Sequence details NCBI ID: XM_004836571.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Phf15
Gene Name PHD finger protein 15, transcript variant X12
Entrez Gene ID 101702240

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF15 ENSCPOG00000008323 (Guinea pig)

Gene Details

PHD finger protein 15

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007481, Guinea pig)

Protein Percentage 93.23%
CDS Percentage 91.05%
Ka/Ks Ratio 0.07629 (Ka = 0.0315, Ks = 0.4126)

PHF15 ENSG00000043143 (Human)

Gene Details

PHD finger protein 15

External Links

Gene Match (Ensembl Protein ID: ENSP00000378451, Human)

Protein Percentage 93.52%
CDS Percentage 89.24%
Ka/Ks Ratio 0.0649 (Ka = 0.0341, Ks = 0.5249)

Phf15 ENSMUSG00000020387 (Mouse)

Gene Details

PHD finger protein 15

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020655, Mouse)

Protein Percentage 90.22%
CDS Percentage 85.87%
Ka/Ks Ratio 0.06882 (Ka = 0.0499, Ks = 0.7243)

Phf15 ENSRNOG00000004956 (Rat)

Gene Details

PHD finger protein 15 (Phf15), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045638, Rat)

Protein Percentage 89.73%
CDS Percentage 86.19%
Ka/Ks Ratio 0.07473 (Ka = 0.051, Ks = 0.6821)

Genome Location

Sequence Coding sequence

Length: 2496 bp    Location: 37783803..37743418   Strand: -
Raw sequence   
>XM_004836571.1
ATGGAAGAGAAGAGGCGAAAATACTCTATCAGCAGCGACAACTCGGACACCAGTGACAGTCACGCCACATCCACTTCCGCTTCAAGATGTTCCAAACTGCCCAGCAGCACCAAGTCGGGCTGGCCCCGGCAGAACGAAAAGAAGCCGTCAGAGGTTTTCCGAACAGACTTGATCACAGCCATGAAGATCCCGGATTCCTACCAGCTCAGCCCAGATGACTACTACGTCCTGGCAGACCCGTGGCGGCAGGAATGGGAGAAAGGTGTGCAGGTGCCCGCAGGAGCAGAGGCCATCCCGGAGCCTGTGGTGAGGATCCTCCCACCACTGGAAGGCCCCCCTGCGCAGGTGTCCCCAGACAACTCCGCCCTCAGTGAAGCCTCCCAGCCCATGTGGCCTGGGGGCAGCCGCTATGACCTGGACGAAATTGACGCCTACTGGCTAGAGCTCATCAACTCCGAGCTCAAGGAGATGGAGAGGCCCGGGCTGGACGAGCTGACGCTAGAGCGTGTGCTGGAGGAACTGGAAACTTTGTGCCACCAGAATATGGCACGGGCCATCGAGACACAGGAGGGGCTTGGCATCGAGTATGACGAGGATGTTGTCTGTGACGTGTGCCGGTCCCCCGAGGGGGAGGACGGCAACGAGATGGTTTTCTGTGACAAGTGCAATGTCTGTGTACACCAGGCCTGCTACGGGATCCTTAAGGTGCCCACGGGCAGCTGGCTATGCCGGACATGTGCCCTGGGAGTCCAGCCAAAGTGCCTGCTCTGCCCTAAGCGAGGAGGAGCCTTGAAGCCCACCAGAAGTGGGACCAAGTGGGTGCATGTCAGCTGCGCCCTGTGGATTCCTGAGGTCAGCATTGGATGCCCCGAGAAGATGGAGCCCGTCACCAAGATCTCCAGTATCCCAGCCAGCCGCTGGGCGCTGTCCTGCAGCCTGTGCAAGGAGTGCACGGGCACCTGCATCCAGTGTTCCATGCCTTCCTGCGTCACAGCATTCCACGTCACATGCGCCTTTGACCATGGCCTGGAAATGCGGACTATACTAGCAGACAACGACGAGGTCAAGTTCAAGTCCTTCTGCCAGGAGCACAGTGATGGCCCGAGAAGCCAGCCCCCCTCCGAGCCAGTGGAGTCCAGCCAGGCCGGCGAAGACCTGGAAAAGGTGACTTTGCGCAAACAGCGGCTGCAGCAGCTGGAAGAAGACTTCTACGAGCTGGTGGAGCCCGCCGAGGTTGCTGAGCGGCTGGAGCTGGCTGAGGCACTGGTCGACTTCATCTACCAGTACTGGAAGCTGAAGAGGAAGGCCAATGCCAACCAGCCACTGCTGACACCCAAGACAGACGAGGTGGACAACCTTGCCCAGCAGGAGCAGGACGTCCTCTACCGCCGCCTGAAGCTCTTCACACACCTGCGGCAGGACCTGGAGAGGGTTAGGAATCTGTGCTACATGGTGACGAGGCGTGAGCGAACCAAGCACGCCATCTGCAAGCTCCAGGAGCAGATCTTCCACCTGCAGATGAAGCTTATCGAGCAGGACCTGTGTCGAGAGCAAGCCGGGAGGAGAGCCAAGGGCAAGAAGAGCGACTCCAAGAGGAAAGGCCGGGAGGGTCCCAAGGGCAGCAGCCCGGAGAAGAAAGAGAAAGTGAAGGCCGGGCCCGACTCGGTCCTGGGGCAGCTGGGCCTGAGCACCTCGTTCCCCATCGACGGCACCTTCTTCAATAGCTGGCTGGCGCAGTCGGTGCAGATCACGGCAGAGGACATGGCCATGAGCGAGTGGTCGCTGAACAACGGACACCGCGAGGACCCCGCGCCAGGCCTGCTGTCGGAGGAGCTGCTGCAGGACGAGGAGACGCTGCTCAGCTTCATGCGGGATCCCTCGCTGCGAGCCGGCGACCCGGCCAGGAAGGCCCGGGGCCGCAGCCGCCTGCCTGCCAAGAAGAAGCCCCCGCCCCTGCAGGATGGACCTGGCTCTCGGACGACTCCAGAAAAGGCCCCCAGGAAGCCCTGGGGCCTGGATGTAGGCAGCGGCAAAGCGGGGCAAGGGCCACCTGCCAGGAAGCCACCTCGGCGGACGTCTGCTCACTTGCCGTCCAGCCCTGCAGCTGGGGATTGTCCCATTCCTGCAGCCCCAGAAAGCCCCCCGCCACTGGCCCCCGAGACCCTGGACGAGGCAGCCCTAGTAGCTGCTGACTCGAATGTCCAAGTGCCTGGCCCTATGGTGAGCCCCAAGCCCTTGGGCCGGCTCCGGCCACCCCGTGAGAGCAAGGTCACCCGGAGATCGCCGGGTGCCAGGCCCGATGCAGGGACAGGACCGCCTGCTCCCGTGGCCGAGAGGCCACAGGTCGGCCTGCACTTTGACGCGGAGGCTGATGGCTACTTCTCTGACGGGGAGTTGAGCGACTCGGAGGCAGAGGCAGAGGACGGCGGGGTGCAGCGGGGGTCCCGGGAGGCGGGGGCTGAGGAGGTGGTCCGCATGGGGGTCCTGGCCTCCTAA

