Details from NCBI annotation

Gene Symbol Lsm11
Gene Name LSM11, U7 small nuclear RNA associated
Entrez Gene ID 101705581

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM11 ENSCPOG00000000906 (Guinea pig)

Gene Details

LSM11, U7 small nuclear RNA associated

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000816, Guinea pig)

Protein Percentage 96.24%
CDS Percentage 92.64%
Ka/Ks Ratio 0.06835 (Ka = 0.0178, Ks = 0.2611)

LSM11 ENSG00000155858 (Human)

Gene Details

LSM11, U7 small nuclear RNA associated

External Links

Gene Match (Ensembl Protein ID: ENSP00000286307, Human)

Protein Percentage 91.85%
CDS Percentage 89.89%
Ka/Ks Ratio 0.12608 (Ka = 0.039, Ks = 0.309)

Lsm11 ENSMUSG00000044847 (Mouse)

Gene Details

U7 snRNP-specific Sm-like protein LSM11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000117531, Mouse)

Protein Percentage 91.55%
CDS Percentage 85.26%
Ka/Ks Ratio 0.06206 (Ka = 0.0415, Ks = 0.6683)

Lsm11 ENSRNOG00000005450 (Rat)

Gene Details

LSM11, U7 small nuclear RNA associated (Lsm11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007267, Rat)

Protein Percentage 91.24%
CDS Percentage 86.06%
Ka/Ks Ratio 0.07242 (Ka = 0.0429, Ks = 0.5919)

Genome Location

Sequence Coding sequence

Length: 1071 bp    Location: 31730777..31720854   Strand: -
>XM_004836480.1
ATGGAGGAGCGGGAGCGGGGGGCGAGGTCGGCTCGCGCCGGGAGCCCCGCAAGCCCGCCCAGCCCGCGGCTGGATGTCAGCTCAGACAGCTTCGACCCGCTGCTGGCCCTGTACGCGCCCCGCCTGCCTCCCATCCCCTACCCCAATGCCCCCTGCTTCAACAACCTGGCGGAGTATGAGAGCTTCCTCAGGACCGGCAGCCGGGGCGGCGGGCGCGGGCGGGCNNNNNNGGCCCCCGCTGCCGCCGCCGCCGCCGCCGGAACCTCGGGCCGGACCCGCCGCCGGGCGGACGCCCCCGCCCCGGACCCCGAGCGCATCCAGCGCCTCCGTCGCCTCATGGTGGTCAAGCAGGAAGAGGATGGCACGGCCGGGGCGTCCCGGCGGGGACCGGGTCGCAGCCGGAAGGCGCCGCGCAACGTGCTCACGCGAATGCCCCTGCACGAAGGCAGCCCTCTGGGTGAACTCCACCGTTGTATCCGGGAGGGGGTGAAGGTGAATGTGCATATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCTCGTAGCATTTGACAAGTTCTGGAATATGGCACTTACTGATGTGGATGAGACCTACAGAAAACCTGTTCTAGGCAAAGCATACGAGCGGGATTCTTCGTTGACTCTCACAAGGCTGTTTGATCGGCTGAAACTACAGGATTCCTCCAAAAAGGAAGCAGATTCGAAGTCTGCAGTTGAAGACTCCACTCTGTCCAGATACTCGCAGACATCAACTTGGAAGGTGGCTTCCGTGTGGGGAAGAGGAGACACTGACCGAAGCTCTCACAGGCGTTCCCATTCCGTTCCTTCTTCCCTGCAGGCCTCTGCTAGGGAGGAGTCCAGGTCCGAGCTGTCAGGGAGGACTACAAGGACAGAAGGGTCCAGTGTGGGAGGTACCTTTTCCAGGGCCACCACCCTTTCCCAGGGCCAGCCCCGTAAGAAAAAGCGAAAGCCCAAGGTGGATTACCAGCAGGTATTCACTCGACACATAAATCAGATTTTCATTCGAGGTGAGAATGTGTTGCTGGTTCATCTTGCACAGTAA

Related Sequences

XP_004836537.1 Protein

Lsm11 PREDICTED: U7 snRNA-associated Sm-like protein LSm11 [Heterocephalus glaber]

Length: 356 aa      View alignments
>XP_004836537.1
MEERERGARSARAGSPASPPSPRLDVSSDSFDPLLALYAPRLPPIPYPNAPCFNNLAEYESFLRTGSRGGGRGRAXXAPAAAAAAAGTSGRTRRRADAPAPDPERIQRLRRLMVVKQEEDGTAGASRRGPGRSRKAPRNVLTRMPLHEGSPLGELHRCIREGVKVNVHIRTFKGLRGVCTGFLVAFDKFWNMALTDVDETYRKPVLGKAYERDSSLTLTRLFDRLKLQDSSKKEADSKSAVEDSTLSRYSQTSTWKVASVWGRGDTDRSSHRRSHSVPSSLQASAREESRSELSGRTTRTEGSSVGGTFSRATTLSQGQPRKKKRKPKVDYQQVFTRHINQIFIRGENVLLVHLAQ