Sequence details NCBI ID: XM_004836500.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sgcd
Gene Name sarcoglycan, delta (35kDa dystrophin-associated glycoprotein), transcript variant X2
Entrez Gene ID 101712896

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGCD ENSCPOG00000003738 (Guinea pig)

Gene Details

sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003375, Guinea pig)

Protein Percentage 97.58%
CDS Percentage 95.5%
Ka/Ks Ratio 0.07668 (Ka = 0.0114, Ks = 0.149)

SGCD ENSG00000170624 (Human)

Gene Details

sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSP00000338343, Human)

Protein Percentage 96.89%
CDS Percentage 93.08%
Ka/Ks Ratio 0.05994 (Ka = 0.0149, Ks = 0.2487)

Sgcd ENSMUSG00000020354 (Mouse)

Gene Details

sarcoglycan, delta (dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000076459, Mouse)

Protein Percentage 95.85%
CDS Percentage 92.16%
Ka/Ks Ratio 0.08122 (Ka = 0.0219, Ks = 0.2695)

Sgcd ENSRNOG00000002372 (Rat)

Gene Details

sarcoglycan, delta (dystrophin-associated glycoprotein)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003224, Rat)

Protein Percentage 85.12%
CDS Percentage 84.43%
Ka/Ks Ratio 0.24777 (Ka = 0.1076, Ks = 0.4344)

Genome Location

Sequence Coding sequence

Length: 870 bp    Location: 33259553..32660191   Strand: -
Raw sequence   
>XM_004836500.1
ATGCCTCAGGAACAGTACACACACCACCGGAGCACCATGCCCAGCTCTGAGGGGCCACAGGTATACAAAGTGGGGATTTACGGCTGGCGGAAACGATGCCTGTATTTCTTTGTCCTGCTCCTCATGATTTTAATATTGGTGAACCTGGCCATGACCATCTGGATTCTCAAAGTCATGAACTTCACAATTGATGGAATGGGAAATCTGAGAATCACAGAAAAAGGTCTAAAGCTAGAAGGAGACTCAGAATTCTTACAACCTCTCTACGCCAAAGAAATCCAGTCCCGACCAGGTAATGCCCTATACTTCAAATCTGCCAGAAATGTGACAGTGAACATTCTCAATGATCAGACTAAAGTGCTAACTCAGCTGATAACAGGTCCAAAAGCTGTAGAAGCTTATGGCAAAAAGTTTGAAGTAAAAACAGTTTCTGGAAAATTGCTCTTCTCTGCAGATGACAAGGAAGTGGTGGTAGGAGCTGAGAGATTAAGAGTTTTAGGAGCTGAAGGTACAGTTTTCCCTAAGTCTATAGAAACACCTAATGTCAGGGCAGACCCCTTCAAGGAACTAAGATTGGAGTCCCCAACCCGGTCTCTGGTTATGGAGGCCCCAAAAGGAGTACAAATAAATGCAGAAGCCGGCAACATGGAAGCCACCTGCAGAACCGAGCTGAGACTGGAATCCAAAGATGGAGAGATTAAGTTAGATGCTGCGAAAATCAAGCTACCTAGACTGCCTCACGGATCCTACTCACCCACAGGGACGAGGCAGAAGGTCTTCGAGGTCTGCGTCTGCGCCAACGGGAGACTGTTCCTGTCCCAGGCAGGAACCGGTTCCACTTGTCAGATAAACACAAGTGTCTGCCTTTGA

Related Sequences

XP_004836557.1 Protein

Sgcd PREDICTED: delta-sarcoglycan-like isoform X2 [Heterocephalus glaber]

Length: 289 aa      View alignments
>XP_004836557.1
MPQEQYTHHRSTMPSSEGPQVYKVGIYGWRKRCLYFFVLLLMILILVNLAMTIWILKVMNFTIDGMGNLRITEKGLKLEGDSEFLQPLYAKEIQSRPGNALYFKSARNVTVNILNDQTKVLTQLITGPKAVEAYGKKFEVKTVSGKLLFSADDKEVVVGAERLRVLGAEGTVFPKSIETPNVRADPFKELRLESPTRSLVMEAPKGVQINAEAGNMEATCRTELRLESKDGEIKLDAAKIKLPRLPHGSYSPTGTRQKVFEVCVCANGRLFLSQAGTGSTCQINTSVCL