Sequence details NCBI ID: XM_004836616.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slc22a5
Gene Name solute carrier family 22 (organic cation/carnitine transporter), member 5, transcript variant X1
Entrez Gene ID 101720927

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC22A5 ENSCPOG00000005459 (Guinea pig)

Gene Details

solute carrier family 22 (organic cation/carnitine transporter), member 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004915, Guinea pig)

Protein Percentage 92.45%
CDS Percentage 90.73%
Ka/Ks Ratio 0.11294 (Ka = 0.0392, Ks = 0.3472)

SLC22A5 ENSG00000197375 (Human)

Gene Details

solute carrier family 22 (organic cation/carnitine transporter), member 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000245407, Human)

Protein Percentage 89.15%
CDS Percentage 89.28%
Ka/Ks Ratio 0.17148 (Ka = 0.0598, Ks = 0.3486)

Slc22a5 ENSRNOG00000008432 (Rat)

Gene Details

solute carrier family 22 (organic cation/carnitine transporter), member 5 (Slc22a5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011340, Rat)

Protein Percentage 85.66%
CDS Percentage 85.05%
Ka/Ks Ratio 0.15876 (Ka = 0.0864, Ks = 0.544)

Genome Location

Sequence Coding sequence

Length: 1635 bp    Location: 39727474..39697043   Strand: -
Raw sequence   
>XM_004836616.1
ATGCGGGACTACGAGGAGGTGACCGCCTTCCTGGGCGAGTGGGGGCCCTTCCAGCGCCTCGTCTTCTTCCTGCTCAGCGCCAGCATCATCCCCAATGGCTTCAATGGGATGTCGTTTGTGTTCCTGGCGGGGTCCCCGGAGCACCGCTGCCGGGTTCCGGACGCCGCGAACCTGAGCAGCGCGTGGCGCAACCACAGCATCCCGCTGCTGCTGCGCGACGGCCGCGAGGTGCCCGACGGCTGCCGCCGCTACCGGCTCGCCACCATCGCCAACTTCTCCGCGCTCGGGCTGGAGCCGGGGCGCGACGTGGAGCTGGGGCAGCTGGAGCAGGAGCGCTGCCTGGATGGCTGGGAGTTCAGCCAGGACGTCTTCCAGTCCACCATCGTGACCGAGTGGAACCTGGTGTGTGAGGACGACTGGAAGACCCCGCTCTGCATGTCCTTGTTTTTCGTTGGTGTCCTAGTGGGCTCCTTCATTTCAGGGCAGCTCTCAGACAGGTTTGGTCGGAAGAATGTGCTGTTTGTGACCATGGGCATGCAGACTGGCTTCAGCTTACTGCAGGTCTTCTCAAAGAACTTTGAGATGTTCACGGTGCTCTTCGTCCTTGTTGGCATGGGCCAGATCTCCAACTACGTGGCAGCATTTGTCCTGGGAACAGAAATCCTTGGCAAGTCAATTCGTATTATATTTGCCACGCTAGGAGTGTGCATATTTTTTGCATTTGGCTTCATGCTCCTGCCACTGTTGGCTTACTTCATCAGAGATTGGCGGATGCTGCTGCTGTCACTGACGTTGCCTGGGGTGTTGTGTGCGGCACTCTGGTGGTTCATCCCAGAGTCCCCGCGATGGCTCATCTCGCAGGGGCGATTCGAGGAGGCAGAAGTGATCATCCGCAAGGCTGCCAAAATCAATGGGATTGTGGCACCCTCCACCATCTTCGACCCGAGTGAGTTACAAGATCTGAGTTCCACGAAGCAGCAGTCCCACCACATTCTGGATCTGCTCCGAACCCGGAACATCCGAATCGTCACTATCATGTCCATAATTCTGTGGATGACCATATCAGTGGGCTACTTTGGACTTTCCCTTGATACTCCTAACCTGCATGGAGACATCTATGTGAACTGCTTTCTTTCTGCGGTGGTCGAAGTTCCAGCATATGTGTTGGCCTGGCTCCTGCTGCAGTATGTGCCCCGGCGCTATTCCTTGGCCACTGCTCTCTTCCTGGGCGGCAGTGTCCTTCTCTTCGTGCAGCTGGTGCCCCCAGACTTATATTACTTGTCTACAGTCCTGGTGATGGTGGGCAAGTTTGGAATCACTGCTGCCTTCTCCATGGTCTATGTGTACACAGCTGAGCTGTATCCCACAGTGGTCCGAAACATGGGTGTGGGGGTCAGCTCCACAGCATCCCGCCTTGGCAGCATCCTGTCTCCCTACTTCGTTTACCTTGGTGCCTATGACCGCTTCCTGCCCTACATTCTCATGGGAAGTCTGACCATCCTGACAGCCATCCTCACCTTGTTCTTGCCAGAGAGCTTCGGTGCCCCTCTCCCAGACACCATTGACCAGATGCTAAGGGTCAAAGGAGTCCTGAGACACACCCCTGAAGATGTCATCTCAAGAAGATGGATCTAA

Related Sequences

XP_004836673.1 Protein

Slc22a5 PREDICTED: solute carrier family 22 member 5 isoform X1 [Heterocephalus glaber]

Length: 544 aa      
>XP_004836673.1
MRDYEEVTAFLGEWGPFQRLVFFLLSASIIPNGFNGMSFVFLAGSPEHRCRVPDAANLSSAWRNHSIPLLLRDGREVPDGCRRYRLATIANFSALGLEPGRDVELGQLEQERCLDGWEFSQDVFQSTIVTEWNLVCEDDWKTPLCMSLFFVGVLVGSFISGQLSDRFGRKNVLFVTMGMQTGFSLLQVFSKNFEMFTVLFVLVGMGQISNYVAAFVLGTEILGKSIRIIFATLGVCIFFAFGFMLLPLLAYFIRDWRMLLLSLTLPGVLCAALWWFIPESPRWLISQGRFEEAEVIIRKAAKINGIVAPSTIFDPSELQDLSSTKQQSHHILDLLRTRNIRIVTIMSIILWMTISVGYFGLSLDTPNLHGDIYVNCFLSAVVEVPAYVLAWLLLQYVPRRYSLATALFLGGSVLLFVQLVPPDLYYLSTVLVMVGKFGITAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFLPESFGAPLPDTIDQMLRVKGVLRHTPEDVISRRWI