Details from NCBI annotation

Gene Symbol Pdlim4
Gene Name PDZ and LIM domain 4, transcript variant X1
Entrez Gene ID 101723285

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDLIM4 ENSCPOG00000027520 (Guinea pig)

Gene Details

PDZ and LIM domain 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020469, Guinea pig)

Protein Percentage 67.28%
CDS Percentage 74.21%
Ka/Ks Ratio 0.46654 (Ka = 0.268, Ks = 0.5745)

PDLIM4 ENSG00000131435 (Human)

Gene Details

PDZ and LIM domain 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000253754, Human)

Protein Percentage 64.63%
CDS Percentage 70.33%
Ka/Ks Ratio 0.34944 (Ka = 0.2978, Ks = 0.8523)

Pdlim4 ENSMUSG00000020388 (Mouse)

Gene Details

PDZ and LIM domain 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000018755, Mouse)

Protein Percentage 63.0%
CDS Percentage 67.38%
Ka/Ks Ratio 0.27294 (Ka = 0.3138, Ks = 1.1495)

Pdlim4 ENSRNOG00000050794 (Rat)

Gene Details

PDZ and LIM domain 4 (Pdlim4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064261, Rat)

Protein Percentage 62.69%
CDS Percentage 67.07%
Ka/Ks Ratio 0.28296 (Ka = 0.3218, Ks = 1.1372)

Genome Location

Sequence Coding sequence

Length: 1032 bp    Location: 39840237..39826590   Strand: -
>XM_004836624.1
ATGTCCCACTCGGTGACCCTGCGCGGCCCTTCGCCCTGGGGCTTCCGCCTGGTGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCGCGGGTCCATGCTGGCAGCAAGGCCGCGCTGGCTGCTCTGTGTCCCGGAGACCTGATCCAGGCTATCAATGGTGAGAGCACAGAGCTCATGACGCACCTGGAGGCGCAGAACCGCATCAAAGGCTGCCACGATCACCTCACGCTCTCTGTGAGCAGGCCTGACAGCAGGAGCTGGCCCGGTGCCGCTGATGACAAAGCCCAGGCGTACCGGATTCACATCGACTCTGAGGCCCAGGATGGCAGTCCAGTGAGCAGCAGGCGGCCCTCAGCCAGCACCATTGGGCCGGAAGACATGAGACCAAGCCTGGGATGTCCATACGGGCAGTCACCTCGTCTTCCAGTCCCTCAGAATGGCAGCAGCAGTGAGGCCTCCCTGCCCGCACAGATGAACACCCTGCACGTGTCTCCACCCCCCAGCGCTGATCCAGCCAGAGGCCTCCCACGCAGCCTCGACTGCAGAGTGGACCTGGGCTCGGAGGTGTACAGGATGCTTAGGGATCCTGGAGAGCCGTCGACTGTGGAGCCCAAGCAGTCAGGCTCCTTCCGCTACTTGCAGGGCATGCTAGAGGCCGGCGAGGGCGGTAAGACTCCCCACTCCCGAGGCGCATCCCTCCGACCTGCCAGCCCTCTGCCCCCAACTCCACTCCCCAAACTTCCCCCAGTCTCGGTGCGGATGGCCCGAGAAGCAACGCCCTGCAGAAATGGAGGTCTGACCTCCTCCCTGGGCTCATCCCACCGGTGCTTCGGTTTCAGGGGAGCGGCCTGGACCTGGCGGCCCCCGGAACCTCAAGCCCACAGCCAGCAAGCTGGGCACTCCGCTGAGCGGCCTGCAGGGACTGCCGGGGTGCACACGCTGTGGCCATGGGATCGTGGGCACGATCGTCAAGGCCCGGGACAAGCTCTACCATCCAGAGTGCTTCATGTGCAGCGACTGCGGCCTTAA

Related Sequences

XP_004836681.1 Protein

Pdlim4 PREDICTED: PDZ and LIM domain protein 4 isoform X1 [Heterocephalus glaber]

Length: 343 aa      View alignments
>XP_004836681.1
MSHSVTLRGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKGCHDHLTLSVSRPDSRSWPGAADDKAQAYRIHIDSEAQDGSPVSSRRPSASTIGPEDMRPSLGCPYGQSPRLPVPQNGSSSEASLPAQMNTLHVSPPPSADPARGLPRSLDCRVDLGSEVYRMLRDPGEPSTVEPKQSGSFRYLQGMLEAGEGGKTPHSRGASLRPASPLPPTPLPKLPPVSVRMAREATPCRNGGLTSSLGSSHRCFGFRGAAWTWRPPEPQAHSQQAGHSAERPAGTAGVHTLWPWDRGHDRQGPGQALPSRVLHVQRLRP