Details from NCBI annotation

Gene Symbol Col23a1
Gene Name collagen, type XXIII, alpha 1
Entrez Gene ID 101708942

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COL23A1 ENSCPOG00000021594 (Guinea pig)

Gene Details

collagen, type XXIII, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018812, Guinea pig)

Protein Percentage 88.97%
CDS Percentage 85.36%
Ka/Ks Ratio 0.18801 (Ka = 0.077, Ks = 0.4098)

COL23A1 ENSG00000050767 (Human)

Gene Details

collagen, type XXIII, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000375069, Human)

Protein Percentage 88.06%
CDS Percentage 84.89%
Ka/Ks Ratio 0.19393 (Ka = 0.0822, Ks = 0.4239)

Col23a1 ENSMUSG00000063564 (Mouse)

Gene Details

collagen, type XXIII, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099826, Mouse)

Protein Percentage 86.91%
CDS Percentage 82.73%
Ka/Ks Ratio 0.18674 (Ka = 0.0952, Ks = 0.5099)

Genome Location

Sequence Coding sequence

Length: 2142 bp    Location: 41700873..41427779   Strand: -
>XM_004836789.1
ATGCTTTTCCCGACGCCGCCTGTGGGCCGCCCGGTCCGCAGCGCGAGCTGGGGTCGGTTGCTGTTCCCTGGACGCGCGCTAGGCCCATTCCAGGGCCCCGCTGTCTCCCCGGCGCGGGCCGCGCCCGGCCAGGAGGACGCGCAGCTCGCCTGTCAGCGACCCGCAGGGAATTTGGGCTCTGCGAGGTCCGTGGGGCTCCGCTCTGTCTACCCGCGCGGGGCGGAAGGCTCGCTCTCGGCCGCCAGGCGGCGCTGCGCGCCCACCGAGGCCGGACCGCTTTGCCCGGCGCACGAGGCGCCGAACTTCTGCTGCGGTGAGCGCCGAAGTGGAGCCCCGCGTCTGCGCACGGCCCCGGCCCGAAAGCGCCCCGCCGCGGCGGCTCTCGGGCACCTCCCGCCCGCGCGCCCCTCCCCGGGGTGGGCCTCGCGTCCGCTCGGGCGGAGCCAGCGGCTCAGAGGAAACCGCCCGTCCGCGGTGGCCCGAGCAGCTGCCGGCGAGGGGCGTGCGCTGCTGCCTCCGCGCCTCGGAGGCCCGCACGGCAGAGCCATGGGTCCCGGCGAGCGCCCCGGCCCCAGCCCGGCGCGGAGCAGCGGCCCCGCGGGCCCCGCGAGCACGGCCGGCCGGGCGGCGAGCGCGCTGTGCCTGCTGCTCTCCGTGGGCTCGGCCGCCGCCTGCCTGCTGCTCGGCGCGCAGGGAGCCGCGCTGAGGGCGCGGGTGGCGGCGCTGGAGGACGAGCGGGAGCTGCTGCGGCGAGGGGCGCTGGCCGCCTGGGCCGGGCCGCACCTGGAGCGCCTGCTGCGGGAGAAGCTGGACGGACTCGCCAAGCTCCGGACTGCTCGGGAAGCCCCGTCGGAGTGTGTCTGTCCACCAGGCCCCCCTGGAAGGCGTGGCAAGCCTGGAAGAAGAGGCGACCCCGGTCCTCCAGGACAATCAGGACGAGATGGCTACCCGGGACCACTTGGTCTGGATGGCAAACCCGGACTTCCAGGCCCCAAAGGGGAAAAGGGTGCGCCAGGAGACTTCGGCCCCTGGGGGGAACAAGGGCAAGATGGAGCTGCAGGGCCTCCAGGGCCACCTGGGCCGCCTGGGGCCCGGGGCCCTCCTGGTGACACTGGGAAAGACGGCCCCCGAGGAGCTCAAGGCCCGGCGGGTCCCAAGGGAGCGCCTGGGCAGCACGGCGAGACGGGCCCCAAGGGAGCCCCAGGGCCCAAGGGCTGGGCCGGAGCTCCGGGATACAGAGGGGAGGACGGGATGCCCAGCCAGCCAGGGCTCCCCGGGCCCCCAGGCCCCAAGGGCGAGCCAGGGAGTGCGGGGCCCCAAGGACAGAGCGGCATGGACGGCGCCCCAGGCCCGAAGGGGGAGCCCGGCCCTAGAGGCACCGATGGAGCCGCGGGGCCCCGGGGTCCCCCGGGCCTCAAGGGCGAGCAGGGAGACACAGTGGTGATCGACTACGACGGCAGGATCTTGGATGCCCTGAAGGGTCCCCCCGGGGCGCAGGGAGCCCCAGGGCCACCAGGGATCCCCGGAGCCAAGGGTGAGCTCGGGTTGCCGGGTGCCCCAGGAATCGATGGAGAGAAGGGTCCCAAAGGGCAGAAAGGAGACCCAGGAGAGCCCGGGCCGGCGGGGCCCAAAGGGGAAGCAGGCGAGGTGGGCTTGTCCGGCCTGCCGGGCGCTGATGGCCCCAAGGGAGAGAAGGGAGACTCGGCATCTGAGAGCCTGCAGGAGAGCCTGGCCCAGATCATAGCGGAACCAGGGCCCCCCGGGCCCCCCGGCCCCCCGGTAAGGACGGGCCTCCCGGGAATCCAGGGCCCCAAGGGCCTGGACGGAGCAAAGGGAGAGAAAGGCGCATCAGGCGAGAGAGGCCCTAGCGGCCTGCCAGGGCCAGTCGGCCCGCCGGGCCTTATTGGGCTGCCAGGAACCAAAGGAGAGAAGGGCAGACCCGGGGAGCCAGGACTCGATGGCTTCCCTGGTGCCCGAGGTGAGAAAGGCGACCGGAGTGAGCGTGGAGAGAAGGGGGAGCGAGGTGTCCCCGGCCGGAAAGGCGTGAAGGGCCAGAAGGGAGAGCCAGGGCCGCCAGGCCTGGACCAGCCGTGCCCTGTGGGACAAGATGGGCTGCCCGTGCCTGGCTGCTGGCATAAGTGA

