.1
ATGATGGGCCGAGTGTGCCGCGCTTGCGGCGGCACCGACATCGAGCTGGACGCGGCGCGCGGCGATGCGGTGTGCACGGCCTGCGGCTCGGTGCTGGAGGACAACATCATTGTGTCCGAAGTGCAGTTCGTGGAGAACAGTGGCGGCGGCTCGTCGGCCGTGGGCCAGTTCGTGTCGCTGGACGGTCCTGGCAAAACCCCAACCCTGGGCAGCGGCTTCCATGTGAACCTGGGAAAAGAGTCAAGAGCACAGACCCTGCAGAATGGAAGGCGCCATATCCACCACCTAGGGAGCCAGCTGCAGCTGAACCAGCACTGCCTTGACACCGCCTTCATCTTCTTCAAGATGGCTGCAAACAAGAGCCTTACCCGGGGCCGCAAGATGGCCCACGTGATCGCCGCCTGCCTCTACCTGGTGTGCCGCACAGAAGGCACGCCGCACATGCTCCTCGACCTCAGTGACCTGCTTCAGGTGAACGTGTATGTGTTGGGGAAGACATTTCTGCTCCTAGCACGGGAGCTCTGCATCAACGCACCAGCTATAGACCCGTGCCTCTACATCCCACGCTTTGCCCACCTGCTGGAGTTTGGCGAGAAGAACCATGAGGTGTCGATGACGGCCCTGAGGCTGCTGCAGCGGATGAAGAGAGACTGGATGCACACGGGCCGGCGGCCTTCGGGCCTCTGTGGAGCAGCCCTTCTGGTTGCAGCCAGGATGCATGATTTCCGGAGAACTGTCAAAGAAGTCATCAGTGTGGTCAAAGTGTGCGAATCCACTCTTCGGAAAAGGCTCACAGAATTTGAAGACACCCCCACCAGCCAGCTGACCATCGACGAGTTCATGAAAATTGACCTGGAGGAGGAGTGTGACCCCCCCTCATACACAGCTGGACAGAGGAAACTGCGGATGAAGCAGCTTGAACAGGTCCTGTCAAAACAACTGGAGGAAGTTGAAGGTGAAATATCCAGTTACCAGGATGCCATTGAGAATGAACTGGAGAATAGCCGACCAAAGGCCAGGGGAGCTCTTGCCAACTTTTCGAAAGATGGCTTGATTGAGGATACCACATCCAGTGTCTTCGGTGAGGAGGACGCTGAGGACGAGGAGCTGGAGGCAGCTGCCAGCCACATGAACAAGGACTTTTACCGGGAGCTTCTGGGTGGAGGCAGCGGCAGCTCGGATGCAGTAGAGAGTCCCGAGGAGGGCGGCCAGCCATTGGCCCTGGAGTCCCTGCTCGGCCCCCTGCCCACGGCAGCCAGCTTGGGCATCTCGGACTCCATCCGTGAATGCATCTCGTCCCCAAGCCGGGACCCCAAAGACACCTCGGGGGACGGTGAGCTGGACCTCAGTGGCATCGACGACCTAGAAATCGACAGATATATCCTGAATGAGGCAGAAGCCCGGGTGAAGGCCGAGCTGTGGATGCGGGAGAATGCTGAGTACCTGCGAGAGCAGAGGGAGAAAGAAGCGAGGATAGCGAAGGAGAAGGAGCTGGGGATCTACAAGGAGCACAAGCCCAAGAAGTCTTGCAAGCGCCGAGAGCCCATCCAGGCCAGCAGTGCCAGGGAGGCCATCGAGAAGATGTTGGAGCAGAAGAAAATCTCCAGCAAGATCAACTATAGTGTGCTTCGAGACCTCAACAGCAAGGGTCCAGGCAGCTCCCAGAGGGACGACAAGCAGCCAGCCGAGAAGGGCAGCACCAGGAAGCTGTCATGGAGGAGAGTGGCAGCCAGCAGGAGCGGGGCTGAGCCTGGGACCAGTGTGGGGAAGAGGTTGAGGCCTCTGGTGTCTACACAGCCAGCTAAGAAAGCAGCCATGGGAGAGGCTGCATTCCCGAGCTTCCCAGCTATGGGAGCTGAGCTGGCCAGGCCAGCAGTGGTACTGGTGGAGAGCGGCCCAGTGTCCTACCACCCCGAGGAGGTGGCCGATGAGGACGATGCAGATGAGGATGATGGGGAGCCCTGTATCAGTGCCCTGAAGATGCTCGGCAGCAACGCTTACGGCTATGATGGTGATGATGATGATGGCTACTGA

Related Sequences

XP_004836885.1 Protein

Brf1 PREDICTED: transcription factor IIIB 90 kDa subunit isoform X1 [Heterocephalus glaber]

Length: 677 aa      View alignments
>XP_004836885.1
MMGRVCRACGGTDIELDAARGDAVCTACGSVLEDNIIVSEVQFVENSGGGSSAVGQFVSLDGPGKTPTLGSGFHVNLGKESRAQTLQNGRRHIHHLGSQLQLNQHCLDTAFIFFKMAANKSLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRMKQLEQVLSKQLEEVEGEISSYQDAIENELENSRPKARGALANFSKDGLIEDTTSSVFGEEDAEDEELEAAASHMNKDFYRELLGGGSGSSDAVESPEEGGQPLALESLLGPLPTAASLGISDSIRECISSPSRDPKDTSGDGELDLSGIDDLEIDRYILNEAEARVKAELWMRENAEYLREQREKEARIAKEKELGIYKEHKPKKSCKRREPIQASSAREAIEKMLEQKKISSKINYSVLRDLNSKGPGSSQRDDKQPAEKGSTRKLSWRRVAASRSGAEPGTSVGKRLRPLVSTQPAKKAAMGEAAFPSFPAMGAELARPAVVLVESGPVSYHPEEVADEDDADEDDGEPCISALKMLGSNAYGYDGDDDDGY