Sequence details NCBI ID: XM_004836541.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gria1
Gene Name glutamate receptor, ionotropic, AMPA 1, transcript variant X4
Entrez Gene ID 101724828

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GRIA1 ENSCPOG00000003811 (Guinea pig)

Gene Details

glutamate receptor, ionotropic, AMPA 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003440, Guinea pig)

Protein Percentage 99.29%
CDS Percentage 93.81%
Ka/Ks Ratio 0.0112 (Ka = 0.0033, Ks = 0.2913)

GRIA1 ENSG00000155511 (Human)

Gene Details

glutamate receptor, ionotropic, AMPA 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000428994, Human)

Protein Percentage 99.26%
CDS Percentage 92.97%
Ka/Ks Ratio 0.01037 (Ka = 0.0034, Ks = 0.3298)

Gria1 ENSMUSG00000020524 (Mouse)

Gene Details

glutamate receptor, ionotropic, AMPA1 (alpha 1)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044494, Mouse)

Protein Percentage 97.53%
CDS Percentage 88.66%
Ka/Ks Ratio 0.02202 (Ka = 0.0141, Ks = 0.6384)

GRIA1 ENSRNOG00000045816 (Rat)

Gene Details

Glutamate receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064722, Rat)

Protein Percentage 87.16%
CDS Percentage 82.51%
Ka/Ks Ratio 0.118 (Ka = 0.0911, Ks = 0.7718)

Genome Location

Sequence Coding sequence

Length: 2436 bp    Location: 35512874..35337086   Strand: -
Raw sequence   
>XM_004836541.1
ATGCTGACTTCCTTCTGTGGAGCCCTCCATGTATGCTTCATCACGCCAAGCTTTCCTGTAGACACTTCCAATCAGTTTGTCCTCCAGCTGCGCCCTGAACTGCAGGATGCCCTCATCAGCATCATCGACCATTACAAGTGGCAGAAATTTGTCTACATTTATGATGCTGACCGGGGTTTGTCCGTCCTGCAGAAAGTCCTGGACACAGCTGCAGAAAAGAACTGGCAAGTGACAGCAGTCAACATTTTGACAACCACAGAGGAAGGATACCGGATGCTCTTTCAGGACCTGGAGAAGAAGAAGGAGCGGCTGGTGGTGGTGGACTGTGAATCAGAACGCCTCAACGCCATCTTGGGCCAGATTATAAAGCTGGAGAAGAATGGCATTGGCTACCACTACATGCTTGCCAACCTGGGCTTCATGGACATTGACTTAAATAAATTCAAGGAGAGTGGGGCAAACGTGACAGGTTTCCAGCTGGTGAACTACACAGATACCATCCCAGCCAAGATCATGCAGCAGTGGAAGAACAGCGATGCCAGAGACCACACCCGGGTGGACTGGAAGAGACCCAAGTACACCTCTGCGCTCACCTATGATGGGGTGAAGGTCATGGCGGAGGCTTTCCAGAGCCTACGGAGGCAGAGGATTGATATATCTCGCCGGGGGAACGCTGGGGACTGTCTGGCAAACCCAGCTGTGCCTTGGGGTCAGGGAATCGACATCCAGAGAGCCCTGCAGCAGGTGCGATTCGAAGGTCTGACCGGAAACGTGCAGTTTAATGAGAAAGGGCGCCGGACCAACTACACCCTCCATGTGATCGAAATGAAACATGATGGCATCCGGAAGGTCGGCTACTGGAACGAAGATGATAAGTTTGTCCCTGCAGCCACTGATGCTCAAGCCGGCGGGGACAACTCCAGTGTTCAGAACAGGACATATATCGTCACTACCATCCTAGAGGATCCTTATGTGATGCTCAAGAAGAATGCCAACCAGTTTGAGGGAAATGACCGCTACGAGGGCTACTGTGTAGAGCTGGCAGCAGAGATTGCCAAGCATGTGGGCTACTCCTACCGTCTTGAGATTGTCAGCGATGGGAAATACGGAGCCCGAGATCCTGACACAAAGGCCTGGAATGGCATGGTGGGAGAGCTGGTTTATGGAAGAGCAGATGTGGCCGTGGCCCCCTTAACTATCACCTTGGTTCGGGAAGAGGTTATAGACTTCTCCAAGCCATTTATGAGTTTGGGTATCTCCATCATGATTAAAAAGCCACAGAAGTCCAAGCCAGGAGTATTTTCCTTCCTCGATCCTTTGGCTTATGAGATTTGGATGTGCATCGTTTTTGCCTACATTGGAGTGAGCGTCGTCCTCTTCCTGGTCAGTCGCTTCAGCCCCTATGAGTGGCACAGCGAAGAGTTTGAGGAAGGACGAGACCAGACAACCACTGACCAATCAAATGAGTTTGGGATATTCAACAGCTTGTGGTTCTCCCTGGGAGCCTTCATGCAGCAAGGATGTGACATTTCTCCCAGGTCCCTGTCCGGACGCATCGTCGGTGGGGTCTGGTGGTTCTTCACCTTGATTATCATCTCCTCCTATACCGCCAATCTGGCTGCCTTCCTGACTGTGGAGAGGATGGTGTCTCCCATCGAGAGTGCAGAGGACCTAGCAAAGCAGACAGAAATCGCCTATGGGACCCTAGAAGCAGGATCCACGAAGGAGTTCTTCAGGAGATCTAAAATTGCTGTGTTTGAGAAGATGTGGACATACATGAAGTCGGCAGAACCATCGGTTTTTGTGAGGACCACAGAGGAGGGGATGATCCGAGTGAGGAAATCCAAAGGCAAATATGCCTACCTCCTAGAGTCCACCATGAATGAATATATAGAGCAGCGGAAACCCTGTGACACCATGAAAGTGGGAGGTAACTTGGATTCCAAAGGCTATGGCATTGCGACACCCAAGGGGTCCGCCCTGAGAAATCCAGTAAACCTGGCAGTGTTAAAACTGAACGAGCAGGGGCTTTTGGACAAATTGAAAAACAAATGGTGGTACGACAAGGGCGAGTGCGGCAGCGGGGGAGGTGATTCCAAGGACAAGACAAGTGCTCTGAGCCTCAGCAATGTGGCAGGCGTGTTCTACATCCTGATCGGAGGACTTGGACTAGCTATGCTGGTTGCCTTAATCGAGTTCTGCTACAAATCCCGTAGTGAATCCAAGCGGATGAAGGGTTTCTGTTTGATCCCACAGCAATCCATCAATGAAGCCATAAGGACATCGACCCTCCCTCGAAACAGCGGAGCCGGAGCCAATGGCAGCGGCAGTGGAGAGAATGGCCGGGTGGTCAGCCATGACTTCCCCAAGTCCATGCAATCAATCCCCTGCATGAGCCACAGTTCAGGGATGCCCTTGGGAGCCACGGGATTATAA

Related Sequences

XP_004836598.1 Protein

Gria1 PREDICTED: glutamate receptor 1 isoform X4 [Heterocephalus glaber]

Length: 811 aa      View alignments
>XP_004836598.1
MLTSFCGALHVCFITPSFPVDTSNQFVLQLRPELQDALISIIDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIIKLEKNGIGYHYMLANLGFMDIDLNKFKESGANVTGFQLVNYTDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKVGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTTDQSNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMKGFCLIPQQSINEAIRTSTLPRNSGAGANGSGSGENGRVVSHDFPKSMQSIPCMSHSSGMPLGATGL