Sequence details NCBI ID: XM_004836639.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rapgef6
Gene Name Rap guanine nucleotide exchange factor (GEF) 6, transcript variant X2
Entrez Gene ID 101697165

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000010242 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009197, Guinea pig)

Protein Percentage 95.29%
CDS Percentage 93.69%
Ka/Ks Ratio 0.12045 (Ka = 0.0247, Ks = 0.2048)

Rapgef6 ENSMUSG00000037533 (Mouse)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099804, Mouse)

Protein Percentage 91.72%
CDS Percentage 88.0%
Ka/Ks Ratio 0.08633 (Ka = 0.0432, Ks = 0.5003)

Rapgef6 ENSRNOG00000009995 (Rat)

Gene Details

Rap guanine nucleotide exchange factor (GEF) 6 (Rapgef6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013481, Rat)

Protein Percentage 91.18%
CDS Percentage 87.53%
Ka/Ks Ratio 0.08945 (Ka = 0.046, Ks = 0.5146)

Genome Location

Sequence Coding sequence

Length: 4800 bp    Location: 40402318..40606445   Strand: +
Raw sequence   
>XM_004836639.1
ATGAACTCACCCGTAGACCCCGGCGCCCGGCAAGCGCTGAGGAAGAAGCCGCCGGAGCGGACGCCTGAGGATTTAAATACTATTTATTCTTATCTTCATGGAATGGAAATATTATCAAATCTCAGGGAACATCAGCTTAGATTAATGTCTGCAAGAGCACGCTATGAGAGATACAGTGGAAATCAAATTCTTTTTTGTTCAGAGACTATTGCCAGATGCTGGTATATCCTGCTTTCTGGATCTGTACTTGTGAAAGACTCCATGGTCCTACCTCCTTGCAGTTTTGGTAAGCAGTTTGGAGGAAAAAGAGGATGTGATTGTCTTGTATTAGAGCCTTCAGAAATGATTGTGGTAGAGAATTCTAAAGATAATGAAGATAGCATTCTGCAAAGAGAAATTCCTGCCAGACAGTCTCGACGAAGATTTCGAAAAATTAATTATAAAGGAGAACGCCAAACCATAACTGATGATGTGGACATCAGTAGCTATCTTTCTCTCCCAGCTGATCTTACCAAGATGCATCTCACAGACAGCCCTCATCCTCAGGTGACTCACGTGACTTCTAGTCAGTCTGGGTGCAGCATTGCCAGTGACTCTGGAAGCAGCAGTCTCTCTGATATCTATCAGGCTACAGAGAGTGAGGTAGGAGATGTAGATTTAACACGGCTTCCAGAAGGACCTGTTGATTCTGAGGATGAAGAAGAGGAAGAGGAAGAAATTGATCGAACAGATCCATTGCAGGGGCGAGATTTTGTTCGAGAATGTCTTGAAAAAGAACCTGCAGACAAAACAGATGATGACATTGAACAATTACTTGAGTTTATGCACCAGCTCCCTGCTTTTGCAAACATGACCATGTCAGTAAGGAGAGAGCTCTGCTCAGTGATGATTTTTGAAGTGGTGGAGCAAGCTGGAGCTGTTATTCTTGAAGATGGGCAAGAGCTTGACTCTTGGTATGTGATTTTGAACGGCACTGTAGAAATTAGTCATCCAGATGGAAAAGTTGAAAATCTCTTTATGGGAAATAGTTTTGGAATTACTCCCACTCTGGATAAGCAGTACATGCATGGAATTGTCAGGACTAAAGTAGATGATTGTCAGTTTGTGTGCATAGCCCAGCGGGATTATTGGAGAATTTTAAATCATGTGGAAAAAAATACCCATAAAGTTGAGGAAGAGGGAGAAATTGTTATGGTACATGAGCACCGGGAGTTAGACCGGAGTGGAACGAGGAAAGGACACATTGTAATCAAGGCAACACCTGAGCGTCTCATCATGCATTTAATAGAAGAACATTCTATTGTGGACCCAACTTATATAGAAGATTTTCTGTTGACTTACAGGACATTTCTTGAAAGTCCTTTGGATGTTGGAATCAAGCTATTAGAATGGTTTAAGATTGACAGTTTGAGAGATAAGGTGACACGGATTGTATTATTGTGGGTAAATAATCATTTTAATGATTTTGAAGGTGATCCTGCCATGACTCGATTTCTAGAGGAATTTGAAAAAAATCTGGAGGATACAAAAATGAATGGTCATCTCCGGCTGTTGAATATTGCCTGTGCTGCAAAGGCTAAGTGGAGACAAGTTGTGCTGCAAAAGACTTCCCGTGAGTCGCCTCTGCATTTCAGCCTCAGTGGAGGAAGTGAAAAGGGATTTGGTATTTTTGTTGAAGGAGTTGAACCTGGTAGCAAAGCTGCTGATGCAGGACTGAAACGTGGTGACCAGATAATGGAAGTAAATGGACAAAATTTTGAGAATATTACATTTGTGAAGGCTCTTGAAATTTTGAGGAATAATACTCATCTTGCACTTACTGTGAAGACCAACATTTTTGTGTTCAAAGAGTTACATAGTAGGACCAAACAAGAGAAATCTGGTGTTCCGCATATTCCAAAAATTGCTGAAAAAAAAAGTAACCGTCATTCAATCCAAGATGTACCAGGAGATACTGAACAGACATCACAGGAGAAAGGACATAAGAAAGTTAAAGCAAATACTGTTTCAGGTGGAAGAAACAAAATCAGGAAGATTTTGGATAAAACACGGTTTAGTATCTTGCCTCCAAAGCTATTTAGTGATGGAGGCCTGAGCCAGTCACAGGATGACAGCATTGTGGGAACGAGACATTGTAGACACAGCCTCGCTATAATGCCTATTCCTGGAACACTCTCATCCAGCAGCCCCGATCTCCTACAGCCAACCACCAGCATGTTGGACTTTTCCAACCCTTCAGATATTCCGGATCAAGTTATAAGAGTTTTCAAAGCAGATCAACAAAGTTGCTATATTATCATCAGTAAAGACACTACAGCTAAAGAAGTAGTTTGTCACGCCGTTCATGAATTTGGTTTGACTGGTGCATCTGACACATACTCTCTCTGTGAAGTTTCTGTTACTCCTGAGGGTGTCATAAAGCAGAGAAGACTTCCAGACCAGTTCTCCAAATTAGCTGACAGAATTCAGCTCAATGGAAGGTACTATTTGAAAAATAACATGGAAACAGAAACCTTATGCTCAGATGAAGATGCTCAGGAACTGGTTAAAGAAAGCCAACTGTCCATGCTGCAGCTCAGTACCATCGAGCTGGCCACCCAGTTGTCAATGCGGGACTTTGACTTATTTCGTAATATTGAGCCTACTGAATACATTGATGACATTTTTAAGTTGGACTCCAAAACAGGAAATACTCACTTGAAGGAGTTCGAGGACATTGTAAACCAAGAGACATTCTGGGTTGCCTCAGAGATTTTAACAGAATCAAATCCGCTCAAACGAATGAAAGTTATTAAACATTTTATTAAGATTGCACTTCATTGTCGAGAATGTAAGAATTTCAATTCCATGTTCGCAATTATAAGTGGCTTGAACCTGGCACCTGTAGCACGACTTAGAGGTACCTGGGAAAAGTTACCAAACAAATACGAGAAACATCTCCAAGATCTTCAAGACCTTTTTGATCCATCTAGAAACATGGCAAAATATAGAAATATTCTTAGTAGTCAAAGCATGCAGCCTCCAATTATTCCGCTCTTCCCCGTTGTCAAGAAAGATATGACTTTTCTTCATGAAGGAAATGACTCCAAAGTAGATGGTTTAGTAAACTTTGAGAAGCTAAGAATGATTTCTAAGGAAATCCGCCAAGTTGTTCGAATGACTTCTGCTAACATGGACCCAGCTATGATGTTCCGACAAAGGTCACTGAGTCAAGGCAGCACAAATTCAAACATGTTGGATGTTCAAGGAGGCGCTCACAAGAAAAGAGCGCGTCGCAGCTCTCTGCTCAATGCCAAGAAGCTGTATGAGGATGCGCAGATGGCAAGGAAGGTAAAGCAGTATCTGTGCAGTCTGGATGTAGAGACGGATGAGGAGAAGTTCCAGATAATGTCGCTGCAGTGGGAACCTGCCTATGGTACCTTGACCAAGAATTTAAATGAGAAAAGATCAGCCAAATCATCTGAAATGTCTCCAGTGCCTATGAGGTCAGCAAACCAGGTGGCTAAAGCCCACTTGCACCAGCCCCACAGAGTGAGCCAGGTGCTTCAAGTGCCCGCTGTTAATTTGCACCCTATAAGGAAGAAGGGACAAGCAAAAGACCCTGCCTTGAGTACAGGTTTACCTCAGAAAGTTTTAGGACCAACTGAAGAAGTAAGTGGTAAGAAACATACAGAAGACGTGATTTCTGTGGCGTCATCGTTACATTCTAGTCCTCCTGCATCTCCTCAAGGTTCCCCTCGCAAAGGTTACACACTTACACCATCAGCTAAATCTGACAACTTGTCTGACTCCAGCCACAGCGAGATTTCTTCACGGTCCAGCATCGTGAGCAACTGTTCTGTTGACTCCATGTCTGCAGCTCTGCAGGATGAGCGGTGTTGCTCCCAGTCCATGGCAGTCCCTGAACCCACTGGGACATTGGAAAAGACAGAGCACCCCCCGGGGACAGGAGACCACGGTCATCTTGGACCTGGGTGGACATTTTCAAAGCCATCTCTAATCAAGGGTTTACCTGTCTCGTCTTCTCTGAGCAATGAAGAGATTTCTCATGAGCATATTGTTATAGAAGCAGCTGACAGTGGTCGTGGAAGTTGGACTTCCTGTTCAAGCAACTCCCATGACAACTTCCAGAGCCTTCCAAACCCAAAAAGCTGGGACTTTCTGAACTCCTACAGACATACTCATTTGGATGAGTCCATTGCTGAAGTTGAATCCACCGATTGTGAGCCCTATTCCTGTCCTAAAGGTTGCTCTAGAACTTGTGGGCAGTGTAAAGGAAGCTTAGAGACCAGTCAGTTGAGACAGAGTTGGGCCTCCTCCAGTTCTCTGTCTGACACATATGAACCAAACTATGGGACAGTTAAAAGGAGAGTTTTGGAGGCCACCCCCGCCGAGTCATCGGATGGCTTGGACCCAGTTTATAAAACAGTCACTTCAAGTACAGAAAAGGGCTTGATCGTGTACTGTGTCACCTCACCCAAGAAGGATGGTAGGTATAGGGAGCCACCTCCTACTCCTCCAGGATACATGGGAATTTCTTTAGCCGACCTAAAGGAAGGACCCCACCCGCACCTAAAGCCTCCAGAGTATAGTGTGGCCGTGCAGAGGTCAAAGATGGTGCCCAGCAGCCTCTCTAGGCCGCCAGCCGCCTCTCCCAGTAGCAGCCCCGTGGCCTGCATCTCATCGAAGATTGTAACTCGGCCTCAGAGGCTTAATTTGCAGGCCTCCCACCCTAAACTAGCAGATGTGGCTGACCCAGAGAGCGAAGCAGATGAAAATGAACAAGTGTCAGCAGTCTAG

