Details from NCBI annotation

Gene Symbol Clint1
Gene Name clathrin interactor 1, transcript variant X2
Entrez Gene ID 101704961

Database interlinks

Part of NW_004624733.1 (Scaffold)

For more information consult the page for NW_004624733.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLINT1 ENSCPOG00000000908 (Guinea pig)

Gene Details

clathrin interactor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000818, Guinea pig)

Protein Percentage 93.42%
CDS Percentage 93.63%
Ka/Ks Ratio 0.22583 (Ka = 0.0377, Ks = 0.1671)

CLINT1 ENSG00000113282 (Human)

Gene Details

clathrin interactor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000429824, Human)

Protein Percentage 96.95%
CDS Percentage 95.08%
Ka/Ks Ratio 0.08511 (Ka = 0.0144, Ks = 0.1696)

Clint1 ENSMUSG00000006169 (Mouse)

Gene Details

clathrin interactor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104883, Mouse)

Protein Percentage 94.54%
CDS Percentage 89.73%
Ka/Ks Ratio 0.06636 (Ka = 0.028, Ks = 0.4224)

Clint1 ENSRNOG00000005406 (Rat)

Gene Details

clathrin interactor 1 (Clint1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030596, Rat)

Protein Percentage 94.49%
CDS Percentage 88.35%
Ka/Ks Ratio 0.06073 (Ka = 0.0307, Ks = 0.5057)

Genome Location

Sequence Coding sequence

Length: 1875 bp    Location: 31612445..31693277   Strand: +
>XM_004836479.1
ATGTTGAACATGTGGAAGGTGCGGGAGCTGGTGGACAAAGCCACCAATGTGGTTATGAATTATTCAGAGATTGAGTCTAAGGTTCGAGAAGCAACGAATGATGATCCTTGGGGACCTTCTGGGCAACTCATGGGAGAGATTGCCAAGGCTACATTTATGTATGAACAATTTCCAGAACTTATGAACATGCTGTGGTCCCGAATGTTAAAAGACAACAAAAAGAATTGGAGAAGAGTCTATAAGTCATTGCTGCTCCTAGCTTACCTCATAAGAAATGGATCAGAGCGTGTTGTTACAAGTGCCAGAGAACACATTTATGATTTGCGATCCTTGGAAAATTACCACTTTGTAGATGAACACGGCAAGGATCAAGGTATAAATATTCGCCAGAAGGTGAAGGAATTGGTTGAATTTGCCCAGGATGACGACAGGCTTCGTGAAGAGCGAAAAAAAGCAAAGAAGAACAAAGACAAGTATGTTGGGGTTTCCTCAGACAGTGTTGGAGGATTCAGATACAGTGAAAGATATGATCCTGAACCCAAATCAAAATGGGATGAGGAGTGGGATAAAAACAAGAGTGCTTTTCCATTCAGTGATAAATTAGGTGAACTGAGTGATAAAATTGGAAGCACAATTGATGACACCATCAGCAAGTTCCGGAGGAAAGATAGAGAAGACTCTCCAGAAAGATGCAGTGACAGTGATGAGGAAAAGAAAGCAAGAAGAGGCAGATCTCCCAAAGGTGAATTCAAAGATGAAGAAGAAACTGTGACAACAAAGCATATCCATATCACACAGGCCACAGAGACCACCACAACTAGACACAAGCGCACCGCAAATCCTTCCAAAACCATTGATCTTGGAGCCGCAGCACATTACACAGGAGAGAAAGCAAGTCCAGATCAGAATGCTTCAACCCACACACCTCAGTCTTCAGTTAAGACTTCAGTGCCTAGCAGCAAGTCATCTGGTGACCTTGTTGATCTGTTTGATGCCACCAGCCAGTCACCAGCAGGAGGATCAGCTGATTTATTTGGGGGATTTGCTGACTTTGGCTCAGCTGCTGCATCAGGCAGTTTCCCTTCCCAAGCAACAAGTGGGAATGGAGACTTTGGTGACTGGAGTGCCTTCAACCAAGCCCCATCCGGCCCTGTTGCTTCCAGTGGTGAGCTCTTCGGCAGTGCCTCCCAGCCAGCAGTAGAACTTGTCAGTGGTTCACAGCCAGCTTTAGGGCCACCTCCAACTGCCTCAAATTCTTCAGACCTGTTTGATCTTATGGGCTCATCCCAAGCAACTATGACATCTTCCCAGAGTATGAATTTCTCTTTGATGAGCACTAATACTGTAGGACTTGGTTTGCCCTTATCAAGATCACAGAATACAGATATGGTCCAGAAATCAGTCAGCAAAACCCTGCCTTCTACTTGGTCTGACCCCAGCGTAAACATCAGCCTAGACAACTTGCTACCTGGTATGCAGCCTGCCAAACCCCAGCAGCCATCGCTCAATACAATGATTCAACAACAGAATATGCAACAGCCTCTGAATGTGATGACTCAAAGTTTTGGAGCTGTGAACCTCAGTTCTCCATCAAATATGCTTCCTGTTCGGCCACAAACTAACACTTTGCTGGGGGGACCCATGCCTATGAGTATGCCCAATGTGATGACTGGCACCATGGGAATGACCCCTCTGGGCAATGCTCCAATGATGAACCAGGGCATGATGGGCATGAACATGAACATAGGGGTGTCAACTGCTGGGATGGGCTTGACAGGCACAATGAGAATGGGCATGCCCAACATGGCCATGACTTCTGGAACTGTGCAGCCTAAGCAAGATGCCTTTGCAAATTTCGCCAACTTCAGCAAATAG

Related Sequences

XP_004836536.1 Protein

Clint1 PREDICTED: clathrin interactor 1 isoform X2 [Heterocephalus glaber]

Length: 624 aa      View alignments
>XP_004836536.1
MLNMWKVRELVDKATNVVMNYSEIESKVREATNDDPWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGINIRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVSSDSVGGFRYSERYDPEPKSKWDEEWDKNKSAFPFSDKLGELSDKIGSTIDDTISKFRRKDREDSPERCSDSDEEKKARRGRSPKGEFKDEEETVTTKHIHITQATETTTTRHKRTANPSKTIDLGAAAHYTGEKASPDQNASTHTPQSSVKTSVPSSKSSGDLVDLFDATSQSPAGGSADLFGGFADFGSAAASGSFPSQATSGNGDFGDWSAFNQAPSGPVASSGELFGSASQPAVELVSGSQPALGPPPTASNSSDLFDLMGSSQATMTSSQSMNFSLMSTNTVGLGLPLSRSQNTDMVQKSVSKTLPSTWSDPSVNISLDNLLPGMQPAKPQQPSLNTMIQQQNMQQPLNVMTQSFGAVNLSSPSNMLPVRPQTNTLLGGPMPMSMPNVMTGTMGMTPLGNAPMMNQGMMGMNMNIGVSTAGMGLTGTMRMGMPNMAMTSGTVQPKQDAFANFANFSK