Sequence details NCBI ID: XM_004836826.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pacs2
Gene Name phosphofurin acidic cluster sorting protein 2, transcript variant X2
Entrez Gene ID 101722600

Database interlinks

Part of NW_004624734.1 (Scaffold)

For more information consult the page for NW_004624734.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PACS2 ENSCPOG00000005656 (Guinea pig)

Gene Details

phosphofurin acidic cluster sorting protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005099, Guinea pig)

Protein Percentage 96.74%
CDS Percentage 92.46%
Ka/Ks Ratio 0.05364 (Ka = 0.0187, Ks = 0.3492)

PACS2 ENSG00000179364 (Human)

Gene Details

phosphofurin acidic cluster sorting protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000399732, Human)

Protein Percentage 93.93%
CDS Percentage 89.58%
Ka/Ks Ratio 0.03838 (Ka = 0.0282, Ks = 0.7347)

Pacs2 ENSMUSG00000021143 (Mouse)

Gene Details

phosphofurin acidic cluster sorting protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000081953, Mouse)

Protein Percentage 95.39%
CDS Percentage 89.13%
Ka/Ks Ratio 0.03205 (Ka = 0.0211, Ks = 0.6589)

Pacs2 ENSRNOG00000014744 (Rat)

Gene Details

Protein Pacs2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053720, Rat)

Protein Percentage 95.95%
CDS Percentage 89.28%
Ka/Ks Ratio 0.02787 (Ka = 0.0184, Ks = 0.6595)

Genome Location

Sequence Coding sequence

Length: 2670 bp    Location: 184664..125927   Strand: -
Raw sequence   
>XM_004836826.1
ATGGCCGAGCGGGGCCGCCTCGGCCTCCCCGGCGCGCCGGGCGCGCTCAACACGCCGGTGCCCATGAACCTGTTCGCCACCTGGGAGGTGGACGGCTCCAGCCCCAGCTGTGTGCCCAGGTTGTGCAGCTTGACCGTGAAGAAGCTGGCAGTTCTCAGGGAGCTGGAGAAGGAGCTGATGTCTGTGGTGATTGCAGTCAAGATGCAGGGCTCCAAACGAGTCCTGCGGTCTCATGAGATTGTGCTGCCCCCCAGTGGACAAGTGGAGACTGACCTGGCCCTGACCTTCTCGCTGCAGTACCCTCACTTCTTGAAGAGAGAAGGCAACAAGCTTCAGATCATGCTGCAGCGCAGAAAGCGGTACAAAAACCGGACGATCCTGGGCTATAAGACGCTGGCCGTGGGCTCCATCAACATGGCCGAGGTGATGCAGCACCCCTCAGAGGGTGGCCAGGTGCTGAGCCTCTGCAGCAGCATCAAGGAGGCCTCTGTCAAGGTGGCAGAGATCTGGATCATCTCCCTGTCCAGCCAGCCCATCGACCATGAGGACAGTGCCATGCAGGCCGGTCCCAAGGCCAAGTCCACAGATAACTACTCTGAGGAGGAGTATGAGAGCTTCTCCTCTGAGCAGGAGGCCAGCGATGATGCTGTGCAAGGGCAGGATCTAGACGAGGACGACTTTGATGTGGGGAAACCTGAGAAGCAGCGGAGATCGATAGTAAGAACGACGTCCATGACCAGGCAACAGAACTTCAAGCAGAAGGTGGTGGCCCTGCTGCGGAGGTTCAAAGTGTCAGACGAGGTCCTGGACTCGGAACAGGACCCTGCAGAGCACGTCCCTGAGGCAGAGGAGGACCTGGACCTTCTGTATGACACACTGGACATGGAGAACCCCAGTGACAGCGGTCCTGACATGGAGGATGATGACAGCGTCCTTAGCACCCCCAAGCCCAAGCTCAGGCCGTACTTTGAGGGCCTGTCACACTCCAGCTCACAGACAGAGATCGGGAGCATCCATAGTGCCCGAAGCCACAAGGAGCCTCCAAGCCCGGCAGACATGCCTGAGAAGACGCGGTGCCTGGGAGCCAAGCAGCCAAGTGACAGCATCTCGGACACGGTAGCCCTGAGCATACCGGTCCCTCAGGAGCTGGCAGAGCCCCCCGAGAACAGTCCGGAGGCTGAGACCTCCGCTCTGGATGTGTTTACCGAGAAGCTGCCACCCAGTGGGAGGATCACCAAGACGGAGTCGCTCGTCATCTCATCCACAAGGTCTGAGGCAAAGCCAGCTGGCCGCCGGGGCCGGAGCACATCCCTGAAGGAGCGGCAGCCAGCACGGCCACAGAATGAGCGGGCCAACAGCCTGGACAATGAGCGGTGCCCAGACACAAGGAGCCAGCTGCAGATCCCCAGGAAGACCGTGTATGACCAGCTGAACCATATCCTCATCTCCGATGACCAGCTCCCTGAGAATATCATTCTTGTCAATACCTCTGACTGGCAGGGGCAGTTCCTTTCTGATGTCCTACAAAGGCACACACTCCCTGTGGTGTGCACATGCTCTGCTGCTGATGTCCAGGCAGCCTTCAGCACCATCGTCTCACGGATACAGAGATACTGCAACTGCAATTCCCAGCCCCCGACCCCAGTGAAGATTGCAGTGGCCGGAGCACAGCATTACCTCAGCGCCATCCTGAGGCTCTTCGTGGAGCAGCTGTCCCACAAGACGCCTGACTGGCTCGGCTATATGCGCTTTCTCATCATCCCGCTGGGTTCCCACCCCGTGGCCAGGTACCTGGGCTCCGTGGACTACCGCTACCACAACTTCTTCCAGGACCTGGCCTGGAGAGACCTGTTCAACAAGCTGGAGGCCCAGAGTATAGTGCAGGACACACCGGACATCGTTTCACGCATCACCCAGTACATCGCAGGGGCCAACTGTGCCCACCAGCTTCCCATTGCTGAGGCCATGCTGACCTACAAGCAGAAGAGCCCTGATGAAGAGTCCTCCCAGAGGTTCATTCCTTTTGTTGGGGTTGTGAAGGTTGGGATCGTGGAACCTTCATCTGCCACATCAGGTGACTCAGATGATGCAACCCCCTCGGGCCCCAGTGTGCTCTCCTCCACCCCACCATCCACGTCGCCCGCAGCCAAGGAGGCCTCACCCACCCCACCGTCCTCCCCATCGGTGAGCGGAGGCCTATCCTCCCCCAGCCAGGGTGTCGGCGCCGAACTCATGGGGCTACAGGTGGACTACTGGACAGCAGCACCTCCTGCAGACAGGAAGAGGGATGCCGAGAAGAAAGACCTGCTCACCACCAAAAACACGCTCAAGTGCACTTTCCGGTCCCTCCAGGTCAGCAGGCTGCCCAGCAGTGGCGAGGCCACAGCCACGCCTACCATGTCCATGACCGTGGTCACCAAGGAGAAGAACAAGAAGGTGATGTTTTTGCCCAAGAAAACAAAAGACAAAGATGTGGAATCCAAGAGCCAGTGCATCGAGGGCATCAGCCGCCTGATCTGCACAGCCAAGCACCAGCAGAACATGCTGCGGGTCCTCATCGACGGCGTGGAGTGCAGTGATGTCAAGTTCTTCCAGCTGGCCGCCCAGTGGTCCTCGCATGTGAAGCACTTCCCCATCTGCATCTTCGGACACTCCAAGGCCACCTTCTAG

Related Sequences

XP_004836883.1 Protein

Pacs2 PREDICTED: phosphofurin acidic cluster sorting protein 2 isoform X2 [Heterocephalus glaber]

Length: 889 aa      View alignments
>XP_004836883.1
MAERGRLGLPGAPGALNTPVPMNLFATWEVDGSSPSCVPRLCSLTVKKLAVLRELEKELMSVVIAVKMQGSKRVLRSHEIVLPPSGQVETDLALTFSLQYPHFLKREGNKLQIMLQRRKRYKNRTILGYKTLAVGSINMAEVMQHPSEGGQVLSLCSSIKEASVKVAEIWIISLSSQPIDHEDSAMQAGPKAKSTDNYSEEEYESFSSEQEASDDAVQGQDLDEDDFDVGKPEKQRRSIVRTTSMTRQQNFKQKVVALLRRFKVSDEVLDSEQDPAEHVPEAEEDLDLLYDTLDMENPSDSGPDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADMPEKTRCLGAKQPSDSISDTVALSIPVPQELAEPPENSPEAETSALDVFTEKLPPSGRITKTESLVISSTRSEAKPAGRRGRSTSLKERQPARPQNERANSLDNERCPDTRSQLQIPRKTVYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSAADVQAAFSTIVSRIQRYCNCNSQPPTPVKIAVAGAQHYLSAILRLFVEQLSHKTPDWLGYMRFLIIPLGSHPVARYLGSVDYRYHNFFQDLAWRDLFNKLEAQSIVQDTPDIVSRITQYIAGANCAHQLPIAEAMLTYKQKSPDEESSQRFIPFVGVVKVGIVEPSSATSGDSDDATPSGPSVLSSTPPSTSPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAPPADRKRDAEKKDLLTTKNTLKCTFRSLQVSRLPSSGEATATPTMSMTVVTKEKNKKVMFLPKKTKDKDVESKSQCIEGISRLICTAKHQQNMLRVLIDGVECSDVKFFQLAAQWSSHVKHFPICIFGHSKATF