Related Sequences

XP_004836696.1 Protein

Rapgef6 PREDICTED: rap guanine nucleotide exchange factor 6 isoform X2 [Heterocephalus glaber]

Length: 1599 aa      
>XP_004836696.1
MNSPVDPGARQALRKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSGNQILFCSETIARCWYILLSGSVLVKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVENSKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDISSYLSLPADLTKMHLTDSPHPQVTHVTSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEEEEIDRTDPLQGRDFVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAVILEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCIAQRDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKATPERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGIKLLEWFKIDSLRDKVTRIVLLWVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKTSRESPLHFSLSGGSEKGFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRNNTHLALTVKTNIFVFKELHSRTKQEKSGVPHIPKIAEKKSNRHSIQDVPGDTEQTSQEKGHKKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMPIPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHAVHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLCSDEDAQELVKESQLSMLQLSTIELATQLSMRDFDLFRNIEPTEYIDDIFKLDSKTGNTHLKEFEDIVNQETFWVASEILTESNPLKRMKVIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLRGTWEKLPNKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDMTFLHEGNDSKVDGLVNFEKLRMISKEIRQVVRMTSANMDPAMMFRQRSLSQGSTNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLCSLDVETDEEKFQIMSLQWEPAYGTLTKNLNEKRSAKSSEMSPVPMRSANQVAKAHLHQPHRVSQVLQVPAVNLHPIRKKGQAKDPALSTGLPQKVLGPTEEVSGKKHTEDVISVASSLHSSPPASPQGSPRKGYTLTPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDERCCSQSMAVPEPTGTLEKTEHPPGTGDHGHLGPGWTFSKPSLIKGLPVSSSLSNEEISHEHIVIEAADSGRGSWTSCSSNSHDNFQSLPNPKSWDFLNSYRHTHLDESIAEVESTDCEPYSCPKGCSRTCGQCKGSLETSQLRQSWASSSSLSDTYEPNYGTVKRRVLEATPAESSDGLDPVYKTVTSSTEKGLIVYCVTSPKKDGRYREPPPTPPGYMGISLADLKEGPHPHLKPPEYSVAVQRSKMVPSSLSRPPAASPSSSPVACISSKIVTRPQRLNLQASHPKLADVADPESEADENEQVSAV