Details from NCBI annotation

Gene Symbol Tnip1
Gene Name TNFAIP3 interacting protein 1, transcript variant X2
Entrez Gene ID 101701889

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNIP1 ENSCPOG00000006613 (Guinea pig)

Gene Details

TNFAIP3 interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005956, Guinea pig)

Protein Percentage 87.34%
CDS Percentage 88.08%
Ka/Ks Ratio 0.1292 (Ka = 0.065, Ks = 0.5031)

TNIP1 ENSG00000145901 (Human)

Gene Details

TNFAIP3 interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000374029, Human)

Protein Percentage 86.03%
CDS Percentage 86.3%
Ka/Ks Ratio 0.14051 (Ka = 0.0797, Ks = 0.567)

Tnip1 ENSMUSG00000020400 (Mouse)

Gene Details

TNFAIP3 interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099792, Mouse)

Protein Percentage 82.73%
CDS Percentage 82.99%
Ka/Ks Ratio 0.11108 (Ka = 0.0955, Ks = 0.8602)

Tnip1 ENSRNOG00000010370 (Rat)

Gene Details

TNFAIP3 interacting protein 1 (Tnip1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013864, Rat)

Protein Percentage 81.14%
CDS Percentage 81.99%
Ka/Ks Ratio 0.11885 (Ka = 0.1061, Ks = 0.8925)

Genome Location

Sequence Coding sequence

Length: 1899 bp    Location: 41006360..40964020   Strand: -
>XM_004836656.1
ATGGAAGGGAGAGGACCCTACCGGATCTACGACCCCGGGGGCAGCACACCTCCAGGAGAGGCATCTGCAGCTTTTGTACGCCTAGTGGAGGAGAATTCACGGCTGAAGGAAAAAATGCAAGGGATAAAGATGTTAGGGGAGCTTTTGGAAGAATCCCAGATGGAGGCATCCAGGCTCCGGCAGAAGGCTGAGGAGCTCGTCAAGGACAGTGAGCTGCCACCTGCTCCTTCCTTGGGCTCCTTTGACCACCTGGCTGAGTTCACAGGGAAGGACACAAATGTCCCAGCACCACCCAGTGCTCCTGCACCCCCGAGCGACAAGTCCGCACCAGTCCCAAAACCTCCATCCAGCGGCACATCCTCGGAATTTGAAGTGGTCCCCACCGAGGAGCAGCATTCTCCACCGGAAAGCAGCAGCCTCCCCAGAAACTCCATGGAACCGCGCCCCCTGCCCCGAGAGGACAGCAACCTGATGCAGCACCTGCAGCGCCTGGAGACCACCCTGAGCGTGTGCGCCGAGGAGCCAGACCAGCGGCAGCTCTTCACGCACCTGGGCCGCATGGCCCTGGAGTTCAACCGGCTGGCCTCCAAGGTGCACAGGAACGAGCAGCGCACCTCCATCCTGCAGACCCTGTGTGAGCAGCTTCGGAAAGAGAATGAGGCCCTGAAGGCCAAGCTGGACAAGGGCCTGGAGCAGCGGGATCAGGCTGCGGAGAGGCTGCGGGAGGAAAATATGGAGCTCAAGAAGTTGTTGATGAGCGGCAGCAGCAAAGAGGGGACCTGCGGGCAGCCAGGCTCGCCAAAGCTGGAGAGTGCTGGCAAGCAGGGGGTGGCCGGACAGCAGCAGGCTGGAGTGCTGGCGGGCAAGGGCCCAGGGGTGGCCGCCCCAGGTGCGGCTGAGAAGAAGGTGAAGATGCTGGAGCAGCAGCGCATGGAGCTGCTGGAGGTGAACAAGCAGTGGGACCAGCACTTCCGCTCCATGAAGCAACAGTATGAGCAGAAGATCACCGAGCTGCGCCAGAAGCTGGGGGACCTGCAGAAGCAGGTGGCAGACCTGGAGGCCGAGCGGGAACAGAAGCAGCGTGACTTTGACCGAAAGCTCCTGCTGGCCAAGTCCAAGATTGAAATGGAGGAGACCGACAAAGAGCAGCTGACTGCGGAGGCCAAGGAGCTGCGCCAGAAGGTCAAGCACCTGCAGGACCAGCTGAGCCCCCTCACCCGGCAGCGCGAGTACCAGGAGAAGGAGATCCAGCGGCTCAACAAGGCCCTGGAGGAAGCACTGAGCATCTGCACCTCCCCATCATCCCCAGCAGCGTTCGGGAGCCCAGAAGGGGCCGGCAGCCTCCTAAGGAAGCAGGAGCTGGCCACACAGAATGAGTTGCTGAAGCAGCAGGTGAAGATCTTTGAGGAGGACTTCCAGAGGGAGCGCAGTGACCGGGAGCGCATGAACGAGGAGAAGGAGGAGCTGAAGAAGCAGGTGGAGAAGCTGCAGGCCCAGGTCACCTTGTCAAACACCCAGCTGAAAGCATTGAAAGAGGAGGAGAAGGCAAAAGAAGCCCTGAGACAGCAGAAGAGGAAAGCCAAGGCCTCGGGAGAGCGCTACCATGCGGAGCCCCACGCAGAGCACATCTGCGGGGCCTACCCCTATGCCTACCCGCCCATGCCAGCCATGGTGCCGCATCACGGCTACGAGGACTGGTCCCAGATCCGCTACCCCCCGCCCCCCATGGGCATGGACCACCCGCCCCCGATCCCAGGCTCACGCCTCTACCATCTGCCAGAGTACACCTGGCGCCCACCCTGTGGCAGTGTGCGGAATCAGAGCTCCCAAGTGATCGACGTGTCTGCAGCCCGGCCCACAGAACCAGAGCTGGCTGACCTCAGATTACCGAAAAGCTAG

Related Sequences

XP_004836713.1 Protein

Tnip1 PREDICTED: TNFAIP3-interacting protein 1 isoform X2 [Heterocephalus glaber]

Length: 632 aa      View alignments
>XP_004836713.1
MEGRGPYRIYDPGGSTPPGEASAAFVRLVEENSRLKEKMQGIKMLGELLEESQMEASRLRQKAEELVKDSELPPAPSLGSFDHLAEFTGKDTNVPAPPSAPAPPSDKSAPVPKPPSSGTSSEFEVVPTEEQHSPPESSSLPRNSMEPRPLPREDSNLMQHLQRLETTLSVCAEEPDQRQLFTHLGRMALEFNRLASKVHRNEQRTSILQTLCEQLRKENEALKAKLDKGLEQRDQAAERLREENMELKKLLMSGSSKEGTCGQPGSPKLESAGKQGVAGQQQAGVLAGKGPGVAAPGAAEKKVKMLEQQRMELLEVNKQWDQHFRSMKQQYEQKITELRQKLGDLQKQVADLEAEREQKQRDFDRKLLLAKSKIEMEETDKEQLTAEAKELRQKVKHLQDQLSPLTRQREYQEKEIQRLNKALEEALSICTSPSSPAAFGSPEGAGSLLRKQELATQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQVEKLQAQVTLSNTQLKALKEEEKAKEALRQQKRKAKASGERYHAEPHAEHICGAYPYAYPPMPAMVPHHGYEDWSQIRYPPPPMGMDHPPPIPGSRLYHLPEYTWRPPCGSVRNQSSQVIDVSAARPTEPELADLRLPKS