Details from NCBI annotation

Gene Symbol Irf1
Gene Name interferon regulatory factor 1, transcript variant X2
Entrez Gene ID 101719873

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IRF1 ENSCPOG00000004848 (Guinea pig)

Gene Details

interferon regulatory factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004363, Guinea pig)

Protein Percentage 94.48%
CDS Percentage 92.54%
Ka/Ks Ratio 0.08429 (Ka = 0.0258, Ks = 0.3055)

IRF1 ENSG00000125347 (Human)

Gene Details

interferon regulatory factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000245414, Human)

Protein Percentage 92.0%
CDS Percentage 90.67%
Ka/Ks Ratio 0.09504 (Ka = 0.036, Ks = 0.3788)

Irf1 ENSMUSG00000018899 (Mouse)

Gene Details

interferon regulatory factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104548, Mouse)

Protein Percentage 85.28%
CDS Percentage 84.46%
Ka/Ks Ratio 0.10765 (Ka = 0.0753, Ks = 0.6995)

Irf1 ENSRNOG00000008144 (Rat)

Gene Details

interferon regulatory factor 1 (Irf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010968, Rat)

Protein Percentage 85.58%
CDS Percentage 85.38%
Ka/Ks Ratio 0.11016 (Ka = 0.0714, Ks = 0.6478)

Genome Location

Sequence Coding sequence

Length: 981 bp    Location: 39596970..39603428   Strand: +
>XM_004836615.1
ATGCCCATCACTCGGATGCGCATGAGACCCTGGCTAGAGATGCAGATTAATTCCAACCAAATCCCAGGGCTGATCTGGATTAATAAAGAGGAGATGATCTTCCAGATCCCGTGGAAACATGCGGCCAAGCATGGCTGGGACATCAATAAGGATGCCTGTCTCTTCCGCAGCTGGGCCATTCATACAGGCCGATACAAAGCAGGGGAAAAGGAGCCAGATCCCAAGACGTGGAAGGCAAACTTTCGCTGTGCCATGAACTCCCTGCCAGACATTGAGGAGGTGAAGGACCAGAGCAGGAACAAGGGCAGCTCAGCTGTTCGGGTGTACCGGATGCTCCCACCTCTCACTAAGAACCAGAGGAAAGAGAGAAAGTCCAAGTCCAGCCGTGACACCAAGAGCAAGGCCAGGAGGAAGTCATGTGGGGATTCCAGCCCTGACGCATTCTCCGATGGACTCAGCAGCTGCACCCTGCCTGACGATCACAGCAGCTACACAGCTCAGGCCTACCTGGGGCAGGACCTGGATGGGGAGCGGGCCCTTACTCCAGCGCTGTCGCCATGTGCCATCAGTAGCACTCTCCCAGACTGGCACCTGCCAGTGGAAATCATGCCAGATAGCACCAGTGACCTGTACAACTTCCAGGTGTCACCCATGCCTTCCACGTCTGAAGCTGCAACAGACGAGGATGAGGAAGGGAAGATCCCAGAGGACATCATGAAGCTCTTGGAGCAGTCAGAGTGGCAGCCCACAAATGTGGATGGGAAGGGGTACCTGCTCAATGAACCTGGAGCTCAGCCTGCATCTGTCTATGGAGACTTCAGCTGCAAGGAGGAGCCAGAAACTGACAGCCCTGCGGGTGATATTGGGCTGAGCCTACACCGTGTCTTCACAGATCTGAGGAACATGGACCCCAGCTGGCTGGACAGCATGCTCACCCCAGTCAGGCTGCCCTCCATCCAGGCCATTCCTTGTGCACCGTAG

Related Sequences

XP_004836672.1 Protein

Irf1 PREDICTED: interferon regulatory factor 1 isoform X2 [Heterocephalus glaber]

Length: 326 aa      View alignments
>XP_004836672.1
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQRKERKSKSSRDTKSKARRKSCGDSSPDAFSDGLSSCTLPDDHSSYTAQAYLGQDLDGERALTPALSPCAISSTLPDWHLPVEIMPDSTSDLYNFQVSPMPSTSEAATDEDEEGKIPEDIMKLLEQSEWQPTNVDGKGYLLNEPGAQPASVYGDFSCKEEPETDSPAGDIGLSLHRVFTDLRNMDPSWLDSMLTPVRLPSIQAIPCAP