Related Sequences

XP_004836628.1 Protein

Phf15 PREDICTED: protein Jade-2 isoform X12 [Heterocephalus glaber]

Length: 831 aa      View alignments
>XP_004836628.1
MEEKRRKYSISSDNSDTSDSHATSTSASRCSKLPSSTKSGWPRQNEKKPSEVFRTDLITAMKIPDSYQLSPDDYYVLADPWRQEWEKGVQVPAGAEAIPEPVVRILPPLEGPPAQVSPDNSALSEASQPMWPGGSRYDLDEIDAYWLELINSELKEMERPGLDELTLERVLEELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVFCDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKCLLCPKRGGALKPTRSGTKWVHVSCALWIPEVSIGCPEKMEPVTKISSIPASRWALSCSLCKECTGTCIQCSMPSCVTAFHVTCAFDHGLEMRTILADNDEVKFKSFCQEHSDGPRSQPPSEPVESSQAGEDLEKVTLRKQRLQQLEEDFYELVEPAEVAERLELAEALVDFIYQYWKLKRKANANQPLLTPKTDEVDNLAQQEQDVLYRRLKLFTHLRQDLERVRNLCYMVTRRERTKHAICKLQEQIFHLQMKLIEQDLCREQAGRRAKGKKSDSKRKGREGPKGSSPEKKEKVKAGPDSVLGQLGLSTSFPIDGTFFNSWLAQSVQITAEDMAMSEWSLNNGHREDPAPGLLSEELLQDEETLLSFMRDPSLRAGDPARKARGRSRLPAKKKPPPLQDGPGSRTTPEKAPRKPWGLDVGSGKAGQGPPARKPPRRTSAHLPSSPAAGDCPIPAAPESPPPLAPETLDEAALVAADSNVQVPGPMVSPKPLGRLRPPRESKVTRRSPGARPDAGTGPPAPVAERPQVGLHFDAEADGYFSDGELSDSEAEAEDGGVQRGSREAGAEEVVRMGVLAS