Related Sequences

XP_004836846.1 Protein

Col23a1 PREDICTED: collagen alpha-1(XXIII) chain [Heterocephalus glaber]

Length: 713 aa     
>XP_004836846.1
MLFPTPPVGRPVRSASWGRLLFPGRALGPFQGPAVSPARAAPGQEDAQLACQRPAGNLGSARSVGLRSVYPRGAEGSLSAARRRCAPTEAGPLCPAHEAPNFCCGERRSGAPRLRTAPARKRPAAAALGHLPPARPSPGWASRPLGRSQRLRGNRPSAVARAAAGEGRALLPPRLGGPHGRAMGPGERPGPSPARSSGPAGPASTAGRAASALCLLLSVGSAAACLLLGAQGAALRARVAALEDERELLRRGALAAWAGPHLERLLREKLDGLAKLRTAREAPSECVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPWGEQGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGAPGQHGETGPKGAPGPKGWAGAPGYRGEDGMPSQPGLPGPPGPKGEPGSAGPQGQSGMDGAPGPKGEPGPRGTDGAAGPRGPPGLKGEQGDTVVIDYDGRILDALKGPPGAQGAPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEPGPAGPKGEAGEVGLSGLPGADGPKGEKGDSASESLQESLAQIIAEPGPPGPPGPPVRTGLPGIQGPKGLDGAKGEKGASGERGPSGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGARGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGQDGLPVPGCWHK